2010-06-18.log

--- Day changed Fri Jun 18 2010
-!- elevenarms [~elevenarm@71.22.122.198] has joined #hplusroadmap00:00
-!- elevenarms [~elevenarm@71.22.122.198] has quit [Client Quit]00:00
-!- cluckj [cluckj@cpe-72-231-169-163.nycap.res.rr.com] has quit [Read error: Connection reset by peer]00:02
-!- cluckj [cluckj@cpe-72-231-169-163.nycap.res.rr.com] has joined #hplusroadmap00:02
-!- streety [~Jonathan@host86-174-98-55.range86-174.btcentralplus.com] has joined #hplusroadmap00:20
-!- streety [~Jonathan@host86-174-98-55.range86-174.btcentralplus.com] has quit [Ping timeout: 265 seconds]00:29
-!- genehacker [~notanemai@cpe-66-68-104-134.austin.res.rr.com] has quit [Ping timeout: 264 seconds]03:06
-!- mheld [~mheld@c-71-232-51-121.hsd1.ma.comcast.net] has joined #hplusroadmap04:02
-!- klafka [~klafka@cpe-66-66-5-254.rochester.res.rr.com] has joined #hplusroadmap04:22
-!- klafka [~klafka@cpe-66-66-5-254.rochester.res.rr.com] has quit [Quit: This computer has gone to sleep]04:38
-!- cluckj [cluckj@cpe-72-231-169-163.nycap.res.rr.com] has quit [Read error: Connection reset by peer]04:45
-!- cluckj [cluckj@cpe-72-231-169-163.nycap.res.rr.com] has joined #hplusroadmap04:45
-!- genehacker [~notanemai@cpe-66-68-104-134.austin.res.rr.com] has joined #hplusroadmap05:03
-!- genehacker [~notanemai@cpe-66-68-104-134.austin.res.rr.com] has quit [Ping timeout: 260 seconds]05:17
-!- klafka [~klafka@cpe-66-66-5-254.rochester.res.rr.com] has joined #hplusroadmap05:19
-!- cluckj [cluckj@cpe-72-231-169-163.nycap.res.rr.com] has quit [Read error: Connection reset by peer]05:23
-!- cluckj [sors@cpe-72-231-169-163.nycap.res.rr.com] has joined #hplusroadmap05:23
-!- cluckj [sors@cpe-72-231-169-163.nycap.res.rr.com] has quit [Read error: Connection reset by peer]05:25
-!- cluckj [cluckj@cpe-72-231-169-163.nycap.res.rr.com] has joined #hplusroadmap05:25
-!- pmetzger [~pmetzger@237.sub-75-194-140.myvzw.com] has joined #hplusroadmap05:43
-!- marainein [~marainein@220-253-25-202.VIC.netspace.net.au] has quit [Quit: Ex-Chat]05:56
-!- dustbin [~chatzilla@adsl-71-145-162-129.dsl.austtx.sbcglobal.net] has quit [Read error: Connection reset by peer]06:03
-!- dustbin [~chatzilla@adsl-71-145-162-129.dsl.austtx.sbcglobal.net] has joined #hplusroadmap06:03
-!- dustbin [~chatzilla@adsl-71-145-162-129.dsl.austtx.sbcglobal.net] has quit [Read error: Connection reset by peer]06:08
-!- dustbin [~chatzilla@adsl-71-145-162-129.dsl.austtx.sbcglobal.net] has joined #hplusroadmap06:09
-!- genehacker [genehacker@w-mob400-128-62-218-51.public.utexas.edu] has joined #hplusroadmap06:40
-!- genehacker [genehacker@w-mob400-128-62-218-51.public.utexas.edu] has quit [Ping timeout: 276 seconds]06:48
-!- strages [~strages@c-76-29-243-225.hsd1.al.comcast.net] has quit [Read error: Connection reset by peer]06:53
-!- strages [~strages@c-76-29-243-225.hsd1.al.comcast.net] has joined #hplusroadmap06:59
-!- splicer [~foo@92.39.2.19] has quit []07:00
-!- TigerRage [~Tiger@ip68-11-187-208.br.br.cox.net] has joined #hplusroadmap07:02
-!- mheld [~mheld@c-71-232-51-121.hsd1.ma.comcast.net] has quit [Quit: mheld]07:18
-!- JayDugger [~duggerj@pool-173-74-76-197.dllstx.fios.verizon.net] has joined #hplusroadmap07:30
AJollyLifeugh. my blood sugar is really high this morning, 112 :(. no idea why either07:42
-!- pmetzger [~pmetzger@237.sub-75-194-140.myvzw.com] has left #hplusroadmap []07:43
-!- mheld [~mheld@216.214.247.202] has joined #hplusroadmap07:44
-!- splicer [~patrik@h68n1c1o261.bredband.skanova.com] has joined #hplusroadmap07:51
-!- eridu [debian-tor@gateway/tor-sasl/eridu] has joined #hplusroadmap08:04
LilxHKsome fructose intake?08:06
-!- TigerRage [~Tiger@ip68-11-187-208.br.br.cox.net] has quit [Ping timeout: 276 seconds]08:09
kanzurehttp://kaggle.com/blog/2010/06/17/%EF%BB%BFwhat-has-bioinformatics-ever-done-for-us08:18
kanzurehttp://www.sciencecentric.com/news/10061750-citizen-science-birders-contribute-valuable-data-on-invasive-plant-species.html08:20
kanzurehttp://johnohab.com/2010/06/17/washington-state-of-the-science/08:20
kanzurehttp://www.boingboing.net/2010/06/17/pescos-talk-from-ted.html08:20
kanzurehttp://olyopen.wordpress.com/2010/06/17/plastics-summit-draws-a-crowd/08:20
kanzurestalk: Maureen McConnell08:21
kanzurehttp://raptureofthedeep.org/index.php/2010/06/17/citizen-scientist/08:21
kanzurepacific biosciences getting funding: http://www.prnewswire.com/news-releases/gen-probe-makes-50-million-strategic-investment-in-third-generation-sequencing-company-pacific-biosciences-96591544.html08:23
kanzureheh: http://celebritydiagnosis.com/ "presents famous patients as medical lessons"08:25
kanzureoh, ozzy08:25
kanzurehttps://www.dtmi.duke.edu/news-publications/updates/the-path-to-personalized-medicine-nejm-perspective08:25
kanzurepodcast on personalized medicine: http://castroller.com/podcasts/MelbourneUniversityUp2/1694522-Episode%2095%20Personalized%20Medicine%20Treatments%20Tailored%20to%20Your%20Unique%20Genetic%20Profile08:25
kanzurehttp://www.prx.org/pieces/47636-the-era-of-personalized-medicine08:26
kanzure23andme hitting fox news: http://www.foxnews.com/story/0,2933,594830,00.html08:26
kanzuresay, when did navigenics show up on the scene? as far as i know, 23andme and decodeme are the main bosses08:27
kanzurere: what has bioinformatics ever done for us:08:28
kanzure10:28 < kanzure> Oort: awf-edwards08:28
kanzure10:28 < Oort> Modern practitioners have too much data and are engaged in a theory-free reduction of it under the neologism 'bioinformatics'.08:28
kanzureGlobal and local fMRI signals driven by neurons defined optogenetically by type and wiring http://designfiles.org/papers/neuro/Global%20and%20local%20fMRI%20signals%20driven%20by%20neurons%20defined%20optogenetically%20by%20type%20and%20wiring.pdf08:33
kanzurejason bobe and woodrow wilson center are going to be doing some "biosafety" stuff.. not sure what though08:49
kanzurehey what was that dopamine-based fMRI reporter that mikhail shapiro at hplus summit was talking about?08:50
kanzureDirected evolution of a magnetic resonance imaging contrast agent for noninvasive imaging of dopamine08:50
kanzurehttp://designfiles.org/papers/neuro/Directed%20evolution%20of%20a%20magnetic%20resonance%20imaging%20contrast%20agent%20for%20noninvasive%20imaging%20of%20dopamine.pdf08:51
kanzurehttp://scienceblogs.com/neurotopia/2010/06/what_does_that_mri_signal_mean.php08:53
-!- genehacker [genehacker@wireless-128-62-237-187.public.utexas.edu] has joined #hplusroadmap09:03
eriduNext Big Future's RSS subscribers doubled to 12,000 in the last year09:06
eriduat this rate, all of the US will be subscribe to Next Big Future by 202309:07
eriduand the entire world by about 203009:08
-!- genehacker [genehacker@wireless-128-62-237-187.public.utexas.edu] has quit [Ping timeout: 248 seconds]09:16
-!- eridu [debian-tor@gateway/tor-sasl/eridu] has quit [Ping timeout: 245 seconds]09:22
-!- genehacker [~notanemai@cpe-66-68-104-134.austin.res.rr.com] has joined #hplusroadmap09:23
AJollyLiferandom thought of the day, should deathrow inmates be allowed to sign up for cryonics?09:31
uniqanomalyif they accept redesign of their mind routines which led to violence ;)09:34
uniqanomalyafter ressurection09:35
uniqanomalyresurrection*09:35
uniqanomalyaccept redesign before cryo, redesign when technology will be available, and then resurrection, obviously09:37
AJollyLifeworks for me. i also wonder if life insurance pays out in case of the state executing you09:38
uniqanomalylol, nice question09:39
AJollyLifei guess you would have to keep up with paying the premiums09:39
uniqanomaly;)09:40
AJollyLifeim going to have to ask my insurance agent this....although he might look at me funny09:40
uniqanomalyyeah, definitely09:40
AJollyLifei know it pays out in the case of sucide09:40
kiveI think that depends on the policy -- some have anti-suicide clauses, iirc09:46
kiveinteresting question, though09:46
-!- mheld [~mheld@216.214.247.202] has quit [Quit: mheld]09:52
kanzurecool there's an entire article now: http://en.wikipedia.org/wiki/Microfluidic_Sanger_sequencing09:53
AJollyLifekive: i know mine doesn't, i checked before I signed up :)09:54
-!- streety [~Jonathan@host86-174-98-55.range86-174.btcentralplus.com] has joined #hplusroadmap09:54
AJollyLifei belive most companines anti-sucide clauses are for 2 years from the start of the policy09:54
-!- LilxHK [~LilxHK@c906548b.virtua.com.br] has quit [Remote host closed the connection]10:07
-!- lepton [~john@216.sub-75-231-204.myvzw.com] has joined #hplusroadmap10:10
kanzurepyrosequencing has a lot of steps involved10:12
kanzurebut this looks a lot cleaner: http://designfiles.org/papers/Real-time%20DNA%20sequencing%20from%20single%20polymerase%20molecules.pdf10:12
kanzurequalitatively, i'm not sure if it's better than direct DNA sequencing via AFM: http://designfiles.org/papers/AFM-DNA-sequencing/10:15
-!- mheld [~mheld@nomad.ccs.neu.edu] has joined #hplusroadmap10:32
kanzurei don't remember "- Tyson Anderson: Problem Solving: DIYbio and Real World Issues" from hplus summit 200910:41
-!- lepton [~john@216.sub-75-231-204.myvzw.com] has quit [Ping timeout: 240 seconds]11:15
-!- lepton [~john@7.sub-75-220-66.myvzw.com] has joined #hplusroadmap11:17
kanzurehi lepton 11:17
-!- lepton [~john@7.sub-75-220-66.myvzw.com] has quit [Ping timeout: 240 seconds]11:21
-!- lepton [~john@67.sub-75-231-222.myvzw.com] has joined #hplusroadmap11:23
-!- streety [~Jonathan@host86-174-98-55.range86-174.btcentralplus.com] has quit [Ping timeout: 265 seconds]11:27
leptonHey kanzure11:29
leptonSorry my internet drops in and out so much :/11:29
kanzureheh11:29
leptonI was so hopeful for the FCC spectrum auction landing some decent open wireless a few years back11:30
leptonWould be been awesome now...11:30
leptonoh well11:30
kanzuredid you read about the fcc issues re: sirius xm?11:30
leptonI'm still in the midst of converting our CNC over to EMC211:30
leptonHmm, don't think I did11:30
kanzurehttp://satwaves.com/blog/2010/05/02/sirius-xm-delivers-strong-notice-to-the-fcc/11:31
kanzurebasically the protection of sirius xm communications went from 1 khz to 1 millihertz or something11:32
leptonwow11:32
kanzureyeah.. so they started to uh, notice that ;)11:32
leptonyeah!11:32
leptonThis modern world...11:33
kanzuresirius hired a guy named ted rappaport to do a technical analysis and review of the situation11:33
kanzurehttp://fjallfoss.fcc.gov/ecfs/document/view?id=702044279011:33
kanzurei'm going over to his house later today to show him how to use ubuntu :P11:33
leptonTo a certain extent I'd prefer they just reform the whole wireless spectrum mangement so we can get some actual cross contiental open internet11:34
leptonBut it seems like I'm gonna have to colonize my own planet, or something, if I ever want to see open wireless standards11:34
leptonha11:34
leptonDo you happen to have any experience setting up Mesa PCI boards with EMC2?11:35
kanzurefenn: are you around?11:35
leptonthere seems to be a lack of knowledge base with pncconf on the emc irc11:35
kanzurelepton: no, but i literally just bought some mesa boards11:35
leptonwhat'd you get?11:35
fennno11:36
kanzure5i20, 7i37TA, 3x 7i40HV11:36
leptonNice11:36
leptonI've got a 5i2311:36
leptonand a 7i47 and 7i42ta11:37
kanzurethe 5i20 is just flat out awesome11:37
leptonI've gotta get this running by the end of the weekend11:37
leptonHave you run it, yet?11:38
kanzureno, not yet11:38
kanzurei need to get some extra connector wires and stuff from mcmaster or digikey or something11:38
* kanzure wonders where elevenarms is11:38
kanzurethe arm is over at elevenarms' shop with the electronics now11:38
kanzurelast week they tried to deliver the electronics but couldn't because i'm under 21 >_<11:39
leptonOh gosh, I spent probably 20 hours dealing with stupid centronix cable connector madness this week11:39
leptonwell, more like 10, but still11:39
kanzureyeah :(11:39
kanzurei had to find a centronix cable for the laser cutter to work11:39
leptonwouldn't deliver electronics because you're under 21? wtf?11:39
leptona centronix 36 pin mini with ALL PINS? Most only have 34 pins connected11:40
leptonhead-slap11:40
leptonI could have run with 34 pins, but I needed pin 18 for our position quadrature11:40
kanzurewhat are you wiring up to?11:40
leptonVexta AS series stepper drivers11:41
leptonand an HSD 4kW spindle11:41
leptonand a bunch of 24v GPIO for e-stop, limits, etc, etc11:41
kanzureare you using them for anything in particular? 11:41
leptoncoolant and dust collector control, too11:41
kanzurelet's see.. a 4kW spindle.. a few stepper drivers.. i could try to guess the end-result11:41
leptonIt's our existing CNC router11:41
kanzuregiant cnc machine? giant arm? cat food opener?11:41
kanzureah11:41
leptonwe're trying to get away from the horrific mess that is shopbot software11:42
leptonWords cannot describe how awful it is11:42
leptonI'm honestly very surprised they haven't had legal action taken aganist them yet11:42
leptonand I'm not kidding11:42
JayDuggerWorse than mesanet.com's website?11:42
kanzurei haven't used a shopbot yet11:42
kanzurealthough i saw one at a maker faire here in austin11:42
leptonI like Ted Hall, he's a good guy, but I mean, they control the spindle THOUGH THE WINDOWS REGISTRY11:42
kanzurewhat the fuck11:43
kanzureyou must be shitting me11:43
leptonThey got on the MS visual studio train like 10 years ago, and have been stuck there ever since11:43
JayDuggerI don't doubt it. Some things are just too awful to be false.11:43
leptonI'm not shitting you at all11:43
leptonThe sad thing is, that's only the tip of the iceberg11:43
leptonso yeah, EMC2 here we come11:43
leptonAlso, their "Closed loop control" DOESN'T EXIST AT ALL11:44
leptonThey don't have the pins connected to their circuit boards11:44
leptonit is a lie11:44
leptonLIE11:44
kanzurea part of my soul just died and fell off11:44
leptonSorry, I'm kinda sore on the subject rightnow11:44
leptonI don't like paying $25k to control a spindle though the windows registry and get a closed loop control system that doesn't exist at all11:45
leptonand PCBS with right angle traces and no ground pour11:45
leptonand an emergency stop that has to go through the windows registry11:45
JayDuggerReally?11:45
leptonOH YES11:45
kanzurewell, that's better than what i have going on with the laser cutter11:45
kanzureit took us a month to figure out that the on/off switch for the laser is a sham switch11:45
JayDuggerI see your comment about legal action has good reasons.11:45
kanzureit does nothing11:45
leptonYeah, stay the hell away from shopbot software, it's f-ing dangerous11:46
leptonWe lost some good tooling and material to it's F-ups11:46
JayDuggerNo one hurt, I hope.11:46
leptonfortunately not, but if you consider that they have 1000's of systems out there...11:47
JayDuggerYeah, I don't like those odds.11:47
leptonThe saddest part is they are aware of all these problems, we've spent a lot of time talking to them on the phone11:47
leptonbut they don't have the will to move away from XP and visual studio11:48
leptonI think they should be shipping EMC2 systems with their control boxes, with the nice "touchy" touch screen interface, it would fit really well with most of their non-techie user base11:48
leptonThe end user just wants an appliance, XP be damned (imo)11:49
lepton / end shopbot rant :p11:50
AJollyLifekanzure: diy electronics. its the new crack.11:55
leptonIt's my crack, that's for sure :)11:55
kanzurehmm 11:55
kanzuremac cowell just butt-dialed me11:55
JayDuggerbutt-dialed?11:55
kanzurebut i have no idea what he's talking about or who he's with11:55
JayDuggerOh.11:55
kanzureyeah, it's where someone with an iphone or touch screen thing accidentally dials your number11:55
leptonI've been a DIY electronics junkie for several years now, it's just turning into less DIY and more DIWYR (do it with your robot)11:56
kanzurehm now there's a door bell11:56
JayDuggerProbably the FBI...or DHS...or DOD...11:56
JayDuggeror UPS.11:56
kanzureomg he's shopping for clothes :/11:57
kanzurehipster clothes11:57
kanzurehe hung up12:00
kanzureoh well12:00
JayDuggerIs orange a good color for him?12:00
kanzure9min 19sec12:00
AJollyLifeI'm partial to orange ;)12:02
-!- mheld [~mheld@nomad.ccs.neu.edu] has quit [Quit: mheld]12:02
kanzurehttp://www.tokyohackerspace.org/ja/event/taking-back-our-world-the-makehackerspacecreativity-movement-2010-06-1512:03
kanzurehttp://futuresource.trackandmonitormedia.com/?p=59716 "Robots and Dinosaurs - A Hackerspace, mini documentary"12:04
kanzure"I2R BCI Team Receives the Top Prize at International Annual BCI"12:05
kanzurehm there's a "techshop magazine" ?12:05
kanzurefablab+"green" crap: http://www.choicevacuums.com/living-green-blog-posts/digital-design-goes-solar-with-fablab-at-solar-decathlon-europe/12:06
kanzure2 week mechanical engineering course offering for kenyans: http://fellowsblog.kiva.org/2010/06/17/exciting-technology-helping-borrowers-changing-east-africa/12:06
kanzurefablabs at ISTE 2010: http://www.willykjellstrom.com/digital-fabrication-at-iste-2010/12:07
kanzurea website for teachers to integrate digital fabrication / fablab stuff into coursework: http://www.digitalfabrication.org/12:08
kanzurefenn: have you talked with halycon molecular yet?12:10
kanzurecool. i was right :) halycon is doing SEM-based whole genome sequencing12:13
kanzurehttp://www.wipo.int/pctdb/en/wo.jsp?WO=200904644512:13
-!- mheld [~mheld@nomad.ccs.neu.edu] has joined #hplusroadmap12:13
kanzureclaims: http://www.wipo.int/pctdb/en/wo.jsp?WO=2009046445&IA=US2008078986&DISPLAY=CLAIMS12:14
-!- mheld [~mheld@nomad.ccs.neu.edu] has quit [Client Quit]12:14
kanzurehalycon internship opening: http://sfbay.craigslist.org/pen/sci/1785881449.html (although they have other openings)12:15
kanzurehahah you have to have a BS in biology just to run gels? wtf12:15
kanzurehttp://www.genomeweb.com/sequencing/halcyon-molecular-develops-threading-method-sequence-dna-transmission-em12:15
JayDuggerThree years ago Google wanted a Masters to run a scanner for Google Books.12:16
kanzure"individual molecule placement rapid nanotransfer"12:17
kanzure"They are also looking for new methods to speed up the scanning process. It currently takes several hours to get up to 50 images, which cover more than a micrometer of DNA, equivalent to more than 2,000 bases."12:17
kanzurehahah martin bogomolni is having AHS assemble his makerbot for him.. gah12:22
-!- mheld [~mheld@nomad.ccs.neu.edu] has joined #hplusroadmap12:24
-!- mheld [~mheld@nomad.ccs.neu.edu] has quit [Client Quit]12:26
kanzurewhat was the name of the services/engineering company that specialized in total documentation and moving of a factory? something about matrix.. matrices..12:27
kanzure14:29 < _abc_> kanzure: The Red Army took several factories from 'liberated' Eastern Europe back to Russia12:30
-!- TigerRage [~Tiger@ip68-11-187-208.br.br.cox.net] has joined #hplusroadmap12:31
leptonjust got off the phone with Peter at Mesanet, nice guy12:31
leptonI see you're posting in EMC, kanzure12:31
kanzurehttp://matrixti.com/ maybe.. i don't this was it12:36
kanzure*i don't think12:36
drazakmy college summer courses start the monday after my hs graduation :S12:42
-!- genehacker [~notanemai@cpe-66-68-104-134.austin.res.rr.com] has quit [Ping timeout: 248 seconds]12:45
fennwhy would i care about halcyon molecular?12:50
drazakdon't they make some really good shit? or is that someone else12:50
fennfirst of all, i don't get what they're doing that makes it "third gen sequencing" or whatever12:50
fennsecond, faster and faster sequencing is not really a bottleneck right now12:51
fenni mean, having my own genome would be nice, but it's not going to save the world12:52
drazakI like the long read length12:52
-!- genehacker [genehacker@wireless-128-62-237-187.public.utexas.edu] has joined #hplusroadmap12:58
fennthere was a tedxSoMa? wtf13:02
AJollyLifefenn: so what would save the world?13:03
fenn"should deathrow inmates be allowed to sign up for cryonics?" only if we provide free cryonics for action hero cops, as seen in "demolition man"13:03
fennAJollyLife: you know, the usual, AI, nanotech, intelligence enhancement, space colonies13:06
lepton:)13:07
leptonI'm with fenn13:07
leptonas far as that^ list goes13:07
-!- genehacker [genehacker@wireless-128-62-237-187.public.utexas.edu] has quit [Ping timeout: 260 seconds]13:10
fenn"DIWYR" ah yes, add "fembots" to the list13:10
-!- JayDugger [~duggerj@pool-173-74-76-197.dllstx.fios.verizon.net] has quit [Quit: Leaving.]13:12
kanzurefenn: halcyon molecular got money from founder's fund and has a lot of social networking inertia13:15
kanzuretheir actual tech doesn't seem particularly brilliant to me13:15
kanzureand why they cover everything in secrecy is just beyond me..13:15
-!- eridu [debian-tor@gateway/tor-sasl/eridu] has joined #hplusroadmap13:15
-!- genehacker [genehacker@wireless-128-62-133-254.public.utexas.edu] has joined #hplusroadmap13:16
-!- bkero [~freenode@osuosl/staff/bkero] has quit [Read error: Connection reset by peer]13:22
-!- Noahj [~noah@c-24-62-35-233.hsd1.ma.comcast.net] has quit [Quit: Leaving.]13:25
-!- mheld [~mheld@c-71-232-51-121.hsd1.ma.comcast.net] has joined #hplusroadmap13:36
-!- Alystair [Alystair@bas1-toronto10-1279558942.dsl.bell.ca] has joined #hplusroadmap13:49
-!- bkero [~freenode@osuosl/staff/bkero] has joined #hplusroadmap13:50
-!- TigerRage [~Tiger@ip68-11-187-208.br.br.cox.net] has quit [Ping timeout: 240 seconds]13:59
-!- genehacker [genehacker@wireless-128-62-133-254.public.utexas.edu] has quit [Ping timeout: 264 seconds]14:05
-!- genehacker [~notanemai@cpe-66-68-104-134.austin.res.rr.com] has joined #hplusroadmap14:06
-!- lepton [~john@67.sub-75-231-222.myvzw.com] has quit [Ping timeout: 240 seconds]14:09
-!- bkero [~freenode@osuosl/staff/bkero] has quit [Excess Flood]14:10
-!- lepton [~john@156.sub-75-231-147.myvzw.com] has joined #hplusroadmap14:11
-!- bkero [~freenode@osuosl/staff/bkero] has joined #hplusroadmap14:14
fenn"First replicating creature spawned in Conway's Game of  Life" http://bit.ly/99B8CZ (discovered may 18 2010)14:38
fenni wonder why there are no pictures of it14:41
fenni wish there were more things like this http://zedomax.com/blog/wp-content/uploads/2008/06/retractable_extension_cord.jpg14:55
fennall right, here's the game of life replicator video http://brightcove.newscientist.com/services/player/bcpid1873822884?bctid=9649526500115:01
fennblegh15:03
-!- faceface_ [~dmb@cpc6-dund12-0-0-cust234.sgyl.cable.virginmedia.com] has joined #hplusroadmap15:15
faceface_hi15:15
faceface_what is the healthcare saving that could be brought about by free genetic testing?15:16
faceface_looking for some estimates15:16
faceface_i.e. targeted screening programs could save cash, but I don't know how much15:16
bkeroHow much would an insurance company charge me if I had "bad genes"?15:17
cluckj$0, it's illegal afaik15:18
faceface_http://www.springerlink.com/content/6vkbfrlr7waqk1q6/15:18
bkeroUntil the next cabinet change. :P15:18
faceface_table 1 is nice15:18
cluckjhehe15:18
bkeroWe _just_ got the "pre-existing conditions" clause.15:18
faceface_its illegal right, but they do ask for family history15:18
faceface_which is a proxy for direct testing15:18
cluckjhehe15:19
faceface_bkero: I want to give a talk on these issues15:19
bkerofaceface_: 15:19
faceface_we need govt to step in here15:19
bkeroTo carry that one step further15:19
bkeroWhat would the implications be if some researchers discovered a 'gay gene'?15:19
bkeroGene therapy for soliders?15:20
cluckjlol15:21
fennthis channel is no-philosophy, please15:21
faceface_bkero: right15:21
bkerofenn: Hah alright15:21
faceface_I tried to get some discussion on that here:15:21
cluckjI'm not sure how practical ethical issues are philosophy :P15:21
bkerofenn: this channel is no-fenn, please ;)15:21
faceface_http://www.plosone.org/annotation/listThread.action?inReplyTo=info%3Adoi%2F10.1371%2Fannotation%2Fcdd25aa3-c25e-4348-a894-f504186e9e7f&root=info%3Adoi%2F10.1371%2Fannotation%2Fcdd25aa3-c25e-4348-a894-f504186e9e7f15:22
faceface_fenn: if you can explain to me why 'no-philosophy' whout resourting to philosophical arguments, I'll comply15:22
fenncluckj: this channel also discourages discussion of ethics15:22
cluckjhehehe15:23
faceface_wow- they realy know the value of short url's on that site!15:23
cluckjwhy?15:23
fennfaceface_: because the transhumanist community is mired ass-deep in ethics and philosophy discussions, meanwhile nothing gets done15:23
faceface_fenn: let me know when I start impacting your productivity15:23
fennthe whole point of 'hplusroadmap' is "what do we actually have to do before any of these discussions will matter"15:24
faceface_I said no philosophy btw  ;-)15:24
fennit's all the same to me15:24
cluckjfenn so this is a no-future zone :)15:24
cluckj:trollface:15:24
fennno, you're missing the point15:24
* faceface_ punches cluckj in hte face15:25
cluckj:)15:25
* fenn got trolled15:25
faceface_;-)15:25
cluckjI'm just playin'15:25
cluckjkanzure explained it to me at h+15:25
faceface_anyway, I'm looking for some hard figures to present to policy makers15:25
cluckjbut as an anthropologist, I'm intruigued by it and want to know more about the "why"15:26
faceface_I 100% agree with the philosophy of "do it first, explain it later", but I'm trying to get to this conference and I need a 'credible' talk15:26
cluckjwhich conference?15:27
fennfaceface_: yeah, numbers are nice15:27
faceface_CSHL personal genomics15:27
faceface_one moment15:27
faceface_http://meetings.cshl.edu/meetings/person10.shtml15:28
faceface_once I get an abstract in, I can appply for travel funds15:28
cluckj:\15:28
cluckjI might need to go to that15:28
cluckjYOW15:28
cluckj$82515:29
faceface_heh15:29
faceface_what time is it in the states?15:29
cluckj6:30pm on the east coast15:29
faceface_we have until midnight to get abstracts in and apply for travel funds15:29
cluckjlol15:29
faceface_i mean scolarships15:29
cluckj5.5 hours isn't bad for an abstract15:29
faceface_nah15:29
faceface_I got mine started:15:30
bkeroIf anyone wants to bring me to a conference just let me know. ;)15:30
bkeroI can act intelligent and mysterious -- a real asset to your cause.15:30
faceface_http://humangenomerights.org/index.php/User:Dan_Bolser15:30
fenn"A new form of insurance, genetic insurance, can eliminate these problems and allow everyone to be insured."15:30
faceface_bkero: noted15:30
bkeroalso: I'm poor15:30
faceface_fenn: where did you read that?15:31
fenninteresting idea.. if you don't know your genetics, play the gene lottery!15:31
faceface_heh15:31
fennif you've got bad genes, you win15:31
faceface_thats life15:31
fennhttp://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6V8K-45DMNXW-G&_user=10&_coverDate=03%2F31%2F1994&_rdoc=1&_fmt=high&_orig=search&_sort=d&_docanchor=&view=c&_searchStrId=1374343753&_rerunOrigin=google&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=748c2502eda1c3d4d512348b168d84af15:31
faceface_sounds lunatic15:31
fenni'm just googling for "economics genetic testing"15:31
fennWHO has some bullshit policy document with zero explanation of the rational basis for it15:32
-!- genehacker [~notanemai@cpe-66-68-104-134.austin.res.rr.com] has quit [Ping timeout: 264 seconds]15:32
cluckjfaceface_: http://www.sts.rpi.edu/pl/faculty/michael-fortun check out some of those after you have the abstract submitted15:32
faceface_fenn: sounds right15:32
faceface_'gene watch uk' is a luddite movement with a similar agenda15:33
faceface_cluckj: ty15:33
cluckjyup15:33
cluckjif you have questions, let me know15:34
cluckjhe's my advisor15:34
faceface_ic15:34
fennugh. 'in June 2008, California's Department of Public Health sent letters to 13 genetic testing  companies, informing them that they were "in violation of California law... which prohibits the offering of a clinical laboratory test directly to the consumer without a physician order"'15:34
fenni wish the abortion clinic bombers would go up the food chain a bit15:35
bkeroSolution: fuck California.15:35
faceface_fenn: how do you mean?15:36
fennpeople who make the sort of awful policies that led to the pfizer-state we now live in15:36
faceface_so the bombers should do away with the legislation?15:36
faceface_(in this case)15:36
fennit's not legislation15:36
fennit's "the department of public health" which just does whatever it wants15:37
faceface_I'm just trying to work out if that is what you meant15:37
fenni mean.. anybody who wants to test themselves for possible genetic diseases ought to be able to do it without any fucking doctor getting in their way. if some bureaucrat decides it's in his economic best interest to hurt me (statistically, on average), then fuck them, they should get blown up15:38
faceface_right15:39
faceface_well.. I'm not building bombs... but I know what you mean15:39
faceface_how about tweeking your genes?15:40
faceface_;-) 15:40
faceface_I bet you'll laugh when they make that illegal15:40
fenni very much disagree with this road modern nations like the US are headed down, where we distribute blame so much that policy becomes like "god's will", unexplainable and nothing you can do about it15:40
faceface_fenn: right15:40
cluckjehh, I don't know if it's that simple :P15:40
faceface_there is a system of school inspection here in the UK15:40
faceface_and it turns out that the inspectors are doing a half-assed job15:41
faceface_so what next?15:41
faceface_inspecton inspectors?15:41
fennsomething bad happened. everybody did their job. nobody's fault. nothing gets fixed.15:41
cluckjone of my things is looking at what policy does out in the world, and how it gets made15:41
faceface_just teach because you love to teach damit!15:41
fennwell, now teachers aren't allowed to teach how they want, they must follow standardized teaching practices15:41
fennand students have no choice in the matter either15:42
fennnobody has any choice15:42
faceface_amen15:42
cluckjlol15:42
cluckjcollege professors can teach whatever they want :)15:42
faceface_some dude wouldn't sell me a sandwich because the electricity was down... I had the right money...15:42
faceface_so this is the end of society then is it? your till is bust?15:43
faceface_;-)15:43
fenncollege professor have been meticulously selected by 20 years of filtering processes to be the sort of people that end up perpetuating the stale university system15:43
cluckjhaha15:43
cluckjthanks15:43
* faceface_ goes back to half-assed research ;-)15:43
faceface_l8r15:43
fennso cluckj what do you propose to do about this unfortunate situation?15:44
cluckjbecome a college professor, fuck the system up15:44
-!- Noahj [~noah@c-24-62-35-233.hsd1.ma.comcast.net] has joined #hplusroadmap15:44
fennare you aware this has been tried before?15:45
cluckjyes, there are lots of professors like that now15:45
fenni think to make any difference we have to impact their bottom line, the massive amounts of money flowing into the system15:45
cluckjoh?15:46
fenn50% of grants go to university "administration"15:46
-!- eridu [debian-tor@gateway/tor-sasl/eridu] has quit [Quit: Leaving]15:46
fennthis in addition to the $50k/year or whatever that students pay, either out of pocket or via government grants15:46
fenner, s/grants/scholarships/15:46
fenni can't figure out where all this money is going15:47
cluckjneither can I15:47
fennit's a massive amount of cash, almost as much as the defense budget15:47
fennsth like 200 billion/year15:47
cluckjwell15:47
cluckjI know exactly where it's going15:47
cluckjin the case of my university15:47
cluckj$1 million president's salary, new buildings, sidewalks, etc.15:47
fennoops, sorry, 1 trillion annually, according to usgovernmentspending.com15:48
cluckjI did get a raise this year15:48
fenncluckj: how much do you make now? more than $100k/year?15:50
cluckjLOL15:50
cluckjhahahahhahhahahahahhaha15:50
cluckjdude I'm a PhD student15:50
cluckjI make under $20k a year being a teaching assistant15:51
fennconsider this: "For 2009-10, the average yearly college tuition in the United States was $26273"15:51
cluckjthat doesn't surprise me at all15:51
-!- TigerRage [~Tiger@ip68-11-187-208.br.br.cox.net] has joined #hplusroadmap15:51
cluckjI give my students their money's worth15:51
fennnext time you go outside on a nice day, look at all the undergrats, just look at them15:51
fennsee how many there are15:51
cluckj:)15:52
cluckjthere are 5000 of them15:52
fennso, at least $230m/year for your school, in tuition alone15:52
cluckjplus 3000 graduate students15:53
fennhow much does your lab get in grants? $500k/yr? how many labs in the building?15:53
cluckjall bringing in the same amount15:53
cluckjI don't work in a lab :P15:53
cluckjI don't know how much the labs make15:53
fennwell, whatever unit of administrative accountability15:53
cluckjbut they spend it all15:53
fennno, they fork over 50% of it to the "administration"15:53
fennit's a huge scam, and i'm amazed at how nobody even notices15:54
cluckjI don't think it's that much for my field15:55
cluckjif I had a grant, they would take 0% from me15:55
cluckjit's probably different in the other sciences, though15:55
cluckjlaboratory space and utilities cost a lot of money...so I can see them skimming a bit off the top there15:57
cluckjbut not 50%15:57
-!- Alystair [Alystair@bas1-toronto10-1279558942.dsl.bell.ca] has quit [Ping timeout: 264 seconds]16:01
uniqanomalyhttp://www.youtube.com/watch?v=tzLPCMAA6wQ&NR=1   YEAH16:05
-!- ismarc [~ismarc@75-13-88-188.lightspeed.austtx.sbcglobal.net] has quit [Quit: Leaving]16:06
faceface_genetic insurance... I like it16:15
faceface_I want to introduce 'prison insurance' for the genetically predisposed to violence16:15
faceface_'get out of jail free'16:15
cluckjlol16:16
cluckj"genetic predisposition" to any behavior is a dubious claim16:17
kanzurecluckj: the real reason for no philosophy is that we don't want to handhold you through your philosophical development.. i don't have time for that16:27
kanzurecluckj: it really is 50%; universities apply a blanket policy like this (independent of field)16:31
kanzurefaceface_: you know about http://diygenomics.org/ right?16:32
faceface_http://www.amazon.com/Genetic-Diseases-Monographs-Medical-Genetics/dp/019512582716:35
faceface_kanzure: no16:35
kanzureokay, well, it's exactly what it sounds like :P16:36
* faceface_ looks16:36
faceface_cluckj: seen the genetic predisposition to financial risk taking paper I posted?16:36
kanzurefaceface_: can you link to the conference proceedings website?16:36
faceface_what about the 'genetic predisposition to cystic fibrosis'... not that dubious16:36
kanzureis this it? http://meetings.cshl.edu/abstractsub/abstractsub.aspx16:36
faceface_no, one moment16:37
faceface_http://meetings.cshl.edu/meetings/person10.shtml16:37
faceface_nice site16:37
kanzuredoes it cost $800 to speak at the conference?16:37
faceface_no16:37
faceface_invited speakers have been selected16:38
faceface_conference attendees are being invited to submit talks, but they will pay full wack16:38
faceface_'yough scientists' are encouraged to enquire for scolarships 16:38
kanzurehaha that's retarded16:38
faceface_(expected to be submitting an abstract)16:38
kanzurefor that price, they should sequence your genome16:39
faceface_kanzure: if you're near I'd suggest crashing it16:39
faceface_lol16:39
faceface_100%16:39
faceface_perhaps that is included?16:39
faceface_we should definately organize a sequencing jamboree16:39
faceface_turn up and demand a slot on the programme16:40
faceface_I think we should start versioning the human genome16:41
kanzureanyway, my point is that a presentation on DIYgenomics.org and related topics would be neat.16:41
faceface_get it in git16:41
faceface_true16:41
faceface_will you write an abstract?16:41
kanzureso maybe you should consider an abstract about that16:41
kanzurewait, i thought you were writing an abstract16:41
kanzureand we were helping you?16:41
faceface_I am, but I'm 90% done16:41
kanzurei see16:41
kanzurewell, i can afford to go, but i don't know if i want to16:41
faceface_thanks for teh kaggle link btw16:41
kanzureimho $800+ is really lame16:41
faceface_kanzure: right, if they don't give me a scolarship, I'm not going16:42
kanzureyou should consider going to http://opensciencesummit.com/ instead16:43
faceface_cheaper? ;-)16:44
kanzureyes16:47
faceface_did you know that bees have genetically different populations of mitochondria in their muscles than in the rest of their body?16:50
cluckjcystic fibrosis isn't a behavior16:54
cluckjkanzure would you cite that? D:16:54
kanzurehttp://www.wauland.de/english.html ccc was founded in 1981? huh16:55
cluckjI'm not disagreeing, but I'd like to be able to throw it in the face of administrators >:)16:55
kanzurecluckj: i was looking for the policy on utexas.edu and then for some reason started to read about european endowments for dead men16:56
* kanzure goes back to the hunt16:56
kanzurealso i was scratching my head over http://en.wikipedia.org/wiki/Flibanserin the text for the "mechanism of action" is really vague and probably horseshit ("it has to RESTORE the balance" is the first clue that it's bullshit)16:56
cluckjlol17:01
cluckj"However, some have recently proposed that Female Sexual Dysfunction is merely a case of Disease Mongering and a marketing trick to create a market for sex drugs for women and to medicalize women's sexuality."17:03
cluckjahahaha17:03
cluckjsounds about right17:03
kanzurei don't think this was it:17:04
kanzurehttp://www.utexas.edu/research/osp/osp_handbook.html#idc17:04
kanzurebut it's close17:04
cluckj09/01/08 - 08/31/10  52.0 On Campus  Research 17:06
cluckjholy crap17:06
kanzureoh here we go17:06
kanzurehttp://www.utexas.edu/research/osp/indirect_costs.html17:06
kanzureyeah17:06
cluckjthat's pretty problematic17:06
kanzureit's also standard/typical17:06
kanzurehttp://www.washington.edu/research/main.php?page=indirectCosts17:07
kanzureinteresting how this is standardized across universities under the same name17:07
cluckjI'm looking up RPI's costs stuff17:07
cluckjhehe17:07
kanzure"indirect costs"17:07
cluckjyes17:07
cluckj"protection money"17:08
kanzureand "facilities and administrative cost"17:08
kanzurewashington.edu is 55%17:08
cluckjfacilities and administration costs a lot17:08
kanzurehot damn this is a cash cow17:08
cluckjbut 50%, seriously?17:08
cluckjhttp://admissions.rpi.edu/dept/finop/controller/rfa/rates.html17:10
cluckjsweet.17:10
cluckjthat was for 2004...17:11
cluckjbut I can't imagine it's changed17:11
kanzureoh yay a primer on this bullshit: http://web.mit.edu/fnl/volume/205/canizares.html17:12
kanzurehttp://www.whitehouse.gov/omb/circulars/a021/a021.html17:13
kanzurehttp://www.whitehouse.gov/omb/rewrite/circulars/a021/a021.html17:13
cluckjComputed retroactively for MIT FY2007, the actual F&A rate was 71.1%.17:13
* cluckj barfs17:13
cluckjbbl17:13
faceface_cluckj: autism?17:21
faceface_thats a behaviour isn't it?17:21
faceface_ppls objection to genetic propensities is partly vestigial17:21
faceface_imho17:22
kanzurehttp://google-opensource.blogspot.com/2010/06/introducing-google-command-line-tool.html17:23
-!- uniqanomaly_ [~ua@dynamic-78-8-80-138.ssp.dialog.net.pl] has joined #hplusroadmap17:27
-!- uniqanomaly [~ua@dynamic-78-8-81-3.ssp.dialog.net.pl] has quit [Ping timeout: 260 seconds]17:31
kanzureessays on peer review http://garfield.library.upenn.edu/peerreview.html by Eugene Garfield <eugene.garfield@thomsonreuters.com> (one of the founders of The Scientist in 1986)17:31
faceface_kanzure: out of interest do you use gmail?17:36
kanzureyes17:38
faceface_do you use nested lables?17:38
faceface_the lab17:38
kanzureno, haven't heard of that one17:41
faceface_it's kind of buggy, and everyone has been in the forum discussing bugs, but google are nowhre17:47
faceface_nowhere17:47
faceface_just gripeing is all17:47
-!- mheld [~mheld@c-71-232-51-121.hsd1.ma.comcast.net] has quit [Quit: mheld]18:47
-!- parolang [~user@8e4a01246100775874c4f448e9887093.oregonrd-wifi-1261.amplex.net] has joined #hplusroadmap18:49
-!- TigerRage [~Tiger@ip68-11-187-208.br.br.cox.net] has quit [Ping timeout: 276 seconds]19:11
-!- faceface_ [~dmb@cpc6-dund12-0-0-cust234.sgyl.cable.virginmedia.com] has quit [Ping timeout: 245 seconds]19:14
-!- faceface_ [~dmb@cpc6-dund12-0-0-cust234.sgyl.cable.virginmedia.com] has joined #hplusroadmap19:17
-!- TigerRage [~Tiger@ip68-11-187-208.br.br.cox.net] has joined #hplusroadmap19:17
faceface_cluckj: just read that link... interesting19:17
faceface_can you get me PDF's of some of those articles?19:18
faceface_ever played with a decode me account?19:18
faceface_I'll lurk19:19
faceface_night++19:19
-!- faceface_ [~dmb@cpc6-dund12-0-0-cust234.sgyl.cable.virginmedia.com] has quit [Client Quit]19:19
-!- parolang [~user@8e4a01246100775874c4f448e9887093.oregonrd-wifi-1261.amplex.net] has quit [Ping timeout: 258 seconds]19:51
-!- parolang [~user@8e4a01246100775874c4f448e9887093.oregonrd-wifi-1261.amplex.net] has joined #hplusroadmap20:16
-!- parolang [~user@8e4a01246100775874c4f448e9887093.oregonrd-wifi-1261.amplex.net] has left #hplusroadmap []20:16
-!- TigerRage [~Tiger@ip68-11-187-208.br.br.cox.net] has quit [Ping timeout: 265 seconds]20:37
-!- Alystair [Alystair@bas1-toronto10-1279558942.dsl.bell.ca] has joined #hplusroadmap20:40
kanzurewhat's an ieee "statement of assurance"?21:31
-!- lepton [~john@156.sub-75-231-147.myvzw.com] has quit [Ping timeout: 265 seconds]21:45
-!- lepton [~john@148.sub-75-220-15.myvzw.com] has joined #hplusroadmap21:46
kanzureepic fail with ceo of sparkfun22:01
kanzurehttp://elevenarms.com/lolz.tiff22:01
QuantumGtiff, seriously?22:03
cluckjfaceface yes, let me know what you want22:16
-!- JayDugger [~duggerj@pool-173-74-76-197.dllstx.fios.verizon.net] has joined #hplusroadmap22:19
cluckjfaceface yes autism is a set of behaviors, I guess, but genetic? dunno, maybe22:20
cluckjI'm not saying that there isn't a genetic component to behavioral disorders or diseases, but that setting up some causality is dubious22:20
cluckjand most of the time if you say "genetic predisposition" to a non-expert audience, it ends up setting up some kind of causality in their minds22:21
cluckjwhich is not good22:21
cluckjjust a load of genetic determinism22:21
cluckjI've also played with a decodeme account :P22:21
JayDuggerGood morning, everyone.22:22
cluckjhello22:22
JayDuggerfenn, AJollyLife: AI, nanotech, intelligence enhancement, space colonies--these won't "save the world." Better tools permit a better class of mistake.22:24
JayDuggerWould you rather hit your thumb with a hammer, or put a metal spike through your hand with a nail gun?22:25
JayDuggerOff-world colonies expand our local biology's range of possible habitats.22:25
JayDuggerThat's back-ups, not saving the world.22:26
JayDuggercluckj: have you heard anything about the respone of decodeme, 23andme, and others to the FDA?22:27
-!- memenode [~memenode@unit.memenode.com] has joined #hplusroadmap22:31
cluckjJayDugger, no, not yet, have you?22:34
kanzurehi memenode 22:34
JayDuggercluckj: No, and I worry a little that I wasted good money on the 23andMe test.22:34
memenodehi22:34
JayDuggerGood morning, memnode.22:34
JayDuggermemenode, rather.22:35
memenodeGood morning :)22:35
memenodeeh morning... I didn't even go to sleep yet :D22:35
kanzuresleep is for the meak22:36
kanzure*weak22:36
cluckjJayDugger I don't know how the FDA decision will hit tests that have been submitted already22:36
JayDuggerYes, yes--`sudo skdb make-me -a modafinil`22:36
kanzureonly one?22:38
JayDuggerYou can always take more; you can't very well take less.22:38
kanzureno, i meant on the production22:38
kanzuremaking only one versus in batches22:38
JayDuggerWaste not, want not.22:38
JayDugger(I'll stop talking in aphorisms once I finish coffee cup #2.)22:39
kanzurehttp://www.slideshare.net/AntonyWilliams/mobilizing-chemistry-chemistry-in-our-hands apps for chemistry on smartphones and other crap22:47
kanzurehttp://www.chemaxon.com/library/user-presentations/the-mobile-kinome%C2%A0/22:48
JayDuggerCute logo.22:48
kanzurehttp://www.chemaxon.com/library/ugm-presentations/2010-europe/22:48
JayDuggerAnd a hefty dose of iPad kool-aid.22:50
kanzurefaceface: btw, russell hanson's email address is: russellhanson@gmail.com22:56
-!- TigerRage [~Tiger@ip68-11-187-208.br.br.cox.net] has joined #hplusroadmap23:02
QuantumGget that email kanzure ;)23:17
-!- lepton [~john@148.sub-75-220-15.myvzw.com] has quit [Ping timeout: 265 seconds]23:19
-!- lepton [~john@252.sub-70-201-217.myvzw.com] has joined #hplusroadmap23:20
kanzureQuantumG: you know i'm working with him on like, all his projects, right?23:40
kanzuresorry for the short email. i was on the phone, and then realzed that it would make more sense in here23:41
QuantumGyeah, I figured you would be.. I was more suggesting that you might appreciate the tone23:43
-!- TigerRage [~Tiger@ip68-11-187-208.br.br.cox.net] has quit [Ping timeout: 240 seconds]23:44
kanzureoh23:56
kanzureyou mean the "please do this because i'm lazy" thing?23:57
kanzurehm since when am i a member of humanityplus.org? wtf23:57

Generated by irclog2html.py 2.15.0.dev0 by Marius Gedminas - find it at mg.pov.lt!