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01:36 < archels> paperbot: http://www.turingbirds.com/temp/PNAS-2014-Tang-Schomer-13811-6.pdf
01:36 < archels> Bioengineered functional brain-like cortical tissue
01:39 < paperbot> http://diyhpl.us/~bryan/papers2/paperbot/6fea1adc36a7ec6002b6769d51a2c566.pdf
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07:51 < kanzure> justanotheruser: thank you for the assistance
07:55 < kanzure> archels: nice
07:55 < kanzure> beep boop https://github.com/BitGo/BitGoJS/pull/3
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09:26 < kanzure> .title http://joncave.co.uk/2014/08/bitcoin-sighash-single/
09:26 < yoleaux> Exploiting Bitcoin's SIGHASH_SINGLE signature type | Jon Cave
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10:17 < kanzure> https://thepiratebay.se/torrent/11113511/Cryptome_archive_2014-06-02
10:18 < kanzure> magnet:?xt=urn:btih:F5763EB5C5FFD8B40B9047CF72350D320A59BDAC&dn=cryptome-archive-2014-06-02&tr=udp%3a%2f%2ftracker.istole.it%3a80
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10:38 < archels> paperbot: http://www.maneyonline.com/doi/pdfplus/10.1179/2045772313Y.0000000128
10:39 < paperbot> http://diyhpl.us/~bryan/papers2/paperbot/73a773c7576041570daf5aaeab57d593.txt
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10:48 < archels> paperbot: http://www.sciencedirect.com/science/article/pii/S0025619614001451
10:49 < archels> does anyone know a good, recent paper on exoskeletons/neuroprostheses?
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10:50 < paperbot> http://diyhpl.us/~bryan/papers2/paperbot/%0A%20Brain%20Machine%20Interface%20and%20Limb%20Reanimation%20Technologies%3A%20Restoring%20Function%20After%20Spinal%20Cord%20Injury%20Through%20Development%20of%20a%20Bypass%20System%0A%20.txt
10:51 < archels> .head http://www.sciencedirect.com/science/article/pii/S2212671614000699/pdf?md5=f0674a23f3a317ebf09eef557d3b005b&pid=1-s2.0-S2212671614000699-main.pdf
10:51 < yoleaux> 503, text/html, 177 bytes
10:55 < archels> kanzure: can you even grab a static pdf link from sciencedirect pages any more?
10:55 < archels> or do you need to run some bullshit javascript
10:56 < kanzure> paperbot is presently running bullshit javascript
10:56 < kanzure> through zotero and firefox :(
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13:31 < kanzure> yo gene_hacker
13:31 < gene_hacker> yo
13:32 < kanzure> anything new
13:32 < kanzure> gene_hacker: http://verbnurbs.com/
13:33 < gene_hacker> ewww... javascript
13:33 < kanzure> but it works
13:33 < kanzure> and it's well-tested
13:33 < kanzure> has (public) unit tests
13:33 < kanzure> and well-written. for javascript, at least.
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13:40 < kanzure> drosophila gpu neuroscience stuff http://neurokernel.github.io/
13:40 < kanzure> https://github.com/neurokernel/neurokernel
13:41 < kanzure> "Neurokernel is a Python framework for developing models of the fruit fly brain and executing them on multiple NVIDIA GPUs."
13:41 < kanzure> hrmm
13:41 < kanzure> https://github.com/neurokernel/neurokernel/tree/master/examples
13:42 < kanzure> archels_: so is this supposed to be a biologically accurate rendering of.. what exactly? https://github.com/neurokernel/neurokernel/blob/master/examples/vision/visualize_output.py
13:42 < kanzure> "vision_output.avi"
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13:59 < archels_> oh, yeah, I spoke to that guy at INCF Neuroinfo last month
14:00 < archels_> they had two posters on it
14:01 < archels_> the drosophila brain can apparently be subdivided into a lot of mostly independent modules, so they could get away with a simulator that doesn't focus too much on communication
14:02 < kanzure> okay then
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14:08 < delinquentme> KANZURE
14:08 < delinquentme> I PMd yew
14:08 < delinquentme> jew.
14:09 < delinquentme> we're not texting swee nothing anymore
14:09 < archels_> .title https://www.youtube.com/watch?v=fwQx1OUltx4
14:09 < yoleaux> Aurel A Lazar - Neurokernal: Emulating the drosophila brain on multiple GPUs (2014) - YouTube
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14:33 < archels_> kanzure: do you know of any efforts involving DNA or RNA sequencing at different locations of an in vitro slice?
14:33 -!- archels_ is now known as archels
14:33 < kanzure> different locations?
14:34 < kanzure> so.. shotgun?
14:34 < kanzure> also, ask ParahSailin
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14:35 < kanzure> see http://gnusha.org/logs/2014-09-27.log
14:37 < archels> well, let's say you have some adjacent neurons whose cell bodies were captured in a particular slice
14:37 < archels> I am wondering whether it is possible to independently sequence those cells
14:37 < archels> (for a very wide definition of 'sequence')
14:37 < kanzure> someone had a clever way of doing mrna sequencing and sampling based on patch clamp
14:38 < kanzure> by clever i guess i mean the obvious ways
14:40 < kanzure> wasn't there someone doing in vivo sequencing? hrm
14:46 < archels> how would that work?
14:46 < archels> I'm not having much success finding anything
14:48 < archels> in-situ PCR? is that a thing?
14:50 < archels> paperbot: http://www.nature.com/nprot/journal/v2/n11/full/nprot.2007.395.html
14:50 < paperbot> http://libgen.org/scimag/get.php?doi=10.1038%2Fnprot.2007.395
14:51 < archels> .botsnack
14:51 < yoleaux> :D
14:51 < archels> not you
14:56 < archels> here we go
14:56 < archels> paperbot: http://www.nature.com/nbt/journal/v32/n6/pdf/nbt.2921.pdf
14:57 < paperbot> http://diyhpl.us/~bryan/papers2/paperbot/d8b992d59e1021978a5c934be273109c.txt
14:58 < archels> "A spatially localized subsampling of the transcriptome"
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15:06 < archels> paperbot: http://turingbirds.com/temp/nbt.2921.pdf
15:07 < paperbot> http://diyhpl.us/~bryan/papers2/paperbot/b81e76865ca51310f8c133d21011f0a3.pdf
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15:26 < jrayhawk> there's single-molecule sequencing, but i don't know of anything in-vivo
15:29 < kanzure> "Your search - Intitle:"in vivo" - did not match any articles."
15:29 < kanzure> google is really going down the shitter
15:30 < kanzure> oh, it capitalized it on me? why
15:34 < kanzure> "That's not possible without deterministic signing, which OpenSSL does not support afaik."
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17:27 < ParahSailin> archels: you arent going to sequence genome from one cell of dna
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17:27 < ParahSailin> cdna amplification of some sort?
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21:14 < kanzure> hm
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22:52 < kanzure> so, eureqa was never open source
22:52 < kanzure> pasky: you should make a eureqa with fenn
22:56 < kanzure> 1188 bookmarks
22:57 < kanzure> .title http://mangafox.me/manga/akumetsu/v11/c091/16.html
22:57 < yoleaux> Akumetsu 91 v11 - Read Akumetsu 91 Online - Page 16
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--- Log closed Sun Sep 28 00:00:53 2014