2009-02-24.log

--- Day changed Tue Feb 24 2009
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fennhttp://fennetic.net/misc/wishlist02:35
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ybithttp://www.myexperiment.org/05:32
ybitmyExperiment makes it really easy to find, use and share scientific workflows and other files, and to build communities. 05:32
ybit"""05:32
ybithttp://rubyforge.org/projects/myexperiment/05:32
ybithttp://www.youtube.com/watch?v=S8scuDaPM7A05:59
ybit'world's first it specialist'05:59
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kanzurefenn: did you get nathan's email? "Moving Open Manufacturing Forward"06:28
kanzureI know I complain a lot these days, but I hate it06:28
kanzurehe's clearly not a programmer. I was just going to reply with a link to your git repository, but I don't think he will understand06:28
nshlink?07:24
kanzurehis email was just sent to a few of us07:40
kanzureand I've forgotten your email address :)07:40
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kanzurehttp://blog.p2pfoundation.net/a-strategy-to-advance-open-manufacturing/2009/03/0308:42
kanzurewhat the fuck is this shit08:42
kanzureblargh08:42
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kanzureHi nsh.08:44
nshhey08:45
nshwhat's new?08:45
kanzureNot much.08:59
nshno surprise there then08:59
kanzurehttp://brickit.wiki.sourceforge.net/Data+model10:46
kanzurethis doesn't look that bad.10:46
kanzureit's an inventory management system for biobricks,10:46
kanzurewritten in python via django.10:46
kanzurehttp://brickit.wiki.sourceforge.net/10:49
kanzure(obvious todo: interface brickit with our inventory yaml stuff, plus pcr.xml example (which needs to be dumped into yaml too))11:13
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proctothe problem with living inside a vat of flurocarbons14:06
proctoeven if the solution is isotonic14:06
proctofluorocarbons14:06
proctois that our lungs aren't good at pumping liquid in and out14:06
proctothough maybe a pacemaker-like device attached to the diaphragm14:07
proctowould help14:07
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fenncategories.. why bother15:48
fennit's an inventory management system all right15:49
fenni think there's something wrong with the advertising/publicity for openmanufacturing list :P15:51
fennbasically there is none, so the only people that sign up are those who follow p2p or globalswadeshi, this causes a certain type of person with certain interests and skill set to sign up15:52
fennor maybe the real engineers are just lurking15:53
fennsupposedly there are 100+ people signed up?15:53
fennblog post from the Future15:59
kanzurefenn: this is going to sound ridiculously racist, but16:46
kanzureI have observed a trend in bullshitness from italians16:46
kanzureespecially with their influx into WTA, and in particular with respect to p2pfoundation16:46
kanzureperhaps because of the vatican's proximity to their location?16:47
kanzureargh16:54
kanzuremarcin replied to nathan's shitty email16:54
kanzureso now there's a bazillion links to a bazillion different projects16:54
kanzurewhy do we let non-software people be in charge of things that are fundamentally about engineering/software?17:04
kanzureisn't this stupid of us?17:04
fennwho is italian?17:06
fenni think it's that they think they're in charge..17:07
kanzurericardo campa, various other names that I should be able to dig up but that aren't from the om list17:07
kanzurehrm17:07
fennbecause what else is there to do?17:07
kanzuremake videos? :(17:07
fennheh actually i'm fiddling with a webcam right now17:07
fennmplayer is letting me down17:07
fenn(and so is every other frickin webcam software for linux)17:08
kanzureso what can we give these people to do?17:08
kanzureI don't think I can just give the finger to Marcin for making yet another wiki page for a 'blow torch'17:08
fennevangelize, get us funding17:08
fenni dont think marcin's funding strategy is working very well (ask for money from poor people? hah)17:10
fennand that suit.. wtf17:11
fennfarmer/scientists don't wear suits17:11
kanzurethat's marcin?17:12
fenni guess17:17
kanzurehttp://biocad-server.eecs.berkeley.edu/wiki/index.php/BioCad17:20
kanzureoh right, clothos17:20
kanzurehttp://biocad-server.eecs.berkeley.edu/wiki/index.php/Clotho_Development17:21
fenngee those diagrams sure look familiar17:23
kanzurehttp://www.vimeo.com/205045217:25
fennugh17:26
fenn<- hates video17:26
kanzurethis is stupid, the video turns into "video of the screen"17:27
kanzurebut mac doesn't know how to do real screencasting17:27
kanzureso it's just a camcorder shot of the screen17:27
fenni dont know how to do real screencasting either17:27
kanzureit's in the logs in here.17:27
fenniirc it took you a couple days to get it working17:27
kanzureturns out I neglected to realize the interface to the first one17:28
fennand you werent doing anything with opengl17:28
kanzure"istanbul" (you have to click the tray icon to start the recording)17:28
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kanzurefenn: are you around?18:29
fennyes for a bit18:30
fenngoing to http://metalart.meetup.com/23/ at 7 pm18:30
kanzureblah18:30
kanzuredo you want to go to dinner with me and Emil Gilliam, SL4 list snipper?18:30
fennwhen? where?18:30
kanzurechecking18:30
fennwell, i'll probably not be available for at least 2 hours18:31
fennso after nine is cool18:31
kanzurenot going to happen then, nevermind18:31
fennok18:31
fenndoes emil live in town?18:31
kanzuredown the street :)18:31
kanzuretwo blocks.18:31
fenni wonder who did this http://fennetic.net/pub/irc/austin-meetup.png18:38
fennhm that's actually down the road a little18:40
fennor maybe even in the same parking lot..18:40
fenndown the road a bit, that's interesting18:43
fennJerimiah and Brad Stewart18:44
fennprobably jerimiah dowdy18:45
fennInterested in new Meetup Groups about:18:46
fennRobotics, Botany, Math, Dumpster Diving, Community Salvage, Natural Building, Quantum Computing, Cryonics, Bioethics, Particle Physics, Chemistry, Machinist, Biotech, Biology, Neuroscience, Alternative Energy, Science18:46
fennsurely you've met this person already18:46
kanzureno19:10
kanzureI'll have to look into him19:10
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kanzurehttp://heybryan.org/shots/2009-02-24_meetlog.png20:26
kanzuregod I'm such a geek.20:26
bkeroYea20:30
kanzurey-axis is number of people met on that day20:31
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kanzure///21:28
kanzurehttp://heybryan.org/~bbishop/docs/dopamine/kegg_data.txt <- Any ideas on quickly parsing this type of data? Content length is not guaranteed.21:28
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bkerokanzure: switch case + regex?22:37
bkeroLooks like you have tab delineated fields?22:40
kanzureyes22:46
kanzureso, I was thinking of something like check to see if the first character of the line is an uppercase versus a tab22:47
kanzureand then if not, you continue to add values to the last variable? or is there a better way? this way of doing it is way too much of a hack.22:47
kanzureI asked #perl, but nobody knows of a CPAN module that parses this type of format already. blah. CPAN, why haste ye forsaken me?22:48
bkeroYou can write one pretty easily22:50
bkeroMake a data structure, then pass that crap into it22:50
kanzureyes, but then I have to write a checker thingy that would store the name of the last variable or something that was being added into it22:51
kanzurebut yes, a data struct is the way to go here..22:51
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kanzurehttp://heybryan.org/~bbishop/docs/dopamine/enzyme (warning: 23 MB)23:58
kanzurehttp://heybryan.org/~bbishop/docs/dopamine/parseenzyme.pl   (skeleton)23:59

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