| --- Log opened Thu Sep 18 00:00:10 2014 | ||
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| delinquentme | kanzure, yew le awake? | 01:45 |
|---|---|---|
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| archels | kanzure: excellent tune | 02:23 |
| archels | (moar) | 02:23 |
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| archels | .head www.scholarpedia.org | 04:08 |
| yoleaux | 302, text/html; charset=iso-8859-1 | 04:08 |
| archels | .title www.scholarpedia.org | 04:08 |
| yoleaux | archels: Sorry, that command (.title) crashed. | 04:08 |
| archels | yeah | 04:08 |
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| archels | aaand we're back | 04:16 |
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| pi- | paperbot: http://www.ncbi.nlm.nih.gov/pubmed/14668808 | 05:10 |
| paperbot | http://libgen.org/scimag/get.php?doi=10.1038%2Fnrd1228 | 05:10 |
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| pi- | paperbot: http://www.ncbi.nlm.nih.gov/pubmed/16173073 | 05:52 |
| paperbot | http://libgen.org/scimag/get.php?doi=10.1002%2Fana.20627 | 05:52 |
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| kanzure | vietnam banned bitcoin, right? | 06:44 |
| kanzure | archels: https://www.youtube.com/watch?v=YeV0-H0LA4w | 06:52 |
| kanzure | .title | 06:53 |
| yoleaux | Robert R. Hardy - Aesthetics (Loquai Remix) | 06:53 |
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| archels | ♪ | 07:04 |
| kanzure | archels: https://www.youtube.com/watch?v=Ap2gLkDPAiA&index=9&list=PLgO7JBj821uEPwFiOKzetby0W1lBHMhCD&t=25s | 07:09 |
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| kanzure | "Experimenting coupling a CPU-based rigid body simulation with a GPU-based fluid simulation." https://github.com/haxiomic/GPU-Fluid-Experiments | 07:15 |
| kanzure | this is poorly implemented but otherwise an interesting bookmarking tool https://github.com/davidlazar/jotmuch | 07:16 |
| eudoxia | oh cool, that's exactly the same thing i use (YAML bookmarks) | 07:17 |
| eudoxia | but i have a script to turn them into an HTML homepage + JS open/closing of sublists | 07:18 |
| kanzure | needs arrow + click installed | 07:20 |
| kanzure | TypeError: __new__() got an unexpected keyword argument 'keep_trailing_newline' | 07:20 |
| kanzure | i almost like the idea of opening up $EDITOR to change details about the new bookmark | 07:20 |
| kanzure | maybe if there was a way to open at a specific character number so that you don't have to always navigate after the editor opens up | 07:22 |
| kanzure | otherwise you're always going to be typing 5w by default when the editor opens up to get to the tag section | 07:23 |
| kanzure | vim +5go | 07:23 |
| kanzure | er, it's variable of course because of the url param appearing first. hrm. | 07:32 |
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| * heath has been wanting a synthetic biology podcast for awhile | 08:12 | |
| heath | not a one off "what is synbio" podcast as you see all over the place | 08:12 |
| heath | https://soundcloud.com/longnow/synthetic-biology-debate | 08:16 |
| heath | drew endy jim thomas debate on synbio | 08:16 |
| heath | also on fora | 08:16 |
| heath | http://fora.tv/2008/11/17/Drew_Endy_and_Jim_Thomas_Debate_Synthetic_Biology/Designing_and_Building_Organisms_Simple_As_Writing_Code | 08:16 |
| kanzure | "... there is no source, the bytecode has multiple reentrent abstractions, is unstable and has a very low signal to noise ratio, the runtime is unbootstrappable, the execution is nondeterministic, it tries to randomly integrate and execute code from other computers... multiple reentrant and self-modifying abstractions. absolutely everything has subtle side effects." | 08:20 |
| kanzure | but other than that, sure, it's exactly like coding.. | 08:20 |
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| heath | kanzure: is that the cathal interview? | 08:50 |
| heath | sounds like it | 08:51 |
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| kanzure | nope just hplusroadmap | 08:52 |
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| ybit | .meow | 09:07 |
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| * ybit approves of taking the kittens out of the lab | 09:08 | |
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| pi- | kanzure: http://en.wikipedia.org/wiki/Legality_of_Bitcoin_by_country <-- looks like Wikipedia hasn't caught up with the news | 10:08 |
| kanzure | .title https://news.ycombinator.com/item?id=8336025 | 10:12 |
| yoleaux | TXT Record XSS | Hacker News | 10:12 |
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| nmz787_i | you don't even need to click on these titles to enjoy some of them https://www.reddit.com/r/Showerthoughts/ | 12:20 |
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| jrayhawk | i would prefer to replace half the web with nntp | 12:49 |
| jrayhawk | for instance, every blog | 12:49 |
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| * nmz787_i be the change you wish to see in the internet | 13:01 | |
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| * nmz787_i just bought https://eevblog.myshopify.com/products/ucurrent | 13:06 | |
| nmz787_i | they were out of stock for a while | 13:06 |
| nmz787_i | http://www.eevblog.com/projects/ucurrent/ | 13:06 |
| chris_99 | oh yeah i remember those | 13:08 |
| chris_99 | is anyone a vim expert per chance? i'm trying to return a value from lua to a vim function | 13:10 |
| dingo | not that much of an expert :) | 13:14 |
| dingo | vim developer, hehe | 13:14 |
| dingo | there are mailing lists for plugin devs i beleive | 13:14 |
| jrayhawk | chris_99: i think the traditional answer from vim experts is something like "if you don't want to choose between a crappy interface (emacs) and a crappy scripting language (vim), use http://www.emacswiki.org/emacs/Evil " | 13:14 |
| chris_99 | haha | 13:14 |
| chris_99 | woo! got it, in the lua side you do: vim.command("return 'blah'") | 13:15 |
| chris_99 | dingo, what do you think of neovim | 13:17 |
| jrayhawk | what does it offer over dispatch.vim ? | 13:22 |
| dingo | ill probably use neovim if they solve the concurrency issue | 13:23 |
| dingo | neither vim or emacs has yet | 13:23 |
| dingo | if emacs solves it i'd use the whatever | 13:23 |
| dingo | evil mode | 13:23 |
| dingo | problem is its emacs-lisp | 13:24 |
| jrayhawk | What's the concurrency issue? | 13:24 |
| dingo | running things like static analysis, or llvm stuff, without blocking | 13:24 |
| dingo | the one i use now writes to an external file that vim periodically polls | 13:24 |
| dingo | and sometimes gets wrong and fucks all up | 13:24 |
| jrayhawk | I've seen that done with emacs, but I don't know the details. | 13:24 |
| dingo | just watched a presentation on a 30yr emacs veteran who says emacs hasn't solved it either | 13:25 |
| jrayhawk | Most notably for compile-testing in the background and syntax highlighting compiler errors | 13:25 |
| jrayhawk | which was pretty slick | 13:25 |
| dingo | https://www.youtube.com/watch?v=VADudzQGvU8 | 13:25 |
| kanzure | were either of emacs or vi well designed from the beginning? | 13:26 |
| jrayhawk | No, both went through major rewrites. | 13:26 |
| jrayhawk | From scratch rewrites, even | 13:26 |
| dingo | i'll use anything somebody impresses me with | 13:26 |
| dingo | makes me go "i wish i could do that in vim" | 13:26 |
| dingo | i just dont see it, its usually the other way around | 13:27 |
| kanzure | i could see the value of a vim or emacs keybinding compatible thing that maybe doesn't have to deal with the burden of legacy cruft | 13:28 |
| dingo | http://youtu.be/VADudzQGvU8?t=34m39s <- timeindexed at what im speaking about, jrayhawk | 13:28 |
| kanzure | hah pmetzger used to be in here | 13:29 |
| jrayhawk | something's throttling me down to 200kiB/s on that video, so I don't think I'm going to be seeing minute 34 anytime soon. | 13:29 |
| kanzure | "Perry Metzger has been using Emacs as his text editor since early September, 1983 -- nearly 31 years." | 13:30 |
| kanzure | what a squatter | 13:30 |
| dingo | (the audience in this particular talk pisses me off... they're so loud an obnoxious, interrupt him all the time... its in new york so i attribute it to that" | 13:30 |
| dingo | H) | 13:30 |
| dingo | ddd | 13:30 |
| kanzure | haha he had to tell someone that a subprocess is different than running it in elisp | 13:32 |
| kanzure | quite the soldier | 13:32 |
| dingo | yeah.. i feel a vim users group wouldn't be so damn obnoxious lol | 13:32 |
| kanzure | i told him to fuck off once | 13:33 |
| kanzure | he still holds it agains tme heh | 13:34 |
| kanzure | *against me | 13:34 |
| dingo | hehe | 13:36 |
| kanzure | also i think he's top 50 suspects for satoshi nakamoto | 13:36 |
| dingo | i'd place him #45 | 13:38 |
| kanzure | win 5 | 13:46 |
| kanzure | oops | 13:46 |
| nmz787_i | http://www.bbc.com/earth/story/20140916-mystery-fairy-circles-defy-explanation | 13:48 |
| kanzure | dingo: oh it was an emacs user group. the heckling makes slightly more sense now. | 13:52 |
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| jrayhawk | correction: i am crazy, it was not async | 14:13 |
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| kanzure | ybit says http://www.biotechniques.com/news/Cellular-Barcoding-Goes-Somewhere-Over-the-Brainbow/biotechniques-353864.html | 14:14 |
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| nmz787_i | paperbot: http://dox.doi.org/10.1093/nar/gku604 | 15:03 |
| nmz787_i | .title | 15:03 |
| yoleaux | nmz787_i: Sorry, that command (.title) crashed. | 15:03 |
| paperbot | ConnectionError: HTTPConnectionPool(host='dox.doi.org', port=80): Max retries exceeded with url: /10.1093/nar/gku604 (Caused by <class 'socket.gaierror'>: [Errno -2] Name or service not known) (file "/usr/local/lib/python2.7/dist-packages/requests/adapters.py", line 375, in send) | 15:03 |
| nmz787_i | paperbot: http://dx.doi.org/10.1093/nar/gku604 | 15:04 |
| paperbot | http://diyhpl.us/~bryan/papers2/paperbot/e4e00064138b7435297290b7e87b10bb.txt | 15:04 |
| nmz787_i | http://www.plosbiology.org/article/info%3Adoi%2F10.1371%2Fjournal.pbio.1001411 | 15:12 |
| nmz787_i | "Second, barcodes from synaptically connected neurons must be associated. One way to associate a pre- and postsynaptic barcode is by means of a transsynaptic virus such as rabies [19] or pseudorabies (PRV) [20]. These viruses have evolved exquisite mechanisms for moving genetic material across synapses and have been used extensively for tracing neural circuits in rodents. To share barcodes across synapses, the virus must be engineered | 15:12 |
| nmz787_i | to carry the barcode within its own genetic sequence. After transsynaptic spread of the virus each postsynaptic neuron can be thought of as a “bag of barcodes,” consisting of copies of its own “host” barcodes, along with “invader” barcodes from presynaptically coupled neurons" | 15:13 |
| nmz787_i | to carry the barcode within its own genetic sequence. After transsynaptic spread of the virus each postsynaptic neuron can be thought of as a “bag of barcodes,” consisting of copies of its own “host” barcodes, along with “invader” barcodes from presynaptically coupled neurons" | 15:14 |
| nmz787_i | hmm, those last few quoted words appear garbled in the logs | 15:14 |
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| kanzure | neo4j has 29k commits why? https://github.com/neo4j/neo4j | 15:31 |
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| nmz787_i | ok let's try this again | 15:33 |
| nmz787_i | "Second, barcodes from synaptically connected neurons must be associated. One way to associate a pre- and postsynaptic barcode is by means of a transsynaptic virus such as rabies [19] or pseudorabies (PRV) [20]. These viruses have evolved exquisite mechanisms for moving genetic material across synapses and have been used extensively for tracing neural circuits in rodents. To share barcodes across synapses, the virus must be | 15:33 |
| nmz787_i | engineered to carry the barcode within its own genetic sequence. After transsynaptic spread of the virus each postsynaptic neuron can be thought of as a "bag of barcodes,"" consisting of copies of its own "host" barcodes, along with "invader" barcodes from presynaptically coupled neurons (Figure 2B)." | 15:33 |
| nmz787_i | kanzure: no idea re commits... I looked at neo4j briefly last weekend but not since... since it didn't seem to have anything related to graph crossings, which was why I took interest in it | 15:35 |
| nmz787_i | idk if it would be required of me to use a database rather than just classes that point to each other, since I think I was going to do crossing detection using line segment intersection geometry | 15:36 |
| kanzure | networkx probably has a thing for that | 15:42 |
| kanzure | matt would know too | 15:42 |
| chris_99 | kanzure, heh someone else pointed that out to me today too heh, about neo4j and the commit count | 15:45 |
| kanzure | you might know one of my other aliases | 15:46 |
| chris_99 | haha | 15:46 |
| nmz787_i | idk, lot's of people screwing up commits and reverting? https://github.com/neo4j/neo4j/graphs/code-frequency | 16:06 |
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| Windy101 | paperbot: http://onlinelibrary.wiley.com/doi/10.1111/1567-1364.12206/pdf | 16:29 |
| paperbot | http://diyhpl.us/~bryan/papers2/paperbot/f327266474e193db0183eeb119b0372c.txt | 16:29 |
| Windy101 | paperbot: http://onlinelibrary.wiley.com/doi/10.1111/1567-1364.12206/abstract | 16:30 |
| paperbot | http://diyhpl.us/~bryan/papers2/paperbot/3e3feb19fd241f346b750fdf8220b0.txt | 16:31 |
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| kanzure | haha that was someone from amyris | 16:34 |
| kanzure | this is an amusing novelty from a mining pool, a bootable linux usb stick live distro thingy that points immediately to their mining pool https://magicpool.org/magicos.php | 16:35 |
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| kanzure | wow such frequency https://campbx.com/api.php "Please ensure that there is at least 500 millisecond latency between two calls" | 17:25 |
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| kanzure | dbolser: i have been playing with this https://github.com/davidlazar/jotmuch (for bookmarks) | 17:37 |
| kanzure | dbolser: perhaps that will fix the boredness? | 17:37 |
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| dbolser | kanzure: I'm only bored because I should be doing something else | 17:40 |
| * dbolser tries to focus | 17:40 | |
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| Lemminkainen | paperbot http://www.nature.com/nnano/journal/v9/n9/full/nnano.2014.156.html | 20:42 |
| paperbot | http://libgen.org/scimag/get.php?doi=10.1038%2Fnnano.2014.156 | 20:42 |
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| kanzure | too many links | 21:53 |
| kanzure | even for me | 21:53 |
| kanzure | although it is nice to have a sane bookmarking system again | 21:54 |
| kanzure | now i don't have to remember urls as much | 21:54 |
| kanzure | kanzure@abacus:~/local/jotmuch/jotmuch$ ./jot count | 21:55 |
| kanzure | 464 | 21:55 |
| catern | wow | 22:18 |
| catern | everyone is playing with jotmuch | 22:19 |
| catern | kanzure: unless you saw people mentioning it in lesswrong? | 22:19 |
| kanzure | no | 22:24 |
| kanzure | it was in a github email | 22:24 |
| kanzure | not surprising that others know about it | 22:25 |
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| --- Log closed Fri Sep 19 00:00:10 2014 | ||
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