--- Log opened Fri Apr 01 00:00:16 2016
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06:52 < kanzure> .title https://www.youtube.com/watch?v=2aX-0E07Fpg
06:52 < yoleaux> Hash Proof Systems, Old and New - YouTube
06:52 < kanzure> .title https://www.youtube.com/watch?v=3EM5lAdAGM0
06:52 < yoleaux> Bitcoin lightning C implementation test 2016-03-31 - YouTube
06:53 < kanzure> delinquentme: show us nanotube catalysis papers and things
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07:09 < kanzure> fenn: on that topic, i think that the reasoning and arguments shown on the scihub site are actually sort of weak. almost would be better to not say anything at all.
07:13 < kanzure> https://engineuring.wordpress.com/2016/03/11/sci-hub-is-a-goal-changing-the-system-is-a-method/
07:15 < kanzure> https://engineuring.wordpress.com/2016/02/24/why-sci-hub-is-the-true-solution-for-open-access-reply-to-criticism/
07:17 < kanzure> "Another article, the link to which I lost, was by a small publisher arguing that Sci-Hub will do harm not to big publishers like Elsevier, but to scholarly societies or non-profits that depend on subscription income. I wonder: what kind of non-profit is that that depends on commercial subscription sales?"
07:17 < kanzure> .... except many non-profits have commercial products, duh. non-profit doesn't mean "no revenue".
07:17 < kanzure> i think she needs someone else to step in and write all of her rhetoric, because she is not good at this part
07:29 < kanzure> https://github.com/BlueBrain/BluePyOpt --- seems to do some sort of evolutionary search optimization and parameter tuning things for neural network simulations
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07:54 < kanzure> https://github.com/BlueBrain/deap
07:54 < kanzure> "DEAP is a novel evolutionary computation framework for rapid prototyping and testing of ideas. It seeks to make algorithms explicit and data structures transparent. It works in perfect harmony with parallelisation mechanism such as multiprocessing and SCOOP."
07:54 < kanzure> what?
07:54 < kanzure> "Optimisation of a Neocortical Layer 5 Pyramidal Cell" https://github.com/BlueBrain/BluePyOpt/blob/master/examples/l5pc/L5PC.ipynb
07:55 < kanzure> "NeuroM is a Python-based toolkit for the analysis and processing of neuron morphologies" https://github.com/BlueBrain/neurom
07:56 < kanzure> https://github.com/BlueBrain/eFEL
07:56 < kanzure> "The Electrophys Feature Extraction Library (eFEL) allows neuroscientists to automatically extract features from time series data recorded from neurons (both in vitro and in silico). Examples are the action potential width and amplitude in voltage traces recorded during whole-cell patch clamp experiments."
07:56 < kanzure> blue brain project is using nixos
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08:00 < kanzure> "Simulator optimized for large scale neural network simulations" https://github.com/BlueBrain/CoreNeuron
08:07 < kanzure> .... right .. https://github.com/BlueBrain/RESTBridge/blob/88926484f2a49facdb9b006b3bd49da6d3551a6b/.travis.yml#L21
08:08 < kanzure> "neuroscience-related unit tests" https://github.com/BlueBrain/neuronunit
08:08 < kanzure> "Features tested: voltage threshold: the upper limit of the threshold for dendritic spike initiation (an expected somatic depolarization at wich step like dV/dt increase occur) proximal threshold distal threshold degree of nonlinearity at threshold suprathreshold degree of nonlinearity peak derivative of (somatic voltage) at threshold peak amplitude of somatic EPSP time to peak of somatic EPSP degree of nonlinearity in the case of ...
08:09 < kanzure> ... asynchronous inputs (A. Losonczy and J. C. Magee (2006) Neuron, 50: 291-307)"
08:09 < archels> kanzure: the older posts on Elbakyan's blog are much more interesting
08:09 < kanzure> hm? show..
08:09 < archels> https://engineuring.wordpress.com/
08:09 < archels> 3rd and down
08:10 < kanzure> this is from when i met her at harvard https://engineuring.wordpress.com/2010/06/14/mind-implants-or-how-to-expand-consciousness-using-new-technologies/
08:18 < kanzure> a rather long general intro to cryonics http://waitbutwhy.com/2016/03/cryonics.html
08:28 < kanzure> https://petertodd.org/2016/btcc-funding
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08:59 < kanzure> "A Bitcoin Standard: Lessons from the Gold Standard" http://www.bankofcanada.ca/2016/03/staff-working-paper-2016-14/
09:11 < kanzure> "Agile in-litero experiments: how can semi-automated information extraction from neuroscientific literature help neuroscience model building?" http://infoscience.epfl.ch/record/215862/files/EPFL_TH6809.pdf?version=1
09:11 < kanzure> "An integrated NLP model is designed to automatically extract brain region connectivity statements from very large corpora. This system is applied to a large corpus of 25M PubMed abstracts and 600K full-text articles. Central to this system is the creation of a searchable database of brain region connectivity statements, allowing neuroscientists to gain an overview of all brain regions connected to a given region of interest."
09:12 < kanzure> "The database is evaluated by neuroanatomists on real connectomics tasks (targets of Nucleus Accumbens) and results in significant effort reduction in comparison to previous manual methods (from 1 week to 2h)."
09:12 < kanzure> "... and find over 500K unique neuron type mentions"
09:14 < kanzure> "Physically-based in silico light sheet microscopy for visualizing fluorescent brain models" http://infoscience.epfl.ch/record/215873/files/1471-2105-16-S11-S8.pdf?version=1
09:14 < kanzure> check out page 9 figure 6
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16:07 < nmz787_i> yo
16:07 < kanzure> hi
16:07 < nmz787_i> sup
16:08 < nmz787_i> bitcoin transactions went through sometime later that night
16:08 < nmz787_i> or the next morning, i'm not sure
16:08 < nmz787_i> lesson learned, don't pay uncharacteristically-low  transaction fees
16:09 < nmz787_i> also, why isn't there anyone local interested in home-brew microfluidics/DNA
16:09 < nmz787_i> this DIY thing is starting to become isolating
16:11 < nmz787_i> also, I ordered one of those diyoupcb laser head kits
16:12 < nmz787_i> so now I just have to figure out how to get it jammed above this XY gantry, and see if I can hook things up to grbl
16:13 < nmz787_i> but that kit can control all 3 lasers in the optical head, as well as report autofocus values, and drive the focus coils
16:14 < kanzure> you could whore yourself out to the homebrew microelectronics people since the equipment is basically the same
16:14 < kanzure> instead of talking about fluidics talk about electron flow or something, you'll blend in
16:15 < nmz787_i> I think they'll catch on too soon, with the biotech equipment strewn about
16:15 < kanzure> actually i'm not so sure
16:16 < nmz787_i> I think I need to just start having kids ASAP
16:16 < nmz787_i> and in ~5 years they can start doing things for me
16:17 < nmz787_i> my own 'great wall of science (focused towards microfluidics and DNA)'
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16:53 < kanzure> who wants to tell nmz787 that he can get labor-capable 5 year-olds without waiting 5 years? or how long do you think it will take him to realize his mistake.
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17:48 < wrldpcmbl> Heh
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21:50 < maaku> nmz787 thinks a five year old child is going to do what he says hahahaha
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--- Log closed Sat Apr 02 00:00:17 2016