| --- Log opened Fri Jul 01 00:00:45 2016 | ||
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| Ivan_ | @kanzure, An update on the ultrasound project from my side, we have got the basic components for the initial proposed design, but upon further investigation of the Murgen project system, I found that they had an additional component whihc we currently do not have. That is an IC for the receiver front end that has a Low Noise Amp and a Variable Gain Control. | 00:48 |
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| Ivan_ | The LNA is critical in RF systems, as it sets the tone for the overall system Signal to Noise Ratio and the VGA is needed as the power that is received from the signals that penetrate deeper into the tissue are lower (due to more travel distance) so the VGA essentially brings the returns to a similar level. | 00:52 |
| Ivan_ | Now, we are also thinking if we can do this in software, by having a ADC that has a high dynamic range and at the same time I am also looking at the Integrated solutions that the major manufacturers are providing. TI/Maxim Integrated/Analog Devices all have dedicated components for the front end, so want to see if we can simplify the final design by going for a well priced integrated solution. | 00:55 |
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| kanzure | Ivan_: thanks for the update | 03:30 |
| maaku | speaking of ultrasound imaging : http://www.ribbonfarm.com/2016/06/29/the-daredevil-camera/ | 03:36 |
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| seanph_ | @maaku that's really cool | 06:29 |
| seanph_ | @maaku synaesthesia! | 06:31 |
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| maaku | kanzure (and seanph_) you'd be interested in this HN response: https://news.ycombinator.com/item?id=12006633 | 08:57 |
| maaku | it seems there are such microphone arrays for recording all conversations at a conference hall (or surveilance) | 08:57 |
| chris_99 | i haven't looked too much at the daredevil one, but is it MEMS | 08:58 |
| chris_99 | mics | 08:58 |
| chris_99 | he's using | 08:58 |
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| seanph_ | yeah, I didn't think it was something groundbreaking, just a cool project | 09:10 |
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| maaku | chris_99: yes | 09:14 |
| chris_99 | ah cool, ive got some ultrasound mems mics i need to solder, PDM & analog ones | 09:15 |
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| kanzure | hm. | 10:00 |
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| kanzure | erqoifisadjfoiqjfeoiqwfsadfjaoiq | 13:55 |
| chris_99 | quite | 13:59 |
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| chris_99 | does anyone know what a crt rejuvenator actually does, out of interest | 15:06 |
| kanzure | jrayhawk has spent a bunch of time contemplating the nature and existence of CRTs so i'm sure he has some sort of answer | 15:06 |
| chris_99 | heh cool | 15:07 |
| jrayhawk | I'm actually very poorly versed in the realm of CRT technicianry. | 15:09 |
| kanzure | well, then we can bug seanph when he's around. | 15:09 |
| jrayhawk | With modernish CRTs, convergence and porch alignment are mostly automated, but I could see a lot more calibration being useful for old stuff. | 15:10 |
| chris_99 | i just found https://www.youtube.com/watch?v=_kgy7CCsEBQ they seem to indicate they put more power through the gun than normal to get rid of debris seemingly | 15:11 |
| chris_99 | http://www.avsforum.com/forum/16-crt-projectors/598829-crt-rejuvenator.html mentions something similar | 15:16 |
| chris_99 | "Often the cathode is contaminated. But normal beam currents will not break this contamination loose. The sencore uses an elevated current "Shot" to blast some material off the cathode to expose still viable material. " | 15:16 |
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| bbrittain | waz up | 15:44 |
| bbrittain | long time no see folks | 15:44 |
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| bbrittain | anyone looked into pi-calculus stuff? | 15:48 |
| kanzure | hi bbrittain | 15:51 |
| bbrittain | kanzure: what's up?! | 15:51 |
| kanzure | bbrittain: was hanging out at w3c boston thing yesterday, i'm back in austin at the moment, headed to SF | 15:53 |
| bbrittain | I'm in NYC now! | 15:53 |
| kanzure | whatfor? | 15:55 |
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| bbrittain | kanzure: pure cs software engineering job. | 15:58 |
| xentrac | bbrittain: sounds like a contradiction in terms | 15:58 |
| xentrac | I've read about the π-calculus but I haven't actually tried to write anything in it | 15:59 |
| bbrittain | well, I'm working on a new distributed cache system right now. that's fairly CSy | 15:59 |
| xentrac | not even concurrent naïve fibonacci, which is the first obvious dumb thing to do in it | 15:59 |
| bbrittain | xentrac: I'm mostly curious about it due to the potential for modeling cellular networks | 15:59 |
| bbrittain | I'm finding surprisingly little on this | 16:00 |
| bbrittain | xentrac: http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.0030174#s2 | 16:02 |
| xentrac | as in biology? | 16:02 |
| bbrittain | yea yea | 16:02 |
| xentrac | I agree, distributed cache is fairly CSy | 16:02 |
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| xentrac | π-calculus is still pretty deterministic, isn't it? | 16:04 |
| bbrittain | nope. you can get different results | 16:04 |
| xentrac | I mean you can model nondeterminism but not, like, stochastic randomness | 16:04 |
| xentrac | it doesn't have probability distributions in it | 16:04 |
| bbrittain | that's my understanding as well | 16:06 |
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| kanzure | bbrittain: what have you been reading lately | 16:08 |
| kanzure | here are some things | 16:09 |
| kanzure | "Continuous genetic recording with self-targeting CRISPR-Cas in human cells" http://biorxiv.org/content/early/2016/05/20/053058 | 16:09 |
| kanzure | "Molecular recordings by directed CRISPR spacer acquisition" http://diyhpl.us/~bryan/papers2/bio/Molecular%20recordings%20by%20directed%20CRISPR%20spacer%20acquisition%20-%20Church%20-%202016.pdf | 16:09 |
| kanzure | http://diyhpl.us/~bryan/papers2/neuro/Physical%20principles%20for%20scalable%20neural%20recording%20-%20Marblestone.pdf | 16:09 |
| kanzure | "Rosetta brains: A strategy for molecularly-annotated connectomics" http://arxiv.org/abs/1404.5103 | 16:09 |
| kanzure | "Whole-brain imaging with single-cell resolution using chemical cocktails and computational analysis" http://diyhpl.us/~bryan/papers2/neuro/Whole-brain%20imaging%20with%20single-cell%20resolution%20using%20chemical%20cocktails%20and%20computational%20analysis%20-%20Susaki%20-%202014.pdf | 16:09 |
| kanzure | "Reconstruction of complete connectivity matrix for connectomics by sampling neural connectivity with fluorescent synaptic markers" http://www.yumishch.me/mishchenko_epub.pdf | 16:10 |
| bbrittain | single-cell resolution? | 16:10 |
| bbrittain | huh | 16:10 |
| kanzure | someone around these parts claims to have sub-synaptic resolution of things... | 16:10 |
| bbrittain | I've been meaning to get back into bio stuff lately | 16:12 |
| kanzure | did you run away screaming from how terrible it is? | 16:12 |
| bbrittain | yes :( | 16:12 |
| kanzure | it's pretty amazingly bad, isn't it | 16:12 |
| bbrittain | worst. industry. ever. | 16:12 |
| bbrittain | rigor? yolo. | 16:13 |
| * kanzure points to yoleaux bot | 16:13 | |
| bbrittain | I'm convinced that it can be awesome though | 16:14 |
| bbrittain | but I may just be delusional | 16:14 |
| kanzure | tomorrow i am in sf to hang out with human genome project reboot person for a ~week | 16:14 |
| kanzure | this phase of the project is re: synthesis of genomes | 16:14 |
| kanzure | rather than sequencing | 16:15 |
| bbrittain | sounds expensive | 16:15 |
| kanzure | technically an open flame money pit might be cheaper | 16:16 |
| kanzure | (unkar plutt did it. i thought it was a mistake.) | 16:17 |
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| nmz787_i | damnit, why don't I have 2-10X the amount of energy so I could actually have something to provide for this hgp-write | 16:19 |
| kanzure | because i am hogging all the energy and computational capacity | 16:20 |
| kanzure | it's an old temple monk trick | 16:20 |
| kanzure | known as a fork bomb | 16:20 |
| bbrittain | kanzure: I'm sure you have an opinion: genspace? | 16:21 |
| kanzure | they hate the internet too much | 16:21 |
| bbrittain | elaborate? | 16:21 |
| kanzure | ellen hates the internet people | 16:22 |
| bbrittain | oh, I'd believe that | 16:22 |
| bbrittain | she's a ... person. | 16:22 |
| bbrittain | s/person/character/ | 16:22 |
| bbrittain | xentrac: check out stochaistic pi-calculus | 16:23 |
| bbrittain | huh. I bet you could implement a cool toy stochastic pi-calculus emulator in erlang/elixir | 16:25 |
| kanzure | nmz787_i: there's probably a bunch of stuff that can be stolen from the logs as ideas for hgp-write | 16:25 |
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| bbrittain | xentrac: http://lucacardelli.name/Papers/Efficient%20Simulation%20of%20Biological%20Processes%20in%20Stochastic%20Pi%20Calculus%20%28CMSB%29.pdf | 16:26 |
| bbrittain | :/ of course these microsoft researchs wrote SPiM in ocaml | 16:30 |
| kanzure | nmz787_i: literally grepping the logs for "dna" and "synthesis" might be enough to show some interesting ideas that we have probably forgotten about | 16:40 |
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| bbrittain | ugh. I'm exhausted. any good movie recs? | 16:50 |
| nmz787_i | i need regex help | 16:59 |
| nmz787_i | https://regex101.com/r/gU7oC1/1 | 16:59 |
| nmz787_i | I don't want the last period in the capture | 16:59 |
| bbrittain | capture till the period? | 17:00 |
| bbrittain | or, you just don't want it | 17:00 |
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| nmz787_i | I don't want it... but I need to support chained stuff like a.b.c.thatwaslastone() | 17:00 |
| nmz787_i | I got it with a negative lookahead https://regex101.com/r/gU7oC1/2 | 17:05 |
| nmz787_i | /me goes to find-replace-all-in-path | 17:06 |
| bbrittain | 0_o lookahead? doesn't sound like a regex to me | 17:06 |
| bbrittain | that can't be O(n) | 17:06 |
| bbrittain | #perl | 17:07 |
| bbrittain | why not just | 17:08 |
| bbrittain | ([a-zA-Z._]*).keys | 17:08 |
| kanzure | bbrittain: kung fury is a good movie | 17:08 |
| kanzure | bbrittain: https://www.youtube.com/watch?v=bS5P_LAqiVg | 17:08 |
| bbrittain | kanzure: seen it :P | 17:08 |
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| bbrittain | nmz787_i: ([\w._]*).keys\(\) | 17:09 |
| bbrittain | much cleaner | 17:09 |
| bbrittain | actually a regex | 17:09 |
| kanzure | then watch rick and morty reruns | 17:09 |
| bbrittain | not a perl monstrosity | 17:10 |
| kanzure | rick and morty is very close to a perl monstrosity | 17:10 |
| bbrittain | rick would be like, a J progammer or something. | 17:11 |
| bbrittain | quicksort=: (($:@(<#[), (=#[), $:@(>#[)) ({~ ?@#)) ^: (1<#) | 17:11 |
| kanzure | horrible. | 17:12 |
| bbrittain | I know a guy who swears by APL-based languages | 17:12 |
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| kanzure | http://www.nature.com/news/arxiv-preprint-server-plans-multimillion-dollar-overhaul-1.20181 | 17:17 |
| bbrittain | sorry. why would it cost that much?! | 17:18 |
| bbrittain | Last year, the site served up around 139 million | 17:18 |
| bbrittain | I mean, that's a lot, but not crazy numbers | 17:18 |
| kanzure | for the reddit integration (HN commentator suggests using reddit for this. launch the nukes!) | 17:18 |
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| bbrittain | I always assumed arXiv was being run out of some university basement | 17:20 |
| bbrittain | not a program with >$1m budget | 17:20 |
| chris_99 | heh | 17:21 |
| kanzure | i think it used to be super underfunded,but then they started to complain to other schools and libraries and guilt them into funding it or something | 17:21 |
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| nmz787_i | bbrittain: nice... strangely it says average steps taken is lower for mine (130 vs 296 for yours) | 17:40 |
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