2010-12-12.log

--- Log opened Sun Dec 12 00:00:08 2010
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JayDuggerGood morning, everyone.04:12
shady_gm :)04:31
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alystairanyone here in Arizona?05:48
JayDuggerNot this week.05:48
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dbolser14:25 < delinquentme> dbolser, ummm when cells divide they snip a bit of the telomere off the end ... 06:59
dbolserunavoidably, yes, because of the nature of the DNApol06:59
dbolserwhen non circular DNA is replicated, it ends up a bit shorter07:00
dbolserquite funny: http://noosphere.princeton.edu/07:17
dbolseranyone bitten the morphogenesis bug?07:17
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kanzurewhy does everything lead back to Tetrahedron Letters09:13
JayDugger"Six Whys" sucks at work. Must we do it here?09:14
JayDuggerWhat led you to Tetrahedron Letters?09:15
bdeskdbolser: the brain is not an organ which creates thoughts, it is an organ which captures thoughts from the global consciousness by sympathetic vibration09:23
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delinquentmeGOOD MORNING EVERBODAH!09:42
kanzureJayDugger: freitas cites tetrahedron letters occassionally09:44
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kanzureantikythera mechanism09:57
kanzurehttp://www.youtube.com/watch?v=RLPVCJjTNgk09:57
kanzurehttp://www.youtube.com/watch?v=L1CuR29OajI09:57
kanzuremore info http://www.youtube.com/watch?v=_PrlERqn2Qc09:57
alystairseriously, human flight is one thing09:57
alystairgetting wifi/internet during a flight..  we live in a miraculous age09:58
kanzurethe second video is probably better09:58
bdeskalystair: that sounds like the start of a louis ck standup09:58
alystairbdesk: I guess we both don't like taking things forgranted?10:00
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kanzurehttp://diyhpl.us/~bryan/irc/freitas_process.txt10:04
kanzurethis really seems like an awful procedure10:04
bdeskhttp://www.youtube.com/watch?v=8r1CZTLk-Gk&t=2m10:04
kanzurei'm surprised he hasn't figured out some sort of electrically-charged method of atom deposition or something10:05
kanzureso that you don't need to do this sort of "two layer" deposition process (where you grow a crystal on top of the tooltip so that you can mechanically remove the crystal+tooltip leaving the tool bit behind..)10:06
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JayDuggerI'd complain too if I paid good money for in-flight Internet service that failed.10:10
JayDuggerImaging the Antikythera Mechanism (Tom Malzbender, Polynomial Texture Maps, but no Lego)10:10
JayDuggerhttp://www.youtube.com/watch?v=rxNg-tXPPWc10:10
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delinquentmeWOOT! back @ it10:43
delinquentmeQUESTION... so with this action .. what do you guys think about making a list of microfluidic companies im gonna contact .. and say THIS IS WHAT IM DOING ... HERE ARE THE COMPANIES IM TALKING TO .. if you want to help and give me the best terms .. youll be my choice supplier11:11
delinquentmeits mildly coersive ...11:11
delinquentmeBUT11:11
delinquentmeends justify the means11:11
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kanzuredelinquentme: try this list11:12
kanzurehttp://fluidicmems.com/list-of-microfluidics-lab-on-a-chip-and-biomems-companies/11:12
delinquentmeyeah theres also the list from the "whos who in biogerontology companies"11:12
delinquentmeWHICH! btw .. ive worked out access to that database ... theres gotta be good ways to leverage with with what im doing11:13
kanzureif you want reading material try http://bio.cc/Bioinformics/papers/microfluidics/11:16
delinquentmekanzure, have you read through any of these? any of which you could recommend for being easy reads?11:25
kanzurei've read through the vast majority11:28
kanzurewhat do you want to read in particular?11:29
kanzureany of the files with "Review -" in their name might be a nice introduction to whatever they are a review of..11:29
delinquentmeawesome.11:29
delinquentmekanzure, actually let me take a step back here ... im still unsure if microfluidics is the way to go11:29
kanzureanywho, i'm reading freitas' proposed method of diamondoid manufacturing11:30
kanzure1) Synthesize capped tooltip molecule11:30
kanzure2) Attach tooltip molecule to deposition surface w/ correct orientation11:30
kanzure3) Attach handle structure to tooltip molecule11:30
kanzure4) Separate finished tool from deposition surface 11:30
kanzurein step 3 he does CVD to grow crystals around the tooltip molecule so that in step 4 he can mechanically remove the crystal+tooltip by force11:30
delinquentme^ thats nanotech is it not?11:30
kanzurebut why not just grow the crystal on the tooltip molecule in the first place while you are synthesizing it in step 111:30
delinquentmelike holy christ .. nanotech is a whole other ballgame11:30
delinquentmeliterally another completely viable way to go about working out the debilitations of aging11:31
kanzurethen you attach the tooltip+handle to an AFM cantilever beam, then move it to the correct location11:31
kanzuremaybe he's worried that if you use an AFM cantilever to press it against the surface that you won't only be using the dimer at the bottom of the tooltip as the surface intersection11:32
kanzurearen't AFM tips supposed to be single atom diameters in some instances?11:33
delinquentmekanzure, you've lost me11:35
kanzureoh here's an AFM tip with a carbon nanotube (1.8nm diameter tip) http://alice.berkeley.edu/content/pubs/Lengthcontrolandsharpening.pdf11:40
delinquentmekanzure, are you talking to someone that i have ignored or??11:42
bdeskdelinquentme: AFM = atomic force microscope; CVD = carbon vapor deposition11:50
delinquentmeyeah i just checked it out ... i like the MASSIVE case surrounding the microscope11:50
delinquentme#deathlycool11:51
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kanzureQuantum transport through atomic wires http://hub.hku.hk/bitstream/10722/42445/1/38947.pdf12:08
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joshcryerWow, "pantorouter": http://www.youtube.com/watch?v=8wZ1v4PIsYI and demo http://www.youtube.com/watch?v=PDPrFJazD3Q16:02
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kanzurei wish there were more 3 to 5 letter words in mechanical engineering topics16:27
joshcryerme too16:27
kanzurehello joshcryer16:27
joshcryeryou have to go to 80 year old textbooks to find it16:27
kanzurei've looked through those (on google books) and they don't use short words for anything16:28
kanzureexcept maybe: gear, belt, pin, plug, bolt, nut, nail, tack, screw16:29
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bdeskpants16:58
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delinquentmeHERRROOO!!! just saying i <3 all you guys!19:06
jrayhawkd'awwww19:10
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* delinquentme cheezin i know19:41
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QuantumGsaw some Mendels printing yesterday20:01
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kanzureQuantumG: want your money back?20:10
QuantumGdidn't spend any20:11
QuantumGand I guess that's why I think it's pretty neat20:11
QuantumGI showed em the Gada Prize too.. they didn't seem interested.20:14
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kanzurethis one is sexy20:22
kanzureReengineering CCA-adding enzymes to function as (U,G)- or dCdCdA-adding enzymes or poly(C,A) and poly(U,G) polymerases20:22
kanzurehttp://www.pnas.org/content/104/1/54.abstract20:22
kanzure"We were able to transform the CCA-adding enzyme into a (U,G)-adding enzyme that incorporates UTP and GTP instead of CTP and ATP; we transformed the related Aquifex aeolicus CC- and A-adding enzymes into UU- and G-adding enzymes and Escherichia coli poly(A) polymerase into a poly(G) polymerase; and we transformed the B. stearothermophilus CCA-adding enzyme into a poly(C,A) polymerase by mutations in helix J that appear, based on the apoenzyme struct20:23
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kanzureblah does anyone remember that paper where they biotinylated a polymerase to an AFM/SPM probe tip?21:15
QuantumGnah, sorry21:18
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kanzureok what about anything that talks about the current through polymerase enzymes during dNTP incorporation21:48
kanzuredbolser: you wouldn't happen to know a reference would you?21:52
joshcryerspeaking of mechanical engineering, which we weren't, but how might one take a bunch of low torque high rpm inputs and make them be high torque low rpm?21:58
kanzurecog?22:00
kanzureactually i retract my statement and proceed to bed22:00
kanzuregood night22:00
joshcryer'night22:01
joshcryerI'm thinking a cam actually but I'm trying to figure out how to tie them together22:02
jrayhawkhttp://www.youtube.com/watch?v=EAELukfr2oY you use the coolest gear ever invented22:04
joshcryerjrayhawk, that is fucking perfect. Thanks.22:09
joshcryerAlso, brilliant, I wish I actually thought of that. -_-22:11
joshcryerStupid YouTube.22:14
joshcryerAlmost anything to do with magnets = perpetual motion / overunity garbage.22:15
joshcryer:(22:15
QuantumGheh, this Falcon 9 / Dragon module for Orbiter has some issues22:19
QuantumG"press P to separate Dragon from the second stage" ok, presses P twice, two Dragons separate from the second stage :)22:20
jrayhawkthe magnetic gear also being able to act as a low-heat binary clutch and torque limiter is pretty fucking amazing, too22:24
joshcryerQuantumG, yeah, can't even select it.22:35
joshcryerQuantumG, unless you use the editor, etc.22:35
QuantumGit's not an actual Dragon22:42
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joshcryerWould it even qualify as an actual Falcon 9?22:51
QuantumGdunno.. but the Dragon actually says "qualification unit" in the scenario editor22:58
QuantumGand if you select it you get no manoeuvring fuel22:58
joshcryerIt's buggy, I couldn't figure out how to fly it to the moon. :(22:59
QuantumGI flew the second stage there22:59
QuantumGafter refueling in leo23:00
joshcryerHow?23:00
joshcryerHehe23:00
joshcryerManually just flew around? I couldn't even find the moon.23:00
QuantumGyou either have to:  in orbit, align planes with the Moon23:01
QuantumGor: on the ground, launch into 5.28 degrees23:02
QuantumGeither way, you get to orbit in 5.28 degrees inclination.. now refuel.23:02
QuantumGthen select Transfer23:02
QuantumGTGT the Moon23:02
QuantumGturn on HTO23:02
QuantumGhold down DV+ until your DV gets to 3107m/s or so23:03
QuantumGby now you should see an ellipse reaching out to the orbit of the Moon.. now you use EJ+ to move that ellipse around.. you might have to DV+ a little more now and then23:04
QuantumGline up the grey middle line of the ellipse with the yellow dotted line (which will keep moving as you move)23:04
QuantumGonce that's done you just wait (use T to speed up time, R to slow back down) until the moving line is almost on the start line (DTe will get to about 180)23:05
QuantumGnow burn (number pad +)23:05
QuantumGyou'll probably have to burn as much past the start line as you burn before it23:06
QuantumGthe Dv will go down.. you want it to go to 0 but you can just eyeball the ellipse until it matches what you set.23:06
QuantumGnow you're on your way to the Moon... wait 3 days.23:06
QuantumGwhen you get there you want to burn retrograde to circularize your orbit.23:07
joshcryerNice, thanks for the little tutorial.23:10
joshcryer(I'll still get it wrong but I didn't know you could change targets, etc)23:11
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--- Log closed Mon Dec 13 00:00:07 2010

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