2012-09-16.log

--- Log opened Sun Sep 16 00:00:27 2012
-!- Netsplit over, joins: skorket, audy00:11
-!- Netsplit over, joins: ParahSailin00:11
-!- Netsplit over, joins: lichen, yashgaroth, OldCoder_, gedankenstuecke00:12
-!- yashgaroth [~f@cpe-66-27-117-179.san.res.rr.com] has quit [Quit: Leaving]00:36
-!- _0bitcount [~ulises11@213.37.255.2.dyn.user.ono.com] has joined ##hplusroadmap01:37
-!- _0bitcount [~ulises11@213.37.255.2.dyn.user.ono.com] has quit [Quit: Leaving]02:54
-!- _0bitcount [~ulises11@213.37.255.2.dyn.user.ono.com] has joined ##hplusroadmap02:54
-!- _0bitcount [~ulises11@213.37.255.2.dyn.user.ono.com] has quit [Client Quit]02:57
-!- _0bitcount [~ulises11@213.37.255.2.dyn.user.ono.com] has joined ##hplusroadmap03:05
-!- joshcryer [g@unaffiliated/joshcryer] has quit []03:10
-!- _0bitcount [~ulises11@213.37.255.2.dyn.user.ono.com] has quit [Quit: Leaving]03:19
-!- chris_99 [~chris_99@unaffiliated/chris-99/x-3062929] has joined ##hplusroadmap03:27
-!- jmil [~jmil@hive76/member/jmil] has quit [Quit: jmil]03:40
-!- sylph_mako [~mako@203.118.182.228] has quit [Ping timeout: 248 seconds]04:02
-!- marainein [~net@2001:388:608c:6cb5:c09e:31cf:bded:a10d] has joined ##hplusroadmap04:34
-!- kirka [5fa1fc6c@gateway/web/freenode/ip.95.161.252.108] has joined ##hplusroadmap04:40
kirkaHi guys04:46
chris_99hello04:47
kirkaI'm interested in molecular manufacturing, and I'm doing some web searching about companies that do it04:48
kirkaBy quite some time now04:48
kirkaIt's interesting that there are few such companies, and most of them have became inactive some years ago04:49
kirkaFor example Nanorex04:49
kirkaIt just became inactive in 2008, and if you serach a lot you just find that some employees just don't work there anymore04:51
kirkaBut I couldn't find a financial reason of Nanorex diying04:53
chris_99interesting,  their webpage is still up04:53
kirkaYes it is.04:53
kirkaAnd their software NE1 is quite usable (though written in bad programming style), but it doesn't work with modern OSes04:54
kirkaIt's ridiculous that such a program just lies abandoned for 4 years04:55
chris_99is it OSS?04:55
kirkaYex04:55
kirka*yes04:55
kirkahttps://github.com/kanzure/nanoengineer04:55
kirkakanzure could know more about this04:56
kirkaInside is spaghetti code, no wonder that it's so unportable04:57
chris_99heh04:58
kirkaAnd Nanorex isn't the only company that ceased activity: Institute for Molecular Manufacturing is like this too04:58
chris_99hmm, is there examples of the kind of things they made?04:59
kirkaBoth of these organisations research theoretical aspects of MNT04:59
chris_99MNT?05:00
kirkaMolecular NanoTechnology05:00
chris_99oh i assumed they actually manufactured stuff05:00
chris_99based on their designs05:00
kirkaZyvex does that, but it;s in early stage05:01
chris_99maybe that's why they folded, if noone bought their designs?05:01
kirkaby the way Zyvex seems to me the only active firm doing real MNT05:01
kirkaWell, designs by themeselves are just curiosities, but the software is good. Maybe it's the financial crisis that dried them out of funding05:03
kirkaBut they just suddenly stopped05:03
kirkaThe whole situation around nanotechnology is strange today05:04
kirkaAdepts of nanoparticle & nanocoatings receive 100% of gov funding05:05
kirkaWhile real MNT is pushed to the site05:06
kirka*side05:06
kirkaIt's strange because Drexler, who established the field had molecular assebler as final goal05:07
kirkaSo, the term "nanotechnology" has been redefined by synthetic chemists and material sciencists to include their work05:08
-!- nmz787 [~Nathan@pool-108-39-145-80.pitbpa.fios.verizon.net] has joined ##hplusroadmap05:09
chris_99i love the idea of a molecular assembler, that'd be amazing05:10
kirkaAs a result we have now very few people who research molecular nanotechnology.05:11
kirkaYes, I love the idea too05:11
kirkaSo, I don't understand, why there is so little funding given to projects that lead to moecular assebler05:14
kirkaThere seems to be a lot of politics in this question05:15
chris_99are they any proposed ideas for how a molecular assembler would work05:17
chris_99*there05:17
kirkaYes, here is bibliography http://www.molecularassembler.com/Nanofactory/AnnBibDMS.htm05:18
kirkaThis paper for example http://www.molecularassembler.com/Papers/MinToolset.pdf05:19
chris_99cheers :)05:19
kirkaActually, Drexler published a solid book on the subkect 20 years ago: "Nanosystems:    Molecular Machinery,    Manufacturing,and Computation"05:20
kirkaHmm, my timing isn't right - it's early morning in US05:23
kirkaThat's why not so many active users05:24
kirkaI'm from Russia05:24
-!- kirka [5fa1fc6c@gateway/web/freenode/ip.95.161.252.108] has quit [Quit: Page closed]05:30
-!- kirka1 [~Kirka@95-161-252-108.broadband.spb.TiERA.org] has joined ##hplusroadmap05:30
kirka1reconnected05:30
chris_99yeah it's a weekend too05:31
kirka1Well, I'm not in a hurry, heh05:33
-!- EnLilaSko [~Nattzor@unaffiliated/enlilasko] has joined ##hplusroadmap05:40
nmz787kirka1: i am holding a ruusian toy terrier (dog)06:27
kirka1heh06:27
-!- chris_99 [~chris_99@unaffiliated/chris-99/x-3062929] has quit [Ping timeout: 264 seconds]06:40
-!- chris_99 [~chris_99@unaffiliated/chris-99/x-3062929] has joined ##hplusroadmap06:41
kirka1Logs of your channel are interesting06:51
kirka1>< kanzure> just got off the phone with the nanoengineer-1 funder06:51
kirka1>< kanzure> he stopped funding it06:52
kirka1As expected.06:52
-!- jmil [~jmil@hive76/member/jmil] has joined ##hplusroadmap06:55
kirka1btw is kanzure often here?07:10
-!- ElixirVitae [~Shehrazad@unaffiliated/shehrazad] has quit [Remote host closed the connection]07:11
nmz787kirka1: yes07:13
kirka1That's good07:13
kirka1He worked on NE-107:13
nmz787well he saved it from being completely abandoned07:19
nmz787I was trying to get it to run without all the chroot stuff, but haven't been successful at getting it to work07:20
kirka1Good pice of aoftware, but inside it's pretty messy07:20
kirka1*piece07:20
kirka1Such programs shouldn't be written in python.07:21
chris_99nmz787, why's it need chroot?07:21
kirka1Old libraries07:21
chris_99ah07:21
chris_99theres nothing inherently wrong with python07:21
kirka1And it doesn't use multithreading07:21
kirka1Speed, portability, threading, standartisation - python doesn't have it07:22
kirka1I have used it years ago07:22
chris_99hmm, i'm not sure i'd agree with all of those07:22
chris_99it can do multiprocessing07:23
kirka1Yes, you are right07:23
chris_99but the lack of decent threading is annoying07:23
kirka1I agree that it's not bad language07:24
kirka1But if a had to write something like NE1 it would be clojure@jvm, or C.07:24
kirka1Of course simuation modules should be written in C07:25
-!- eudoxia [~eudoxia@r190-135-8-159.dialup.adsl.anteldata.net.uy] has joined ##hplusroadmap07:26
nmz787python is the get-shit-done language though07:27
eudoxiaI'd write the whole thing in some relatively high-performance language07:27
nmz787and there are JIT compilers/interpreters07:27
eudoxiaNE1 goes slow as balls with anything over 10,000 atoms07:27
nmz787eudoxia: C?07:27
eudoxianmz787: or C++, maybe Java07:28
eudoxiaI thought that Python JIT thing had failed?07:28
kirka1Yes07:28
kirka1C++/Java could be used07:28
kirka1Python isn't suited for compilation07:29
kirka1There is PyPy, but it has even more compatibility problems07:29
nmz787Java is not high-performance IMO, at least not compared to python07:30
kirka1Personally, I like lisp for speed and expressivnes, but for a project with team of developers it's too alien technology07:30
kirka1So C++/Java07:30
eudoxiawhich lisp?07:30
kirka1nmz787 JVM is very fast today.07:30
kirka1Scheme and Common Lisp07:30
* eudoxia high-fives kirka107:31
chris_99Java has proper threading nmz78707:31
kirka1heh07:31
nmz787hmm07:31
chris_99unlike python07:31
nmz787ever since I learned java applets like 15 years ago, I never liked it much07:31
nmz787hmm07:31
eudoxiayou are into MNT and use Common Lisp? I thought I had split personality for a while there07:31
nmz787i know a lot of big companies use java07:31
chris_99Java is very different to Java applets07:32
kirka1Why? NOte that Merkle and Drexler have ties with AI and AI was strongly connected to common lisp07:32
kirka1eudoxia I'm also into robotics http://rghost.ru/40311893.view07:32
eudoxiakirka1: what does it do?07:33
chris_99wow nice :) have you built that?07:33
kirka1It;s a second version of my prototype, I'm learning the first one to walk (though servos are quite weak)07:34
kirka1First one is pretty DIYsh: http://rghost.ru/40398113.view07:34
chris_99did you make the plastic with a 3d printer?07:35
kirka1You guys are probably older than me, I'm student in cybernetics faculty of my city's university07:35
kirka1No, it's polycaprolactone, handmade07:35
kirka1Thermo-polymer07:36
kirka1Second prototype will be 3d-printed07:36
nmz787kirka1: http://www.youtube.com/watch?v=gDsKEexQtwI07:36
nmz787my old roommate built that07:36
kirka1Cool07:36
nmz787http://www.youtube.com/watch?v=83LnRTKE1qw07:36
nmz787"Hexapod Robot Movement and Walking Demo"07:37
kirka1Robotics is cool, some 20-30 years ago people thought that in future robots will do hard work for them07:38
kirka1But it didn't happen exactly that way07:39
kirka1Though today service robotics market begins to emerge07:40
kirka1Heartland, Redwood robotics07:40
kirka1It's good that investment moves from internet to ral world again07:41
kirka1*real07:41
eudoxiakirka1: have you heard of http://www.zyvexlabs.com/Research.html07:43
eudoxiahttp://nextbigfuture.com/2010/05/jim-von-ehr-founder-and-owner-of-zyvex.html07:43
eudoxia"We are confident that we will be able to create simple, blocklike objects within the next five years. From that point, capabilities should grow fairly rapidly. Once simple block objects are created, we can programmably assemble them to make more complex objects. Zyvex has already identified a number of market opportunities for these. Once we get the basic capability of creating these simple objects, we can expand thei07:44
eudoxiar complexity and sophistication rapidly."07:44
eudoxia"[...] by 2020 we should have rudimentary molecular manufacturing systems in operation"07:44
kirka1Yes, I researched about their activity07:44
kirka1There was one presentation07:44
eudoxiayeah, you mean the transcript on the Accelerating Future people blog?07:45
kirka1No, it's hard to find07:45
kirka1www.nnin.org/doc/snmr10/zyvex-cornell-2010.pdf07:45
kirka1That's it07:45
kirka1And also seems that this corp works with Zyvex: http://www.icspicorp.com/07:46
kirka1I have high hopes about that07:46
kirka1Finally, integrated parallel MEMS-AFM07:46
eudoxiaoh I remember this one07:47
kirka1Tey still keep their products in secret07:47
kirka1*they07:47
-!- OldCoder [~OldCoder@c-67-188-114-83.hsd1.ca.comcast.net] has quit [Ping timeout: 246 seconds]07:47
-!- OldCoder_ [~OldCoder_@c-67-188-114-83.hsd1.ca.comcast.net] has quit [Ping timeout: 244 seconds]07:47
kirka1NOtice that both Zyvex and icspi are working with DARPA07:47
eudoxiatheir APM page has nothing but a logo07:49
eudoxiaSince DARPA seems to make everything out of sci-fi, I should just ship them a copy of The Diamond Age to see if it will speed up their program :)07:49
kirka1Yes, but they say "2011 icspi reports the first images taken with a CMOS-MEMS scanning probe microscope"07:49
kirka1Heh, you are right07:49
kirka1I love that book, Stephenson does a lot of technical research before writing a book07:50
eudoxiaIt's really refreshing when fiction is factually accurate, and I thought the idea of the feed line was a very creative and plausible addition07:51
eudoxiaIt's a plausible midpoint between completely offloading manufacturing capabilities to the end user: Complex atomic structures are manufactured at Source Victoria, and the assemblers don't have to do any molecular manufacturing, they just grab the prefab pieces and put them together07:51
kirka1Yes, that's a way for big nanotech corps to protect their IP07:51
kirka1And a good way to prevent disasters07:52
eudoxiaSo, big complex SPMs and vacuum chambers are not needed for the personal assemblers, they are only used at the source. The personal nanofactories are just a micropositioning system with a billion end-effectors07:53
eudoxiaDisasters? Like gray goo or people printing MOABs?07:53
kirka1Yes.07:53
eudoxiaIf nanotech is limited to silicon or diamond I doubt people will be able to print bombs07:54
eudoxiaAlthough, you could print a machine to make ammonia and build fertilizer explosives07:54
eudoxiaYou know, probably07:54
kirka1It's complex to label object being manufactured as "dangerous", yes.07:55
kirka1There should be a lot of heuristics.07:55
kirka1It's also interesting that there is only one time the word "spaceship" is mentioned in book.07:55
eudoxiaI think it's pretty useless to try and scan pdb files for potential weapons07:56
kirka1Probably Stepehenson understood that, but it ruined stabe settings07:56
eudoxiaThe entire periodic table is a fucking bomb07:56
kirka1And probably everybody who wanted to fly to space did it, and stable conservative part of society remained on Earth.07:57
kirka1Yes, the question of safety worries me07:57
kirka1Active defence systems should be developed first07:57
kirka1But anyway transient time is most dangerous07:58
eudoxiaActive shields like what Drexler talked about in Engines?07:58
eudoxiathe ones for gray goo?07:58
kirka1Yes, something like that07:58
kirka1Gray goo is an old concept, but I think that precise weapon systems targeted at humans (and even specific persons) are possible07:59
kirka1Viruses are such systems, and they are even atomically precise, heh08:00
eudoxiaI don't think gray goo will ever happen, all the plausible MNT systems I've seen are too big to fit inside, say the volume of a Respirocyte, and simply not fast enough08:00
eudoxiaBut viruses are made of protein, which is made with ribosomes but can't be made with MNT08:01
-!- Mokbortolan_1 [~Nate@c-76-115-136-13.hsd1.or.comcast.net] has joined ##hplusroadmap08:01
-!- Mokbortolan_ [~Nate@c-76-115-136-13.hsd1.or.comcast.net] has quit [Ping timeout: 260 seconds]08:02
kirka1I too don't think that gray goo is possible, but less devastating weapons seem possible.08:02
kirka1Yeah, virus is just an analogy08:02
eudoxiaMaybe a cookie cutter may be possible08:03
eudoxiaI mean, it doesn't take any tooltips, any logic, it's just two counter-rotating rods in a vacuum bag08:03
eudoxiai mean, disks08:03
kirka1I just imagine respirocyte filled with good poison.08:03
kirka1They had control system inside08:03
eudoxiaPure diamond or silicon crystals may be enough08:03
kirka1Maybe.08:04
eudoxiaI wonder what happens when one swallows diamond powder...08:04
eudoxiaThey did?08:04
kirka1Yes, to destroy prisoners08:04
kirka1Actually I've read that fullerenes make mouses live two times longer08:05
eudoxiaOh right the seven-minute timer08:05
kirka1btw, before possibility of nano-weapons there will be some time (it begins now, actually) when bioweapons will become dangeous08:06
kirka1Molecular biology develops at fast pace08:06
kirka1We already design simple proteins08:06
eudoxiadefinitely a faster pace than MNT08:06
kirka1Yes, sadly08:06
eudoxiaI mean, it's basically just Merkle and Freitas who last published anything in 2008, and Moriarty is, well08:06
kirka1BUt self-assembly is also viable route08:07
eudoxiaI suppose08:07
kirka1MOriarty did already published results?08:07
eudoxiaHe wrote a paper about flipping bonds on Silicon surfaces08:07
kirka1I'll search for it, thanks08:08
eudoxialast I checked they had just achieved atomic resolution on C(110) diamond with a qPlus AFM08:08
eudoxiaThe grant runs out in 201308:09
kirka1I don't like tha fact that Drexler, Merkle and Freitas ere marginalized in their own field by bunch of synthetic chemistry and material science guys.08:09
eudoxiaSo unless they had some major breakthroughs, I doubt anything will come out of it. Definitely not a full-implementation of the Minimal Toolset.08:09
eudoxiaOh yeah I was pretty pissed off when I first found out about that.08:09
kirka1The question is, what could I do about that.08:10
kirka1Well, I'm studying physics.08:10
eudoxiaThe quickest path to MNT is probably patterned epitaxy08:11
kirka1Yes, Zyvex does that.08:11
kirka1I hope they'll succeed.08:11
eudoxiaI doubt I can just call DARPA and ask "Yo how is your APM program doing?"08:12
kirka1Heh08:12
kirka1Actually I suspect that military has some APM program.08:13
eudoxiaWell they better08:13
kirka1But it doesn't change situation for us, civilians (yet).08:13
eudoxiaEven if it ends up like in the Diamond Age, at least I'll be able to laugh and angrily shake my fist at people and say "Drexler was right, he was right ALL ALONG"08:14
-!- ThomasEgi [~thomas@gw-ko-kostr.inka-online.net] has joined ##hplusroadmap08:15
-!- ThomasEgi [~thomas@gw-ko-kostr.inka-online.net] has quit [Changing host]08:15
-!- ThomasEgi [~thomas@panda3d/ThomasEgi] has joined ##hplusroadmap08:15
kirka1Seems that he'll become a major historical figure in future history textbooks.08:15
eudoxiaI'll be very disappointed if he doesn't08:15
eudoxiaDARPA's living foundries program might be worth looking into08:19
kirka1But again - I don't like passivity and technical incompetence (no offence meant) of h+ movement - it consists mostly of philosophers and non-sciencists, that wait for Future to solve their problems. Moore's law isn't a "law", it's a consequence of tens of thousands of physicists and engineers working hard to create even more complex ICs.08:19
kirka1So, the main question is "How can I influence future according to my wishes".08:19
eudoxiaIt's okay dude everyone here feels the same08:20
kirka1Yes, thanks, I'll check.08:20
kirka1That's good.08:20
eudoxiawe're always bitching about humanity+ and SIAI08:21
kirka1Heh08:23
kirka1btw J.C.Venter right now is probably debugging his synthetic minimal genome08:23
kirka1afk for ~1 hour (inline skates)08:25
-!- chris_99 [~chris_99@unaffiliated/chris-99/x-3062929] has quit [Quit: Leaving]08:30
-!- chris_99 [~chris_99@unaffiliated/chris-99/x-3062929] has joined ##hplusroadmap08:35
Mokbortolan_1kirka1: so, are you saying "the h+ movement" should endeavor to be more technically competent, or that more technically competent people should join, or what?08:39
eudoxiaI bet it's the first08:47
kanzurekirka1: nanorex closed down because mark sims didn't want to keep funding it09:06
kanzurekirka1: Institute for Molecular Manufacturing is just a thing for freitas and merkle to publish stuff09:06
kanzurekirka1: zyvex doesn't really do anything mnt related.. just some materials stuff, maybe positioning stuff.09:06
kanzurehttp://diyhpl.us/~bryan/papers2/nanotech/ might be helpful09:11
kanzurefreitas is always looking for new papers to publish, but most of his simulations aren't entirely practical yet(?)09:11
kanzure"In particular, presumably as a result of this case, JSTOR now requires strong authentication from the individual MIT account holder, instead of permitting access from MIT's IP address space as they used to"09:20
-!- eudoxia [~eudoxia@r190-135-8-159.dialup.adsl.anteldata.net.uy] has quit [Ping timeout: 255 seconds]09:25
-!- Charlie_ [~quassel@64.31.59.70] has quit [Ping timeout: 272 seconds]09:28
-!- kirka1 [~Kirka@95-161-252-108.broadband.spb.TiERA.org] has quit [Quit: Leaving.]09:30
kanzurewell so much for kirka09:32
-!- kirka [~Kirka@95.161.252.108] has joined ##hplusroadmap09:33
kanzurekirka: welcome back.09:33
Mokbortolan_1I think I'm pretty technically competent... within my sphere.09:33
kanzureMokbortolan_1: that's the first sign that you're not09:33
Mokbortolan_1d'oh!09:33
Mokbortolan_1though, my sphere is in corporate IT09:34
Mokbortolan_1I'm competent at taking things out of the box and turning them on!09:34
Mokbortolan_1and regurgitating things I read on the internet: http://i.imgur.com/P8eig.jpg09:37
kirkakanzure Hi09:38
kanzurekirka: hello.09:39
kirkakanzure I wanted to discuss Nanorex and NE109:39
kanzurei left you some messages http://gnusha.org/logs/2012-09-16.log09:39
kirkaJh, thanks09:40
kirkaWell Mark Sims didn't look like MNT guy09:41
kirkaIt was business for him09:41
kirkaIf IMM is active, it's good09:41
kirkaAnd what about NE1? Would it be useful for anybody?09:42
kanzurenanorex started working with paul rothemund to integrate some dna origami stuff into nanoengineer09:43
kanzurethey were thinking that dna origami would be more practical than molecular nanotechnology stuff09:43
kirkaAnd it didn't work? Seems that only Seeman continues developing DNA origami09:43
kanzuredna origami works fine. paul rothemund and erik winfree's labs still do dna origami. ned seeman is doing crystallography stuff i think.09:44
-!- delinquentme [47ec6527@gateway/web/freenode/ip.71.236.101.39] has joined ##hplusroadmap09:45
kanzuremark just didn't know how to make money off of nanoengineer, and he was afraid there was no practical utility in it09:47
brownieshow does one make money off it?09:48
kirkaMokbortolan_1: I think that h+ movement should have active, not passive attitude toward science/technology. It would be logical for such movement to actually move science/technology forward. From PR point of view it makes movement serious.09:48
nmz787kirka: we are active09:49
kirkaYou are oldschool guys. heh09:49
nmz787huh?09:50
skorket???09:50
nmz787we're all pretty 'young'09:50
kanzurebrownies: off of nanoengineer? well, i still want it to continue existing even without funding.09:50
nmz78720-3009:50
kirkaThen, oldschool by spirit09:50
skorketwhat are you talking about?09:51
kirkaIn media h+ looks like pop-scientific religion09:51
kanzureignore the media09:52
kirkaI do09:52
kirkaBut there are people who don't09:52
kanzureignore those people09:52
kirkaAnd with this image theu discard the whole ide of technoprogressivism09:52
kirka*idea09:52
kanzuretechnowhat?09:52
kirkaYou name it09:52
nmz787normal people are not scientific or progressive09:52
nmz787they follow the media and that's it, and the media is controlled by old white dudes who just want slavery to come back09:53
skorketkirka, instead of talking about it, do it.  If you want something changed, help change it09:53
kirkaYes, you are right, that's my attitude09:54
kirkaBut in the end PR influences funding, without money it's ahrd to do anything09:55
kanzurewe have money available for projects09:55
kanzuremore funding is always nice, but not necessary09:55
kirkaOk [by the way, my english is rather dry becaouse I read mostly technical texts]09:56
kirkaSo, about NE109:56
kirkaI ran it recently, the interface is quite convenient09:56
nmz787kirka: dry is good, as long as you can spell OK09:57
kanzurekirka: linux?09:57
nmz787we're all pretty much scientists or computer nerds09:57
nmz787or engineers09:57
kirkaNo, winXP@VM09:57
kirkaThat's good09:57
kanzurei suggest learning linux :)09:58
kirkaI know it09:58
kirkaActually, I think that monolithic OSes and X86 are things from second millenium09:59
kirkaBut we have this technology and have to use it10:00
kirkaSo, NE1 source is complex10:01
kirkaAnd it's slow10:01
kanzureit runs pretty fast for me10:01
kirkabtw do you still have to use old libraries to run it on Linux?10:02
kirkaWould you write it in another way, if you were to do it?10:02
kanzureyes you must use older libraries for now https://github.com/kanzure/nanoengineer#installing10:02
-!- mensch [~mensch@c-67-189-243-48.hsd1.ma.comcast.net] has joined ##hplusroadmap10:02
brownieskanzure: well, sure. i would like lots of things to continue without funding.10:02
-!- mensch [~mensch@c-67-189-243-48.hsd1.ma.comcast.net] has quit [Read error: Connection reset by peer]10:03
kanzurekirka: once i finish upgrading the old libraries, i will split off different sections into smaller libraries.10:03
kirkaIs it python or architecture fault that it's so unportable?10:03
kanzureit's very portable10:03
nmz787i have it on my laptop10:04
nmz787i take my laptop all over the place!10:04
nmz787:P10:04
kirkaOn WinXP?10:04
kanzureyes it runs on windows xp :(10:04
kirkaDoes Win7 have very diffrent API?10:04
kanzurei have not tried windows 710:04
kirkaAs far as i know sciencists often use windows.10:05
kanzurenope10:05
nmz787nah10:05
kanzurefuck windows10:05
nmz787it depends10:05
brownieshaha10:06
kirkaWell, there was time when I used only linux, but then I began working in some heavy CADs, and had to move to windows.10:06
nmz787i had an english teacher (b.s. in electrical engi, phd in history) that totally surprised me when he was talking about linux10:06
kanzureyes, CAD is a good reason to use windows. true.10:06
kanzureif you do not need solidworks/catia/pro-engineer/autocad, you can use brlcad.org10:06
nmz787i hate that video drivers generally suck in linux10:06
nmz787unless you're super cautious about choosing hardware10:07
kirkaYes, that thing too.10:07
nmz787which in laptops is a bit of a pain10:07
kirkaTwo screens were very complex to set up10:07
nmz787also i have a tablet PC that I love (2nd tablet in last 5 years) and it kinda sucks on linux10:07
kanzurekirka: ask jrayhawk about setting up 20 screens.10:07
ThomasEgikanzure, well for a while now, there's medusa for linux.10:07
kanzurehttp://www.omgwallhack.org/home/jrayhawk/img/hovel/20120512_008.jpg10:07
nmz787multi monitors are a breeze in ubuntu10:07
kirkaHeh10:07
-!- mensch [~mensch@c-67-189-243-48.hsd1.ma.comcast.net] has joined ##hplusroadmap10:07
kirkakanzure If NE1 is just a GUI (simulattion is done by another programs/libraries) Wouldn't it be better to write it about some JVM language?10:08
brownieswhy do you need 20 monitors? o.O10:08
ThomasEgibrownies, because of moar?10:08
kanzurekirka: nanoengineer has lots of other things going on underneath like modeling and heuristics, rules, CAD, etc.10:09
browniesThomasEgi: oh, well, alright then.10:09
kanzurethe GUI is just one small part of nanoengineer10:09
kirkaYes, nanodynamics is written in C10:09
browniesbut he's not even using half of the monitors in his picture!10:09
kanzureiirc python can run on the jvm. i don't think that's a problem.10:09
kanzureno not just nanodynamics, there are other things10:09
kanzurelike the file format python stuff10:10
kanzureand the pdb support10:10
-!- OldCoder [~OldCoder@c-67-188-114-83.hsd1.ca.comcast.net] has joined ##hplusroadmap10:11
-!- OldCoder_ [~OldCoder_@c-67-188-114-83.hsd1.ca.comcast.net] has joined ##hplusroadmap10:11
ThomasEgikanzure, is that jrayhawk guy autistic/asperger or so? he ordered the gpu's by the position of their vga connector...10:12
-!- mensch [~mensch@c-67-189-243-48.hsd1.ma.comcast.net] has quit [Read error: Connection reset by peer]10:12
nmz787ThomasEgi: i don't think so10:12
kanzurejrayhawk is a hero10:12
kirkakanzure Don't python's different versions make it more difficult to maintain? 2.6 2.7 3.1 and so on10:13
kanzurenot really10:13
kanzure2.7 has some minor differences to 2.6, but it's not important for nanoengineer really10:13
kanzurei fixed the incompatibilities for python 2.x10:13
kanzuresupport for python 3.x is not necessary10:13
kanzure(at least, not now)10:13
kirkaOk10:13
-!- devrandom [~devrandom@gateway/tor-sasl/niftyzero1] has quit [Remote host closed the connection]10:14
ThomasEgiyo10:14
kirkaSo the only problem is old libraries?10:14
kanzureyes10:14
kanzurethese are instructions for getting it to work with the old library versions:10:14
kanzurehttps://github.com/kanzure/nanoengineer#installing10:14
kirkaYes, thanks, I have read this repo10:14
nmz787kirka: are you good with python?10:15
nmz787i started trying to port it to newer libs10:15
kirkaI have used it years ago10:15
nmz787so far i can get the GUI to come up, but a few buttons are missing and demo files dont load/show up10:15
kanzurenmz787: you started in the wrong direction10:15
nmz787?10:15
kanzureyou took a non-working version and tried to make it work, which meant everything was broken10:15
kirkaIt would be of great help if someone draw diagram of NE1 architecture10:16
nmz787huh10:16
nmz787it world10:16
nmz787worked10:16
kanzurei suggest taking a working version of nanoengineer, and breaking it one piece at a time10:16
kirkaThere is a hundred of files, it's quite complex10:16
nmz787that's what massive find-replace is for!10:16
kanzureit starts here:10:17
nmz787but the main complaint was actually numeric -> numpy/scipy10:17
kanzurehttps://github.com/kanzure/nanoengineer/blob/master/cad/src/main.py10:17
nmz787and scipy has a converter script10:17
kirkaafk 50 min10:17
nmz787which helped with most of that10:17
kanzureand these things:10:17
kanzurehttps://github.com/kanzure/nanoengineer/tree/master/cad/src10:17
nmz787now it seems i've got qt bugs10:17
nmz787but i havent pushed recently to github10:17
kanzurebtw you should fix your commits :P it said "--NathanMcCorkle" instead of "Nathan McCorkle <nmz787@gmail.com>"10:18
kanzureif you use the second format then github will know to link to your account10:18
kanzureand git/email tools will know how to contact you10:18
-!- mensch [~mensch@c-67-189-243-48.hsd1.ma.comcast.net] has joined ##hplusroadmap10:18
kanzureoh also another thing i've neglected to mention is that there is a lack of unit tests10:19
kanzureif unit tests are written, then it becomes much much easier to tell when things are broken10:19
kanzureso few :( https://github.com/kanzure/nanoengineer/tree/master/cad/src/tests10:19
Mokbortolan_1I just use what's in front of me or what's best for the job10:20
Mokbortolan_1OS wars are stupid10:20
Mokbortolan_1it's like saying "I prefer to use a rounded shovel."10:21
-!- mensch [~mensch@c-67-189-243-48.hsd1.ma.comcast.net] has quit [Read error: Connection reset by peer]10:21
strangewarpFool! Pointed shovels are superior!10:21
kanzureMokbortolan_1: it's not an OS war, it's a simple fact: i will not be able to help you if you continue to use windows10:21
kanzureand since all you windows users have so far been completely unhelpful, i don't see much value in switching to windows10:22
Mokbortolan_1that's fine10:22
kanzures/switching to/using10:22
Mokbortolan_1what is this "switch"10:22
kanzurei corrected myself already, you can't call me on that.10:22
Mokbortolan_1like, dual-booting?10:22
Mokbortolan_1:p10:22
Mokbortolan_1I use Windows when I don't want to fiddle with stuff, and I use Linux when I do10:23
-!- mensch [~mensch@c-67-189-243-48.hsd1.ma.comcast.net] has joined ##hplusroadmap10:24
Mokbortolan_1so really, what you're saying is, "my mental toolkit doesn't contain that tool"10:26
nmz787i have a VM of ubuntu running often10:26
nmz787its OK fast10:26
-!- devrandom [~devrandom@gateway/tor-sasl/niftyzero1] has joined ##hplusroadmap10:27
nmz787but not native fast10:27
nmz787but from what i've read there are too many issues with linux on this laptop10:27
Mokbortolan_1I have a VM of OSX I use to help me write documentation :)10:27
nmz787and i'm not a good enough coder (or not devoted enough with enough concentration/attention span)10:27
nmz787kinda like Mokbortolan_1 said, it works in windows10:27
nmz787and the VM works flawlessly because it doesn't need any of the real drivers10:28
nmz787last summer I used a mac book pro and developed in a ubuntu VM10:28
Mokbortolan_1I like to think that as a user, I've transcended OS choice10:28
nmz787that worked surprisingly well10:28
kanzurewhy a vm? why not just ssh into something?10:29
nmz787you need tubes for that10:30
nmz787and i had no reliable tubes at home that summer10:30
nmz787kanzure: if you were a bear, i think this is what you'd look like http://upload.wikimedia.org/wikipedia/commons/6/63/Lippenbaer-24.jpg10:32
Mokbortolan_1http://i.imgur.com/H0poN.jpg <-- chemistry joke10:35
kanzurenmz787: if that's a link to winnie the pooh, i will be amused10:47
kanzurejrayhawk: there is a surprising lack of content in http://diyhpl.us/~bryan/papers2/nutrition/ and i blame you. will you fix this?10:48
-!- _0bitcount [~ulises11@213.37.255.2.dyn.user.ono.com] has joined ##hplusroadmap10:50
kirkakanzure Does there exist desigm document, or feature list for NE1? It would be helpful to know how the complete CAD should work.10:51
skorketfinally!  got a V-USB example to work10:54
kanzurekirka: no. there are some documents on the wiki, but i don't think they are complete. mostly they are tutorials.10:55
chris_99nice skorket, i've just been trying to get USB to work on the PIC10:58
skorketI imagine it might be easier depending on what you're doing.  (some) PICs are way faster, might even have some USB built in and probably have a lot more supporting software for it10:59
kanzurehm i should recover the nanoengineer wiki before it goes poof. it's been spam-attacked a few times in the past few years.10:59
chris_99skorket, the lib is a bit crap tbh10:59
kirkakanzure Wiki went offline some days ago.11:00
skorketV-USB?11:00
chris_99no, the one for the PIC11:00
kanzurehttp://www.nanoengineer-1.net/mediawiki/index.php11:00
kanzurefuck.11:00
kirkakanzure It would be godd if you made archived version of wiki articles11:00
kirka*good11:00
kanzureok i will call mark in a few hours and ask him wtf11:02
skorketah, interesting.  Not that V-USB is probably much better.  There's the ATMega32u which has some USB built in but I'm not in the position to switch over to that yet.  Plus it's slightly more expensive11:02
kirkaskorket I program MCUs too11:03
kirkaskorket For USB I use PL2303 converter. Cheap and easy.11:03
chris_99what interface does that use kirka11:05
kirkachris_99 It's UART to USB converter11:06
skorket$6 single quantity from mouser.  FTDI chips are about $5 single quantity.  ATMega328 are about $3 single quantity.  FTDI seems to be the standard go-to chip (it's what Arduino uses).  I've been recommended PL2303 before but I don't understand why that's desirable over the FTDI chip or why I shouldn't just use V-USB on an ATMega for low speed applications11:06
-!- ElixirVitae [~Shehrazad@95.5.83.185] has joined ##hplusroadmap11:06
-!- ElixirVitae [~Shehrazad@95.5.83.185] has quit [Changing host]11:06
-!- ElixirVitae [~Shehrazad@unaffiliated/shehrazad] has joined ##hplusroadmap11:06
chris_99hmm, doesn't that mean you can only do serial comms kirka11:06
kirkaYes I do, heh11:06
kirkaI'm more intrested in applying MCUs in robotics11:07
kirkaThere interfaces are irrelevant11:07
kirkaI seriously learned programming with AVR assembly11:08
chris_99yeah it's a nice way to learn asm, with MCUs11:09
skorketinterfaces are the ways you communicate with the widgets you build.  They're important11:09
kanzurekirka: do you know Медведев Данила?11:10
kirkachris_99 Yes, x86 is full of legacy hacks, it's pain to programm it in assembly11:10
kirkakanzure He is leader of russian transhumanists society, I am coutious about him.11:10
kirka*cautious11:10
kanzuredo you talk with him regularly?11:11
kirkakanzure It's about nanoinventor CAD?11:11
kirkaNo, not at all11:11
kirkaI'm on my own11:11
kanzureah okay.11:11
kirkaRusnano is a fraud mostly11:11
kanzureoh? i know very little about rusnano11:11
kanzurei know they have about $10 billion USD11:11
kirkaDon't take them seriously, it'll save your time11:11
kirkaThat's some scheme of some officials to use gov's money according to their interests11:12
-!- nmz787 [~Nathan@pool-108-39-145-80.pitbpa.fios.verizon.net] has quit [Quit: Leaving.]11:12
kanzurei thought maybe rusnano companies would use nanoengineer11:13
kirkaIt's possible, but rusnano is just another fund that invests in nanoparticles, nanocoatings, LEDs, and so on.11:14
kirkaIt is a part of PR company, executed bu government circles to make Russia a better place for investnment in investor's eyes11:15
skorketwoot!  I made an LED turn on!11:16
kirkaI wouldn't invest in Russia if I were an investor, heh.11:16
kirkakanzure: Do you plan to continue sime work on NE1?11:17
kanzureyes11:17
kirkaDo you search for investors?11:18
kanzureno11:18
kirkaThat's good11:18
kanzurebut! if you have piles of money, i will take these piles from you.11:18
kirkaHeh, I'm just young university student11:19
kirkaMatvey Ezhov looks naive with his proposal11:21
kirkaI'm rereading NE-dev mailing list11:21
kirkaNE1 uses Nanodynamics becaouse there are motors and anchors available?11:22
kirka*because11:22
kanzurei think so, yes. i have focused more on the "under the hood code" and less the simulation stuff.11:26
kanzureso cad/src/* not sim/src/*11:26
kirkaI looked in sim/src, it would be a pain to multithread this.11:27
-!- chris_99 [~chris_99@unaffiliated/chris-99/x-3062929] has quit [Quit: Leaving]11:30
-!- asdf__ [443dff8d@gateway/web/freenode/ip.68.61.255.141] has joined ##hplusroadmap11:31
-!- asdf__ [443dff8d@gateway/web/freenode/ip.68.61.255.141] has quit [Client Quit]11:31
-!- chris_99 [~chris_99@unaffiliated/chris-99/x-3062929] has joined ##hplusroadmap11:33
-!- panax [~panax@72.187.64.192] has quit [Ping timeout: 264 seconds]11:34
-!- panax [panax@131.247.116.67] has joined ##hplusroadmap11:34
kirkakanzure btw were does Drexler work now? It's hard to find.11:35
kanzuredunno11:36
kanzurehe just blogs once a year or something11:36
kirkaAlso, he is writing a book11:36
kanzuremeh11:36
kanzurehttp://metamodern.com/11:36
kirkaYes, I'm reading him11:37
kirkaHe couldn't have given up on his vision11:37
kanzurevision is worthless, everyone has that.11:38
kirkaWell, he is Phd11:38
kanzureso?11:38
kirkaHe has the knowledge to realize his vision11:38
kirkaMaybe he doesn't have enough money, yes11:39
kanzureiirc he didn't write any of the nanoengineer software while working at nanorex11:39
kirkaHe isn't a programmer11:39
kanzureprogramming is not difficult11:39
kanzureand is a necessary task to make mnt a reality11:39
kanzuremnt is difficult11:39
kirkaPersonally, I program math intensive software, there math id more important than code (for example - computer vision).11:40
kirkaHe has written Nanosystems, good physical book on subject.11:41
kanzurehttp://gnusha.org/stuff_to_deal_with/nanosystems.tar.gz11:41
-!- eudoxia [~eudoxia@r190-135-76-37.dialup.adsl.anteldata.net.uy] has joined ##hplusroadmap11:41
kirkaOh, cool11:41
kirkaFull version11:41
kirkaThanks11:41
eudoxiaDrexler is at Oxford now I think11:41
eudoxiaI think Drexler only gave up on direct-to-diamondoid, he now prefers proteins and peptides and stuff11:42
eudoxiawhich is rather sad11:42
kirkaWell, biotech rises11:42
eudoxiaOh definitely, it's just that, after 25 years of spearheading the idea of dry UHV MNT11:43
kirkaAnd we'll have to deal with proteins anyway11:43
eudoxiahe sort of gave up11:43
eudoxiabreaks my heart11:43
kirkakanzure Why do you think that Zyvex doesn't do APM? www.nnin.org/doc/snmr10/zyvex-cornell-2010.pdf says that they are making progress with atomic layer epitaxy11:44
kirkaeudoxia It is sad, if it's true11:44
eudoxiaepitaxy might scale better than the min toolset11:45
eudoxiaalthough, germanium can be expensive11:45
kanzurekirka: i am underinformed on zyvex :) their website is pretty bad.11:45
kanzurekirka: are you familiar with diybio? http://diyhpl.us/wiki/diybio/faq11:46
kirkaYes, and they seem to be quiet about their work11:46
eudoxiaIf Germanium can be recovered from the post-etching fluid then it could be made a little cheaper11:46
kirkakanzure I'm intrested in molecular biology11:46
kirkaeudoxia DCB6Ge contains just one Ge atom, whole nanofactory shouldn't include more than ~ten grams of Ge11:47
eudoxiathat's the minimal toolset11:47
eudoxiaepitaxy just uses an SPM on a Hydrogenated Si surface11:47
eudoxiathe whole assembler can be a UHV chamber and a scanning tunneling microscope with a few thousand tips11:48
kirkabtw IBM/Zurich pushes state-of-the-art in AFM11:48
kirka*few billion tips11:48
eudoxiaI bet the first application of Zyvex's work will be the synthesis of atomically-precise AFM tips11:49
eudoxianot that they would last anything, but, you know, it's useful11:49
kirkakanzure If I will have a good idea, I have a whole cytology university nearby, they could get intrested11:50
kirkaeudoxia Yes, and I don't ubderstand why we don't still have ALE patterned tips11:50
kirkakanzure eudoxia: http://www.icspicorp.com/ does next generation AFM.11:51
kirkaMEMS parallel tips11:51
kirkaThey are affilated with Zyvex11:52
eudoxiaI know you told me this morning11:52
eudoxiaor, whatever time it was in Russia11:52
kirkakanzure could be interested11:52
kirkaHeh11:52
kirkaIt's already ~23:0011:52
kirkaTomorrow's Control Theory11:53
kirkaCool subject11:53
kanzuretime has no meaning in this place11:53
eudoxiathe APMC's website is depressingly vacuous11:54
eudoxiahttps://apmc.zyvex.com/11:54
kirkaYes, it's either they are unsuccessful, or they are so successful that they don't talk about it.11:55
eudoxiaexactly11:55
kirkaDARPA is there11:55
-!- delinquentme [47ec6527@gateway/web/freenode/ip.71.236.101.39] has quit [Quit: Page closed]11:58
eudoxiawhich is great12:00
-!- sylph_mako [~mako@203.118.182.228] has joined ##hplusroadmap12:00
eudoxiabut I want results, not reassurances12:00
kirkaI agree12:01
kirkaWell, precise ALE patterning of rectangle is good sign12:01
eudoxiawake me up when they get to 3D :P12:02
kirkaHeh12:03
kirkaFrom the other front, reprogramming ribosome is promising.12:03
kirkaMaking it read 4-codons vs 3-codons12:04
kirkaActually, if we could predict folding of long proteins, we could also design new ones.12:05
kirkaBut neither current supercomputers, nor algorhitms are not sufficient for this task.12:06
kanzurekirka: http://diyhpl.us/laser_etcher/laser_etcher/12:12
kanzurekirka: http://diyhpl.us/~bryan/nucleic/fbi-diybio-dna-v1.pdf12:12
kanzurebrownies: i'm having a brain fart. i wrote a unit test to test something that sometimes make an http request to get something unrelated to the actual unit test.12:13
kanzurebrownies: instead of passing in a boolean to disable that http request on the target function i'm testing, what should i do?12:13
kirkakanzure cool12:16
kirkakanzure But sequence design is musch bigger problem12:18
kirkakanzure: If I knew innovative new gene or gene combination which does useful stuff, I would go straight to some big biotech company12:19
kirkakanzure: Low price is good for iterationg design12:20
kirka*iterating12:20
brownieskanzure: write a getter function for that thing; the function will make the real http request in production, and simply return a cached/locally-stored value in test12:21
kirkakanzure I do DIY, but I understand that it rarely pushes state-fo-the-art12:21
brownieskanzure: although, hm, that's not quite right. you want to still test the asynchronous nature of it.12:21
brownieskanzure: with ruby you'd use something like the VCR gem. with non-ruby you basically need to implement that sort of functionality.12:21
brownieskanzure: i guess it depends how the bigger thing (that you're testing) uses the http request functionality; if it fires a request asynchronously, then there should already be an existing hook for the response anyway.12:22
browniesso, yeah, do that.12:23
kanzurebrownies: it does not require the http request, or rather, i'm not testing that aspect12:24
kanzurekirka: you aren't going to make up a "new sequence" like that. you will either find it in nature or do directed evolution or maaybe some rational protein design, but not much.12:25
kirkakanzure Yes, so I think that the main problem is rational, computational design of proteins12:26
kanzurebrownies: maybe i will just make a mock object for the http request thing. http://www.voidspace.org.uk/python/mock/12:26
kanzurekirka: "main problem" with what?12:27
kirkakanzure Synthetic biology12:27
kanzuresynthetic biology does not focus on protein design12:27
kirkaYes, there are metabolic networks and bunch of other stuff12:28
kirkaDIY DNA synthesizer is cool,of course12:28
-!- eudoxia [~eudoxia@r190-135-76-37.dialup.adsl.anteldata.net.uy] has quit [Read error: Connection reset by peer]12:29
kirkaOh, of course molecular biology12:29
kirkaSynthetic biology deals also with whole cells and organisms12:29
kirkabtw, have you seen Cyber Elegans ?12:29
kirkahttp://code.google.com/p/openworm/12:30
kanzureyes.12:30
kanzurehave you seen the nematode upload project?12:30
kirkaYes12:30
kanzurehttp://diyhpl.us/~bryan/papers2/neuro/nematodeuploadproject/12:30
kirkaThey still cannot determine synaptic weights12:30
kanzuretodd huffman thinks that vesicle placement is more important12:31
kanzurehttp://3scan.com/12:31
kirkaI have digged cyber elegans code, it's quite simple, just point masses, springs and integrate-and fire neurons. And Euler integrator.12:31
kanzurealso you might be interested in http://github.com/kanzure/netmorph12:31
kirkaCool12:32
-!- yashgaroth [~f@cpe-66-27-117-179.san.res.rr.com] has joined ##hplusroadmap12:32
kirka>Simulated Development of Neuron Morphology12:32
kirkaBut personally, I don't like the idea of "mind uploading", it does lead to death of the subject and creation of the copy.12:33
kanzurepeople should just say "neuron scanning"12:34
kanzure"mind uploading" carries too much baggage. i want neuron data regardless of whether or not there is a "mind".12:34
kirkaDo you think that non-invasive mechanism is possible?12:34
kanzurenon-invasive imaging is already possible12:35
kirkaBut not on single neuron, dendrit, or synapse level.12:35
kanzurewell.. if you are allowed to be invasive :)12:36
kanzurehttp://diyhpl.us/~bryan/papers2/neuro/In%20vivo%20imaging%20of%20single%20axons%20in%20the%20mouse%20spinal%20cord.pdf12:36
kirkaHeh12:36
kirkaThere is a group of people that believes that if they will be frozen, then scanned layer by layer and then this data simulated, they won't die.12:37
kirkaThat's ridiculous.12:37
kanzureokay12:38
doclwhy?12:38
doclisn't life a series of copies from moment to moment anyway?12:38
kirkaThat depends on your philisophical position.12:38
kanzuredocl: he has philosophical tie-ups with death apparently12:38
kanzurekirka: we have an almost-strict no philosophy rule in here12:38
kirkaOkay.12:38
doclyou go to sleep, you wake up. who's to say it's not a copy that really wakes up?12:39
chris_99an uploaded mind couldn't be an exact copy anyhow12:39
kanzure"almost strict" means it is allowed if you are careful, or have something new to say, but otherwise i get grumpy :)12:39
* docl shuts up12:39
chris_99regardless of how invasive you are12:39
kanzuredocl: hasn't that argument been argued a thousand ways by now?12:39
kirkaYes.12:39
doclpretty much. the most convincing form involves breaking out quantum mechanics stuff I barely (if that) understand.12:40
kirkaSo, I think cell repair machines is a right way to go.12:40
kanzurekirka: you might enjoy reading these.. http://diyhpl.us/~bryan/papers2/longevity/12:40
kirkaIt does not (almost) involve complex philosophy.12:40
chris_99an uploaded mind is only going to be a rough estimate right?12:41
kirkakanzure That's some big library heh12:41
docllike, qm describes particles as just wave amplitudes, so it doesn't make sense to talk about specific atoms. that's like talking about specific calories or specific degrees of temperature12:41
chris_99was that to me docl12:42
kirkaBut why cell reapir machines aren'y enough for you?12:42
kanzurekirka: cell repair machines don't exist yet12:43
doclchris_99: it was to kirka12:43
chris_99ah12:43
kirkaThey could be easier to build then theory, algorithms and machines for brain scanning12:43
kanzurekirka: 3scan.com already has a scanning microscope..12:43
doclkirka: the concern I have is we maybe can't do one and can only do the other. could be a problem if you put all your eggs in one basket.12:44
chris_99until we get infinite resolution ADCs mind uploading doesn't work imo12:44
chris_99and even then...12:44
kanzurei think regardless of what your philosophical views are, scanning brains is a useful thing to do12:44
kanzureit's better than letting them rot in a grave12:44
doclchris_99: depends on variables we don't really know yet. could be that all that matters from day to day is the rough connectome.12:44
chris_99i dunno, what about chaos theory12:45
kanzure....12:45
kirkaYes, in noninvasive way. And as a person who learned some amount of physics I cannot imagine how this much data could be transferred through electromagnetic field.12:45
chris_99and how much a single change can effect something like a magnet on a pendulum12:46
doclI agree with kanzure on that. even a rough copy is a historical document of sorts. worth keeping in its own right.12:46
chris_99maybe, but i don't think it'll ever be an exact 'copy'12:46
doclchris_99: you aren't an exact copy from one moment to another though. heat, brownian motion, chemical reactions... why should this be different?12:47
kirkaTrying to infer brain structure by EM radiation around it becomes ill inverse problem, it has multiple solutions.12:47
kirkaYes, it's worth keeping, I agree.12:47
doclthere has to be some level at which we are self-repairing and stable otherwise we'd fall apart at the slightest shock. evolution has built us tougher than that.12:47
kanzuredocl: or maybe we are good at avoiding shocks12:48
kanzurefor instance, have you fallen off a cliff today?12:48
chris_99docl, we're a transisition of internal states, which imo you can't just copy12:48
doclkanzure: sure on a relative scale. I couldn't handle falling off a cliff. but I've undergone scads of solar radiation without even noticing it.12:49
chris_99until you can do it on a molecular/quantum level12:49
kirkaWell, I'm glad that I have 50+ years to think about it.12:49
doclchris_99: where do you think the empirical line is drawn? if you had a person with exactly the same connections between all of its neurons and very similar biochemistry, do you expect it to have no similar thoughts or many similar thoughts?12:50
kirkaYes, MNT is something necessary for me to live longer than that. That partly explains my interest in it.12:51
chris_99i think if you could 'copy' using some magic process that replicates the same atoms and quantum states, then yeah, it'd be an exact copy12:51
chris_99however i think it wouldn't be a true copy in the sense of the word, when you turn it 'on' as its senses would cause an immediate divergance12:53
kanzureso?12:53
doclchris_99: I think you're falling into a quantum woo trap... It seems highly unlikely to me that anything subtler than say a covalent or ionic bond is relevant to the person having the same thoughts. there's too much noise for subtler stuff to survive in a human.12:53
kirkaI'm not sure about it. I do not know how brain works.12:54
kanzurebrownies: http://garybernhardt.github.com/python-mock-comparison/12:54
chris_99even if there are no quantum effects, i still think you'd have to copy down to the atomic level12:54
kanzurechris_99: why? the atomic configuration is constantly discarded12:55
doclchris_99: most of the body is highly repeated biochemical components that are damaged and replaced routinely.12:55
kanzurea nick in a certain protein isn't going to be propogated to the next protein that is built, unless it was of genetic or epigenetic origin12:55
chris_99subtle variation in voltages etc. in the brain12:55
chris_99basically i think the synapse weights etc. are highly analogue12:56
kirkaProbably chris_99 says that in highly nonlinear system arbitrary small change of input can produce arbitrary large change in output.12:56
chris_99and the only way to make a true copy is to go to the atomic level12:56
chris_99yeah exactly kirka12:57
kirkaI'm not sure about it.12:57
kanzurechris_99: how do you explain neural networks that operate the same in a petri dish and in a simulation?12:57
chris_99what about that kanzure?12:57
kanzuredo you think it's just magic??12:57
chris_99no12:57
chris_99resolution.12:57
chris_99the brain is highly analogue12:57
kirkaI just think that if cell repair machines will constantly repair molecular machinery of the brain, it will continue to work good.12:57
doclI don't think we're dealing with that kind of system chris_99. people wake up from hypothermia with the same memories. huge change in brain activity there.12:58
-!- mensch [~mensch@c-67-189-243-48.hsd1.ma.comcast.net] has quit [Quit: Lost terminal]12:58
chris_99it appears to give the same output, but is it giving it the same to the nth decimal place kanzure12:58
kanzurechris_99: i think you should read more neurophysiology papers.12:58
kanzureor do more neurophysiology projects.12:58
kanzurepreferably both.12:58
doclsure if you have thought A instead of thought B on a particular day it changes the course of your life. but we don't question the identity of the person because of it.12:58
chris_99i've simulated neurons before12:58
kirkakanzure btw >neural networks that operate the same in a petri dish and in a simulation looks interesting12:58
chris_99and done ANNs12:58
kanzureANNs of course are not what we're talking about - too primitive, etc.12:59
chris_99i'm not saying they are12:59
chris_99i've simulated neurons themselves12:59
kanzureyou were talking about the atomic composition of neurons12:59
kanzureANNs do not model that12:59
chris_99no shit12:59
kirkaHeh, russian h+ guys have exactly same arguments.12:59
kanzureoh sorry i read you saying "i'm not sure they are", not "i'm not saying they are". big difference.12:59
kanzurekirka: this is why i ban philosophy13:00
kirkaHeh.13:00
chris_99see what i'm saying is the output of systems in a petri dish may appear the same13:00
chris_99but they're _far_ too simplistic13:00
kanzurebut if chris_99 has a neurophysiology paper that proves or demonstrates his point, then i will look at it13:00
kirkakanzure >neural networks that operate the same in a petri dish and in a simulation13:01
chris_99i'd like to see a paper that says you can replicate complex organism's brains13:01
kirkaI would read about it.13:01
kirkaDo you know authors?13:02
kanzurekirka: oh i dunno. lots. berge?13:02
kanzureberger13:02
kirkaThat's a very cool result, if true.13:02
kirkaOur neuron models are still not ideal as i know.13:03
kanzureberger did the petri dishes controlling microsoft flight simulator13:03
chris_99oh haha13:03
kanzurekirka: markram's neuron database is pretty accurate for the different types13:03
chris_99so controlling some digital system13:03
kanzurekirka: http://channelpedia.epfl.ch/ionchannels/19013:04
chris_99that's the rat brain thing?13:04
kanzurem_alpha = (0.055*(-27-v))/(exp((-27-v)/3.8) - 1) If v neq -2713:04
kanzure"Neocortical L5PC"13:05
kirkakanzure I have read abou Markram's work, do you know any papers about validation of their models?13:05
kanzurewhich models :)13:05
kirkaAny13:05
kirkaNeuron models of course13:05
kanzuredunno.13:06
kanzurehttp://diyhpl.us/~bryan/papers2/neuro/A%20neuron%20membrane%20mesh%20representation%20for%20visualization%20of%20electrophysiological%20simulations%20-%20Markram%20-%202012.pdf13:06
kanzurehttp://diyhpl.us/~bryan/papers2/neuro/Intense%20world%20syndrome%20-%20an%20alternative%20hypothesis%20for%20autism%20-%20Markram.pdf13:06
kanzurei don't seem to have his other papers on the server at the moment13:06
kirkaI will search by myself, thanks13:06
kanzuresorry to disappoint13:07
kirkaI didn't even expect that I will find it fast, heh13:07
kirkaYour server is cool13:08
kanzurethank you13:08
chris_99kirka, google 'integrate and fire model' for one13:08
kirkaI have read about different (but not most complex) models13:09
chris_99and look at the nathanshepard pdf13:09
chris_99it's a slide show with some interesting stuff13:09
kirkaBut I haven't seen even once about validation13:09
kirkaI think that we will have to make MD run of single neuron to validate these models13:10
kirkaIt's long way into the future13:10
kanzuremolecular dynamics is a lot of simulation effort for something that we know to have thresholds already13:11
kirkaYes, but we still don't know what spike encoding is right13:11
kirkaThere are diffirent hyptheses13:12
kirka*different13:12
kirkaMaybe monte carlo simulation is enough, in principle13:13
chris_99i'm not sure we know exactly how spike encoding works, like you say13:13
chris_99oh someone linked to to an interesting paper13:13
chris_99on trying to decode the visual cortex13:13
kanzurehttp://diyhpl.us/~bryan/papers2/neuro/Reconstruction%20of%20natural%20scenes%20from%20ensemble%20responses%20in%20cat%20visual%20cortex%20-%20Stanley%20-%201999.pdf13:14
-!- nmz787 [~Nathan@pool-108-39-145-80.pitbpa.fios.verizon.net] has joined ##hplusroadmap13:16
chris_99http://openscholarship.wustl.edu/etd/559/13:17
kirkaInteresting, I have read Hubel's book about neural mechanisms of vision, and this is newer research.13:18
-!- lichen [~lichen@c-24-21-206-64.hsd1.or.comcast.net] has quit [Ping timeout: 244 seconds]13:20
kirkaOh, it's 00:22 already, I'll go to sleep13:22
-!- kirka [~Kirka@95.161.252.108] has left ##hplusroadmap []13:23
-!- nmz787 [~Nathan@pool-108-39-145-80.pitbpa.fios.verizon.net] has quit [Quit: Leaving.]13:27
-!- Mokbortolan_ [~Nate@c-76-115-136-13.hsd1.or.comcast.net] has joined ##hplusroadmap13:41
-!- Mokbortolan_1 [~Nate@c-76-115-136-13.hsd1.or.comcast.net] has quit [Ping timeout: 240 seconds]13:42
-!- Charlie [~quassel@64.31.59.70] has joined ##hplusroadmap13:45
-!- Charlie is now known as Guest5584313:45
-!- Guest55843 [~quassel@64.31.59.70] has quit [Remote host closed the connection]13:50
kanzure"As a (bloated, inefficient, high-salary) non-profit, you can read JSTOR's financial filings for yourself:"13:59
kanzurehttp://www.generalist.org.uk/blog/2011/jstor-where-does-your-money-go/13:59
kanzurehttp://lists.wikimedia.org/pipermail/wikien-l/2011-July/109234.html13:59
kanzure"They spend ~$4m a year on all computer costs. (To put that in perspective, they spend $1.3m a year on 'travel' & 'conferences, conventions, and meetings'.)"13:59
kanzure"The average academic journal has 25%-30% profit margin (higher than the rest of the publishing industry), but it can take upto 5-7 years for a new STM journal to build enough of a reputation to break even."14:03
-!- SDr is now known as ShapeShiftr14:12
kanzureare weather predictions tested at the weather stations?14:25
kanzurei mean, why don't my weather predictions come with error bars..14:26
chris_99i wondered about this kind of thing, they must surely test their predicitions mustn't they14:27
kanzurei'm sure their models are battle-tested, but what about instrument errors?14:27
chris_99heh nice - http://www.metoffice.gov.uk/research/areas/seasonal-to-decadal/gpc-outlooks/user-guide/interpret-roc14:28
chris_99and http://www.metoffice.gov.uk/science/specialist/seasonal/probability/glob_seas_prob_skill.html14:29
kanzureideally a weather model with the right instruments would be able to predict things like e.g. individual cloud movement to determine when a sensor will be under direct sunlight14:29
-!- Shehrazad [~Shehrazad@unaffiliated/shehrazad] has joined ##hplusroadmap14:29
-!- ElixirVitae [~Shehrazad@unaffiliated/shehrazad] has quit [Ping timeout: 272 seconds]14:30
chris_99yeah14:31
chris_99i'd like to have a go at creating a really crappy weather predictor from the sat imagery14:35
chris_99just to see what you can do14:35
browniesi've been wanting to try that too14:36
browniesi was looking at the NWS APIs the other day. they're hilariously bad.14:36
browniesbut, they do exist, which i suppose is already pretty impressive for a government agency.14:37
chris_99heh yeah14:37
chris_99the UK gov. provide some quite interesting datasets actually14:37
chris_99and APIs14:37
browniesah, true, you'd need global data, which ... damn, i don't even know where to begin for that.14:49
brownieswould you really have to go to every governments' weather service and look for an API and integrate with it?14:50
kanzurebrownies: i don't know why i thought mocks would do what i needed14:50
brownieskanzure: i told you the answer. at this point, i figure you'll eventually read what i wrote and do it -_-14:50
-!- EnLilaSko [~Nattzor@unaffiliated/enlilasko] has quit [Quit: - nbs-irc 2.39 - www.nbs-irc.net -]14:54
kanzurebrownies: "switch to ruby and async requests"? :)14:55
browniesno, i outlined how to do it regardless of whether the request is sync or async14:57
browniesand the ruby gem was just an example implementation of the approach14:57
kanzure"write a getter function" that's great and all.. but the original problem was i wanted to avoid passing a boolean into the function for "test mode"15:01
browniesif Rails.env.production ... heh.15:05
brownieskanzure: alternately you could write a getter for production and a getter for testing, and your test logic would know to call one instead of the other15:05
brownieskanzure: but, yes, at some fucking level, you are going to have to check to see if you are in testing mode or not -_-15:05
kanzurei'd rather just forcefully inject code from my test method (the one that calls the target code)15:06
-!- Mokbortolan_1 [~Nate@c-76-115-136-13.hsd1.or.comcast.net] has joined ##hplusroadmap15:07
-!- Mokbortolan_ [~Nate@c-76-115-136-13.hsd1.or.comcast.net] has quit [Ping timeout: 268 seconds]15:11
-!- chris_99 [~chris_99@unaffiliated/chris-99/x-3062929] has quit [Quit: Leaving]15:19
-!- chris_99 [~chris_99@unaffiliated/chris-99/x-3062929] has joined ##hplusroadmap15:20
-!- nmz787 [~Nathan@pool-108-39-145-80.pitbpa.fios.verizon.net] has joined ##hplusroadmap15:32
-!- nmz787 [~Nathan@pool-108-39-145-80.pitbpa.fios.verizon.net] has quit [Client Quit]15:32
-!- nmz787 [~Nathan@pool-108-39-145-80.pitbpa.fios.verizon.net] has joined ##hplusroadmap15:33
-!- Jaakko96 [~Jaakko@94-194-89-130.zone8.bethere.co.uk] has joined ##hplusroadmap15:36
-!- Jaakko96 [~Jaakko@94-194-89-130.zone8.bethere.co.uk] has quit [Client Quit]15:36
-!- eudoxia [~eudoxia@r186-54-239-47.dialup.adsl.anteldata.net.uy] has joined ##hplusroadmap15:49
eudoxiaoh goodness uploading discussions15:50
kanzuresorry :(15:50
* eudoxia *bluarrghhh*s all over the floor15:50
kanzureare you going to eat that vomit?15:50
eudoxiaour robot servants can do that for us15:51
eudoxiaI'd just like to answer this: < kirka> So, I think cell repair machines is a right way to go.15:52
eudoxiabut with cell repair machines you are still human. with an uploaded brain, you can analyze and modify everything at any arbitrary level of resolution with ultimate precision, something you can't do currently, or in the near future15:53
eudoxiait is the ultimate form of human enhancement because computers allow for unlimited variations15:54
* eudoxia shuts up15:54
kanzuredo you feel better?15:54
eudoxiayes15:54
-!- eudoxia [~eudoxia@r186-54-239-47.dialup.adsl.anteldata.net.uy] has quit [Quit: Leaving]15:56
kanzurebrownies: vcr is pretty neat actually. https://github.com/myronmarston/vcr#synopsis15:56
kanzurewhere does it store the http response?15:56
kanzurepython version was updated "18 minutes ago".. hrm. https://github.com/kevin1024/vcrpy15:59
brownieskanzure: yup. oh, didn't know they had a python version... that's cool.16:18
brownieskanzure: hilariously, we have your own VCR-like system with FakeWeb. i didn't know VCR existed when we were building out our infrastructure.16:19
brownieskanzure: i suppose that's another option btw, totally decoupled from the particulars of when/where you call the HTTP thing.16:19
brownieskanzure: when you enter testing mode, you can just set up an app-wide block on all external HTTP requests, and then instead spoof a response based on the URL of any outgoing requests your app makes.16:19
kanzurei store some sample html files in tests/samples/, it looks like vcr just uses a custom yaml format for storing that stuff16:27
-!- sylph_mako [~mako@203.118.182.228] has quit [Ping timeout: 240 seconds]16:28
-!- chris_99 [~chris_99@unaffiliated/chris-99/x-3062929] has quit [Quit: Leaving]16:51
-!- chris_99 [~chris_99@unaffiliated/chris-99/x-3062929] has joined ##hplusroadmap16:52
-!- chris_99 [~chris_99@unaffiliated/chris-99/x-3062929] has quit [Client Quit]16:53
-!- chris_99 [~chris_99@unaffiliated/chris-99/x-3062929] has joined ##hplusroadmap16:54
-!- sylph_mako [~mako@203.118.182.228] has joined ##hplusroadmap17:03
kanzureguerrilla open access manifesto http://pastebin.com/cefxMVAy17:15
kanzure"Information is power. But like all power, there are those who want to keep it for themselves. The world’s entire scientific and cultural heritage, published over centuries in books and journals, is increasingly being digitized and locked up by a handful of private corporations. Want to read the papers featuring the most famous results of the sciences? You’ll need to send enormous amounts to publishers like Reed Elsevier."17:15
kanzure"There are those struggling to change this. The Open Access Movement has fought valiantly to ensure that scientists do not sign their copyrights away but instead ensure their work is published on the Internet, under terms that allow anyone to access it. But even under the best scenarios, their work will only apply to things published in the future. Everything up until now will have been lost."17:15
kanzure"That is too high a price to pay. Forcing academics to pay money to read the work of their colleagues? Scanning entire libraries but only allowing the folks at Google to read them? Providing scientific articles to those at elite universities in the First World, but not to children in the Global South? It’s outrageous and unacceptable."17:15
kanzure"“I agree,” many say, “but what can we do? The companies hold the copyrights, they make enormous amounts of money by charging for access, and it’s perfectly legal — there’s nothing we can do to stop them.” But there is something we can, something that’s already being done: we can fight back."17:16
kanzure"Those with access to these resources — students, librarians, scientists — you have been given a privilege. You get to feed at this banquet of knowledge while the rest of the world is locked out. But you need not — indeed, morally, you cannot — keep this privilege for yourselves. You have a duty to share it with the world. And you have: trading passwords with colleagues, filling download requests for friends"17:16
kanzure"Meanwhile, those who have been locked out are not standing idly by. You have been sneaking through holes and climbing over fences, liberating the information locked up by the publishers and sharing them with your friends."17:16
-!- sylph_mako [~mako@203.118.182.228] has quit [Ping timeout: 244 seconds]17:16
kanzure"But all of this action goes on in the dark, hidden underground. It’s called stealing or piracy, as if sharing a wealth of knowledge were the moral equivalent of plundering a ship and murdering its crew. But sharing isn’t immoral — it’s a moral imperative. Only those blinded by greed would refuse to let a friend make a copy."17:16
kanzure"Large corporations, of course, are blinded by greed. The laws under which they operate require it — their shareholders would revolt at anything less. And the politicians they have bought off back them, passing laws giving them the exclusive power to decide who can make copies."17:16
kanzure"There is no justice in following unjust laws. It’s time to come into the light and, in the grand tradition of civil disobedience, declare our opposition to this private theft of public culture."17:16
kanzure"We need to take information, wherever it is stored, make our copies and share them with the world. We need to take stuff that's out of copyright and add it to the archive. We need to buy secret databases and put them on the Web. We need to download scientific journals and upload them to file sharing networks. We need to fight for Guerilla Open Access."17:16
kanzure"With enough of us, around the world, we’ll not just send a strong message opposing the privatization of knowledge — we’ll make it a thing of the past. Will you join us? Aaron Swartz July 2008, Eremo, Italy"17:16
-!- chris_99 [~chris_99@unaffiliated/chris-99/x-3062929] has quit [Quit: Leaving]17:25
skorketI'm in17:42
-!- tashoutang [~tata@pc131090206.ntunhs.edu.tw] has joined ##hplusroadmap18:14
-!- Simurg [~Shehrazad@unaffiliated/shehrazad] has joined ##hplusroadmap18:23
-!- Shehrazad [~Shehrazad@unaffiliated/shehrazad] has quit [Ping timeout: 240 seconds]18:25
-!- ThomasEgi [~thomas@panda3d/ThomasEgi] has quit [Remote host closed the connection]18:42
-!- delinquentme [~asdfasdf@c-71-236-101-39.hsd1.pa.comcast.net] has joined ##hplusroadmap19:16
-!- ShapeShiftr is now known as SDr19:23
-!- joshcryer [~g@unaffiliated/joshcryer] has joined ##hplusroadmap19:51
-!- nmz787 [~Nathan@pool-108-39-145-80.pitbpa.fios.verizon.net] has quit [Quit: Leaving.]20:06
-!- roksprok [~Zac@ip-64-134-233-79.public.wayport.net] has joined ##hplusroadmap20:06
roksprokso guy assembling his ycombinator pitch next to me 'hey bro send me your bio and competitive analysis...remember we need a pic of a hot girl like...partying or something'20:08
brownieso.O20:13
browniestruly he is a marketing genius20:13
roksproki know i'm going to ask him if i can be employee #120:13
roksprokpaid in equity20:14
-!- tashoutang [~tata@pc131090206.ntunhs.edu.tw] has quit []20:17
-!- roksprok [~Zac@ip-64-134-233-79.public.wayport.net] has quit [Ping timeout: 272 seconds]20:21
-!- roksprok [~Zac@ip-64-134-233-79.public.wayport.net] has joined ##hplusroadmap20:21
-!- roksprok [~Zac@ip-64-134-233-79.public.wayport.net] has quit [Client Quit]20:21
-!- roksprok [~Zac@ip-64-134-233-79.public.wayport.net] has joined ##hplusroadmap20:23
-!- lichen [~lichen@c-24-21-206-64.hsd1.or.comcast.net] has joined ##hplusroadmap20:25
Mokbortolan_1let me play you the song of my people20:41
* Mokbortolan_1 stares at you in stony silence.20:41
-!- panax [panax@131.247.116.67] has quit [Ping timeout: 260 seconds]20:42
-!- panax [~panax@72.187.64.192] has joined ##hplusroadmap20:43
-!- tashoutang [~tata@140.131.90.206] has joined ##hplusroadmap20:47
* delinquentme jams out20:48
delinquentmei lik Mokbortolan_120:49
AdrienGhi delinquentme20:54
AdrienGwhats the best way to synth peptides?20:55
delinquentmeAdrienG, Howdahhh20:55
AdrienGpls suggest20:55
delinquentmeAdrienG, chemistry.20:55
delinquentmelol20:55
delinquentmeIDK man :D20:56
delinquentmeyou've got to have a particular peptide you're after no?20:56
yashgarothwhat size of peptide20:57
AdrienGТrр-Аlа-Gly-Gly-Asp-Ala-Ser-Gly-Glu.20:58
yashgarothDelta sleep-inducing peptide20:59
yashgarothyou could go with either chemical synthesis, but I'd recommend e.coli production21:00
AdrienGYes.21:00
AdrienGyashgaroth: how do i mod e.coli21:00
yashgarothgenetic engineering21:00
AdrienGsounds hard21:01
yashgarothmhm21:01
yashgarothto be fair though, it's not as hard as injecting it into your brain21:02
AdrienGyou just have to administer it sub-q.21:05
AdrienGwith an insulin pen.21:05
AdrienGonce a day.21:05
AdrienGpeanuts21:05
yashgarothk I'll leave that stuff to you then21:06
yashgarothman, with how obviously fake all these "peptide suppliers" are on the bodybuilding forums, there's a remarkable amount of placebo effect21:09
AdrienGwhat makes yuo think they are fake21:11
-!- chevbird [~chevbird@209-6-62-26.c3-0.sbo-ubr1.sbo.ma.cable.rcn.com] has joined ##hplusroadmap21:11
yashgarothhttp://www.cemproducts.com/peptides/dsip-5mg.html has 5 milligrams for $37 which is far below the cost of a legit product21:11
chevbirdif they have QC metrics on the site i wouldnt worry about it21:13
chevbirdbut i doubt they do21:13
yashgaroththey never do21:13
chevbirdkids today...21:14
yashgaroth"all our products are totally legit" is about as QC as they get21:14
chevbirdtotally21:14
yashgarothit probably works in the sense that they put in some cheap chinese sleep drug or something, because bodybuilders don't have mass spectrometers21:15
chevbirdjust mass21:15
yashgaroth...heh21:16
yashgarothI'm stealing that one21:16
AdrienGwhen we will finally have chemical printers:<21:29
AdrienGjust print whatever small molecule at home21:29
yashgaroththe drexler model 1 should be out in about 50 years21:29
AdrienG:<21:30
-!- chevbird [~chevbird@209-6-62-26.c3-0.sbo-ubr1.sbo.ma.cable.rcn.com] has quit [Quit: Leaving]21:36
-!- _0bitcount [~ulises11@213.37.255.2.dyn.user.ono.com] has quit [Remote host closed the connection]21:37
AdrienGyashgaroth: melanotan is clearly legit on many sites21:40
AdrienGits effects are very noticable.21:40
AdrienGand its a far more complex molecule.21:40
yashgarothehhhh21:43
yashgarothhey I'm not stopping you from throwing your money at some site21:45
yashgarothoh hey peptide synthesis is cheaper than I thought21:48
-!- nmz787 [~Nathan@pool-108-39-145-80.pitbpa.fios.verizon.net] has joined ##hplusroadmap21:50
yashgarothok back to your original question, it would be far easier to pay a service to make it for you unless you need grams of it21:50
-!- skorket [~skorket@cpe-24-58-232-122.twcny.res.rr.com] has quit [Ping timeout: 240 seconds]21:56
nmz787grams of what?22:05
nmz787I will check logs22:05
-!- Proteus [~Proteus@unaffiliated/proteus] has joined ##hplusroadmap22:06
yashgarothhe wants a short peptide, I was surprised to learn how cheap they actually are22:06
nmz787kanzure: "You’ll need to send enormous amounts to publishers like Reed Elsevier."22:06
nmz787amounts of what though?22:06
nmz787how much?22:06
nmz787wait22:06
yashgarothoh, delta sleep-inducing peptide I think22:06
yashgarothlogs consist of an hour of me being dumb if you wanna read 'em22:06
nmz787err22:06
nmz787not now22:06
nmz787well you didnt ramble too long22:09
nmz787yashgaroth: ^22:09
yashgarothheh22:09
-!- skorket [~skorket@cpe-24-58-232-122.twcny.res.rr.com] has joined ##hplusroadmap22:09
yashgarothI'd no idea peptide synth was like 1000x cheaper than dna synth22:10
nmz787how much for a gram of protein?22:12
nmz787link??22:12
nmz787oh 5mg22:12
nmz7873722:12
nmz787$22:12
nmz787hmm22:12
yashgarothadmittedly it's only good up to maybe 30 aa's, but that's most peptide hormones22:13
nmz787oh wait22:13
nmz787http://www.cemproducts.com/peptides/dsip-5mg.html22:13
nmz787isnt it22:13
yashgarothhttp://www.genscript.com/peptide.html22:14
nmz787oh22:14
nmz787you cant do proteins?22:14
nmz787what does a place like you work for charge?22:15
nmz787where can i order a protein, rather than a gene?22:15
yashgarothit gets exponentially harder the longer the protein is22:15
nmz787it says up to 20022:15
yashgarothnot for that low low price though22:16
nmz787yeah it doesnt list pricing for the higher ones22:17
yashgarothwe're at maybe $ten thousand a gram for GMP grade with e.coli synthesis, though it varies and that's at multi-gram production batches22:17
nmz787 hmm22:18
kanzurei hate cable modems22:19
kanzurei hate tethering apps. if the app is dead, i shouldn't have other devices on my network connected to the interwebs.22:19
yashgarothlike we're growing one that's 70-80 aa's long because it becomes cheaper than synth at that length22:19
nmz787ahh22:22
yashgarothat least for the required quality levels, since it's extremely hard to separate a peptide from one that's 1-2 aa's shorter and the FDA ain't having no mixed formulation22:22
-!- nmz787 [~Nathan@pool-108-39-145-80.pitbpa.fios.verizon.net] has quit [Quit: Leaving.]22:23
roksprokhow do you grow a peptide? add aa's one at a time and wash in between?22:23
yashgarothpretty much22:23
kanzurelong-term link for that pastebin link i dropped earlier.. http://p2pfoundation.net/Guerilla_Open_Access_Manifesto22:24
-!- yashgaroth [~f@cpe-66-27-117-179.san.res.rr.com] has quit [Quit: Leaving]22:33
kanzure"Greg Maxwell just released 33GB of JSTOR scientific papers via The Pirate Bay because of the indictment against Aaron."22:35
kanzurehttps://thepiratebay.se/torrent/6554331/Papers_from_Philosophical_Transactions_of_the_Royal_Society__fro22:35
kanzure31 seeders22:36
-!- delinquentme [~asdfasdf@c-71-236-101-39.hsd1.pa.comcast.net] has quit [Quit: Leaving]22:36
-!- Mokbortolan_ [~Nate@c-76-115-136-13.hsd1.or.comcast.net] has joined ##hplusroadmap22:38
-!- Mokbortolan_1 [~Nate@c-76-115-136-13.hsd1.or.comcast.net] has quit [Ping timeout: 268 seconds]22:39
-!- OldCoder is now known as TiredCoder22:44
-!- jmil [~jmil@hive76/member/jmil] has quit [Quit: jmil]22:45
-!- Charlie [~quassel@64.31.59.70] has joined ##hplusroadmap22:46
-!- Charlie is now known as Guest505322:46
-!- Guest5053 [~quassel@64.31.59.70] has quit [Ping timeout: 272 seconds]22:50
skorketadc conversion done, USB communication done, now onto the next phase22:53
-!- Charlie_ [~quassel@64.31.59.70] has joined ##hplusroadmap22:59
Mokbortolan_???23:00
Mokbortolan_and then, profit23:00
-!- Mokbortolan_ [~Nate@c-76-115-136-13.hsd1.or.comcast.net] has quit [Read error: Connection reset by peer]23:07
-!- Mokbortolan_ [~Nate@c-76-115-136-13.hsd1.or.comcast.net] has joined ##hplusroadmap23:08
-!- Mokbortolan_ [~Nate@c-76-115-136-13.hsd1.or.comcast.net] has quit [Ping timeout: 240 seconds]23:12
-!- nmz787 [~Nathan@pool-108-39-145-80.pitbpa.fios.verizon.net] has joined ##hplusroadmap23:19
--- Log closed Mon Sep 17 00:00:28 2012

Generated by irclog2html.py 2.15.0.dev0 by Marius Gedminas - find it at mg.pov.lt!