--- Log opened Mon Jul 01 00:00:12 2013
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01:40 <@fenn> is anyone here mohamad tarifi? (or know him)
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03:33 <@fenn> wow katy and todd got married
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04:04 <@fenn> .title finally all that faux nanotech is starting to pay off http://www.youtube.com/watch?v=DZrjXSsfxMQ
04:04 < yoleaux> fenn: Sorry, that command (.title) crashed.
04:04 <@fenn> bah
04:04 <@fenn> NeverWet the magic spray-on waterproofer
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05:45 < EnLilaSko> paperbot: http://link.springer.com/article/10.1007%2Fs10620-011-1653-7
05:45 < paperbot> error: HTTP 500 http://diyhpl.us/~bryan/papers2/paperbot/Therapy%20with%20the%20Opioid%20Antagonist%20Naltrexone%20Promotes%20Mucosal%20Healing%20in%20Active%20Crohns%20Disease%3A%20A%20Randomized%20Placebo-Controlled%20Trial.pdf
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07:34 < EnLilaSko> paperbot: http://www.sciencedirect.com/science/article/pii/S1590865812002137
07:34 < paperbot> no translator available, raw dump: http://diyhpl.us/~bryan/papers2/paperbot/Complementary%20and%20alternative%20medicine%20in%20inflammatory%20bowel%20disease%20patients%3A%20Frequency%20and%20risk%20factors.txt
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09:37 < Qfwfq> paperbot: http://www.jstor.org/stable/27957839
09:37 < paperbot> no translator available, raw dump: http://diyhpl.us/~bryan/papers2/paperbot/MUSIC%20AND%20MATHEMATICS.txt
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09:39 < Qfwfq> paperbot: http://www.jstor.org/discover/10.2307/27957839?uid=3738176&uid=2&uid=4&sid=21102500196677
09:39 < paperbot> no translator available, raw dump: http://diyhpl.us/~bryan/papers2/paperbot/MUSIC%20AND%20MATHEMATICS.txt
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10:23 <@kanzure> woot, merged https://github.com/psyrendust/dedrm-ebook-tools/pull/2
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12:27 < chris_99> paperbot: http://onlinelibrary.wiley.com/doi/10.1002/bscb.19710800538/pdf
12:27 < paperbot> no translator available, raw dump: http://diyhpl.us/~bryan/papers2/paperbot/4f8ebfa1429339ab106f10a9a559ad75.txt
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13:29 < chris_99> paperbot: http://pubs.acs.org/doi/pdf/10.1021/jf8004965
13:29 < paperbot> no translator available, raw dump: http://diyhpl.us/~bryan/papers2/paperbot/1caece4454fe9e92bb8c76ea2280488e.pdf
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15:10 < eudoxia> paperbot: http://dl.acm.org/ft_gateway.cfm?id=166133&ftid=66347&dwn=1&CFID=344441685&CFTOKEN=36298442
15:10 < paperbot> no translator available, raw dump: http://diyhpl.us/~bryan/papers2/paperbot/415590bdbe6e0de7597c822dd8cd7b89.pdf
15:11 < eudoxia> thanks paperbot
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15:59 < EnLilaSko> paperbot: http://www.tandfonline.com/doi/full/10.1080/10408398.2010.540360#tabModule
15:59 < paperbot> no translator available, raw dump: http://diyhpl.us/~bryan/papers2/paperbot/a7dddcea53e23525cd9dbc091e148b25.txt
16:02 < EnLilaSko> paperbot: http://www.sciencedirect.com/science/article/pii/S0166223613000088
16:02 < paperbot> no translator available, raw dump: http://diyhpl.us/~bryan/papers2/paperbot/Gutbrain%20axis%3A%20how%20the%20microbiome%20influences%20anxiety%20and%20depression.pdf
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16:47 < nmz787_> paperbot: http://het.sagepub.com/content/10/2/103.full.pdf+html
16:47 < paperbot> no translator available, raw dump: http://diyhpl.us/~bryan/papers2/paperbot/Intentional%20Self-Poisoning%20with%20Glyphosate-Containing%20Herbicides.pdf
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16:48 < nmz787_> kanzure: that article seems to have not been run through pdf paranoia
16:48 < nmz787_> kanzure: is papernot not setup to use it automatically?
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17:07 <@kanzure> nmz787_: it uses pdfparanoia
17:07 <@kanzure> nmz787_: not all watermarks are supported yet
17:07 <@kanzure> nmz787_: file a bug report, https://github.com/kanzure/pdfparanoia/issues
17:10 < streety> I was involved with a study looking at organophosphate use in self-poisoning a few years ago. Surprisingly the solvents the pesticide was dissolved in was crucial for the toxicity
17:12 <@kanzure> by study do you mean attempted suicide? i don't understand.
17:13 < gradstudentbot> I had to remind my professor who I was today.
17:13 < streety> It was a porcine model being used to investigate self-poisoning
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17:19 < nmz787_> streety: yeah that paper mentions the 15% surfactant being an issue on it's own
17:19 < nmz787_> and some of the in-vitro assays mentioned glyphosate having lower toxicity than roundup
17:21 < streety> In this case I think the surfactant was present at a much lower %, it was the cyclohexanone which was the main issue. This is the article -> https://www.ncbi.nlm.nih.gov/pubmed/22365945
17:22 < biostudent> paperbot: http://www.sciencedirect.com/science/article/pii/S0092867413002225
17:22 < paperbot> no translator available, raw dump: http://diyhpl.us/~bryan/papers2/paperbot/The%20.pdf
17:22 < biostudent> i am a fan of paperbot.
17:45 <@kanzure> nmz787_: thanks for the bug report
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18:28 < nmz787_> http://www.youtube.com/watch?annotation_id=annotation_931166&feature=iv&src_vid=nmC0ygr08tE&v=W9yWv5dqSKk
18:28 < nmz787_> .title
18:28 < yoleaux> Yves Couder . Explains Wave/Particle Duality via Silicon Droplets [Through the Wormhole] - YouTube
18:28 < nmz787_> awesome
18:29 < nmz787_> http://users.df.uba.ar/dasso/fis4_2do_cuat_2010/walker.pdf
18:29 < nmz787_> http://www.youtube.com/watch?v=nmC0ygr08tE
18:29 < nmz787_> .title
18:29 < yoleaux> The pilot-wave dynamics of walking droplets - YouTube
18:29 < nmz787_> same people, more detail, less morgan freeman
18:29 < gradstudentbot> I remember the paper, I just don't remember the details.
18:31 < nmz787_> gradstudentbot: just watch the videos, they're good and quick
18:31 < gradstudentbot> The smell of e.coli is so very rewarding.
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18:45 < streety> Does anyone know of an equivalent service to pubmed for other fields? I'm trying to get title, abstract, authors etc for a doi
18:46 <@kanzure> if doi.com is failing you then google is your only hope
18:46 < streety> crossref.org seems to do a good job for title and authors but it doesn't get the abstract
18:46 < streety> I'll take a look at doi.com
18:46 <@kanzure> doi is a commercial registry
18:46 <@kanzure> that's where doi numbers come from
18:47 < streety> I don't think that's right, did you mean dx.doi.org ?
18:47 <@kanzure> dunno
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18:48 < streety> that's the service that links doi's to the source
18:48 < streety> I don't fancy parsing html from a sundry of different sources
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18:48 <@kanzure> if the source doesn't exist anymore then you can use http://web.archive.org/web/*/http://nature.com/whatever
18:49 < streety> the sources presumably still exist, I would just prefer json over html
18:49 < streety> I'd even take xml
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18:51 <@kanzure> zotero translation-server can return json if there is a zotero translator written
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18:51 < streety> ah I hadn't considered that, I'll take a look
18:53 < streety> that definitely has promise, thanks
18:54 < streety> kanzure, were you asking me about pdfminer a while back? Did you manage to do what you wanted with it?
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19:06 <@kanzure> no
19:06 <@kanzure> i still have to read the pdf spec and write a manipulation library
19:06 <@kanzure> because apparently nobody else has
19:08 < streety> sorry to hear that, my experience was that it was generally nasty
19:09 < gradstudentbot> That's the control group, right?
19:12  * brownies pokes gradstudentbot 
19:12 < gradstudentbot> I'm writing that up and it will be submitted soon.
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21:09 <@kanzure> .title http://www.onlineprnews.com/news/388368-1370772843-announcing-plan-for-first-head-transplant-in-man.html
21:09 < yoleaux> announcing plan for first head transplant in man
21:09 <@kanzure> perahps i should just give him money since none of you will take it
21:09 <@kanzure> *perhaps
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21:10 < Adifex> well shit
21:10 < Adifex> what can't they transplant now
21:11 < gradstudentbot> Guys, where are my samples?
21:13 < Adifex> I'm trying to convince a friend of mine to become an organ donor. He's pretty conservative in every sense of the word, and he once told me,
21:13 < Adifex> "When they put me in the ground, I want them to put all of me in the ground."
21:13 < Adifex> Donating vital organs? cool. Donating my whole body save for my head..?
21:13 < Adifex> That's a little creepy.
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21:26 < Adifex> kanzure, do you know how aging differs in the brain/nervous system compared to everything else?
21:26 < Adifex> Are there any big differences?
21:27 <@kanzure> http://diyhpl.us/~bryan/papers2/longevity/
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21:30 < yashgaroth> the big difference is that neurons don't divide very often, so they tend to die/degrade less from DNA/genome damage and more from protein aggregation
21:32 < Adifex> Thanks for the TED version, yashgaroth.
21:32 < yashgaroth> np, lmk if you need more detail
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22:33 < nmz787_> What a surgeon! He puts his cell number at the bottom!
22:37 < Adifex> I know. He paid good money for that press release too.
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22:51 < heath> http://studiolabproject.eu/
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22:51 < heath> "Studiolab is a 3-year Europe-wide initiative that merges the studio with the research lab. Funded by the European Commission Seventh Framework Programme in 2011, Studiolab is a European network that provides a platform for creative projects that bridge divides between science, art and design."
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--- Log closed Tue Jul 02 00:00:13 2013