--- Log opened Tue Apr 12 00:00:01 2011
--- Day changed Tue Apr 12 2011
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01:35 < dbolser> fenn: woop!
01:35 < dbolser> want to see my DNA?
01:35 < dbolser> (but I signed up 6 of my family)
01:37 < dbolser> 13:31 < fenn> ok i see. you weren't running a http proxy at all
01:37  * dbolser doesn't follow
01:45 < Utopiah> for the record I tried the proxy and it worked
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03:50 < dbolser> ++
03:50 < dbolser> did you try scripting against it using Perl LWP or so?
03:50 < dbolser> (its on my todo list)
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07:30 < JayDugger> Good morning, everyone.
07:30 < JayDugger> Does 23andMe run another sale?
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09:34 < dbolser> he missed the sale
09:34 < kanzure> I'm a lumberjack and I don't care,
09:35 < kanzure> I work all night and sleep all day,
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11:16 < kanzure> http://diybiodublin-eorg.eventbrite.com/
11:16 < kanzure> whay?
11:16 < kanzure> http://www.slideshare.net/BrianDegger/whay-2011-will-be-the-year-that-diybio-takes-off
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11:30 < dmb_> hello
11:30 < dmb_> anyone messing with bifx.org?
11:30 < dmb_> -bash: fork: Resource temporarily unavailable
11:30 -!- dmb_ is now known as Guest81161
11:30 < Guest81161> all I get when I log in
11:30 < Guest81161> bah
11:30 -!- Guest81161 is now known as faceface
11:30  * faceface goes to #linux to ask what could be the cause
11:31 < faceface> I just set an scp in motion for the 30 Gb JMB tar.gz
11:31 < faceface> heh... its back
11:32 < faceface> let me see if I can break it again
11:33  * faceface is agast
11:33 < faceface> scping this file seems to bork it
11:34 < kanzure> Linux dallas0.bioinformatics.org 2.6.9-89.0.19.ELsmp #1 SMP Fri Jan 8 06:32:22 EST 2010 i686 athlon i386 GNU/Linux
11:35 < kanzure> seems to only be 2 GB of RAM
11:36 < jebba> kanzure is that PAE kernel?
11:38 < kanzure> what is PAE?
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11:40 < faceface> kanzure I think it's a disk space issue
11:41 < faceface> the scp may try to map the required disk when it initiates, and there is a pathetic amount available
11:41 < faceface> did you copy all the dumps that I created?
11:41 < faceface> I'm tempted to delete them if so
11:42 < faceface> not that this fixes the problem
11:42 < kanzure> i didn't copy THC.tar.gz
11:43 < kanzure> i have: ADDR.tar.gz  DDTDM.tar.gz  DDTT.tar.gz  Nano.tar.gz
11:43 < faceface> can I torrent it easily direct from bio.cc?
11:43 < kanzure> what?
11:43 < faceface> sorry, bifx.org
11:44 < jebba> kanzure i686/i386 needs PAE kernel to see more than 2 gigs on system. Red Hat, Inc. pushes a kernel-PAE package.   (That is, if you know it has physically like 4G, that could be the issue)
11:44 < faceface> well... if we start seeding it, and if you and I both pick it up...
11:44 < kanzure> faceface: jebba's comment seems to make sense
11:44 < faceface> I guess its a virtual box
11:44 < faceface> but the disk space is the killer
11:45 < jebba> though i thought the -smp kernel was also PAE, but maybe there's -smp-PAE or somesuch.
11:45 < kanzure> faceface: you can split it up into multiple files if you want
11:45 < kanzure> check out `split`
11:45 < faceface> kanzure I grabbed that one for you, so let me know how you want it
11:45 < kanzure> i think tar or gzip can also split an archive up into multiple files
11:46 < kanzure> faceface: oops, i have it
11:46 < kanzure> sorry, i put it somewhere else and forgot
11:46 < faceface> cool
11:50 < faceface> kanzure, got somewhere I can put 30Gb of the Journal of Molecular Biology?
11:50 < kanzure> yes
11:50 < faceface> includes the first protein structures
11:50 < faceface> where?
11:51 < kanzure> jrayhawk: what's the best way to do this? should he get an account on cysteine for a while?
11:52 < kanzure> faceface: jrayhawk will suggest something in a bit
11:53 < kanzure> faceface: one of the servers i use is managed by jrayhawk and has some advantages
11:53 < faceface> excellent
11:53 < faceface> I've got to go just now, but dbolser will be lurking
11:53 < faceface> night
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20:49 < kanzure> more singularity crazyness: http://www.listbox.com/member/archive/11983/2011/04/sort/time_rev/page/1/entry/0:20/20110412234056:1CA55EB8-6580-11E0-8E37-B34411800BF9/
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--- Log closed Wed Apr 13 00:00:10 2011