2009-06-15.log

--- Day changed Mon Jun 15 2009
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-!- any76091787 is now known as katsmeow-afk07:51
kanzurenice to see david cary posting to om07:53
-!- kanzure changed the topic of #hplusroadmap to: " ... and so was born the Second Law of the Civilized Worlds, which was that Man could not stare too long at the faces of the Computer or her children, and still remain as Man."08:05
-!- kanzure changed the topic of #hplusroadmap to: I am program, programmer, and that which is programmed.08:08
katsmeow-afkwho wrote that first one?08:09
katsmeow-afkmedicinedrum.tribe.net ?08:09
katsmeow-afkDamien Broderick - 2001 - Literary Criticism - 466 pages ?08:10
kanzureDavid Zindell08:11
* katsmeow-afk hasto go salvage parts from two IBM 370 data storage cabinets,, 12inch+ harddrives, 240v powersupplies, 500lbs08:11
kanzure(is the author of both)08:11
kanzurekatsmeow-afk: good luck.08:11
kanzurebring me back a souveniour.08:11
katsmeow-afkthanks08:11
kanzurepreferably not the 500 lb gorilla though08:11
katsmeow-afkprolly useless, but i can retask parts08:11
katsmeow-afkthe pwr supply capacitors in these things are each larger than 10 modern 2.5 harddrives taped together08:12
katsmeow-afkthere's 2 24inch fanfold printers too, scrapped08:13
kanzuretodo: fix find-all-cutsets.py unit test errors08:40
kanzureadd in a few more unit tests from the papers (er, for given successful cutsets I mean)08:40
kanzurethen throw in some code for the extract-state-quations.py script08:41
kanzure*equations08:41
* kanzure waddles off08:41
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ybit"Inkjet Printing of Viable Mammalian Cells" http://dx.doi.org/10.1016/j.biomaterials.2004.04.01109:29
ybithttp://filebin.ca/gprkwz09:33
ybitanyone have access to "Three dimensional MEMS microfluidic perfusion system for thick brain slice cultures." :: http://www.springerlink.com/content/v822077208022653/10:05
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Traveler25http://transhumanistforums.com/hplusroadmapchat/10:57
Traveler25now you have a URL to send people to, with a java applet that lets them connect directly to this chatroom10:58
Traveler25(or did you already have a java chat applet at another URL?)11:00
Utopiahyou can add http://mibbit.com/chat/?server=irc.freenode.net&channel=%23hplusroadmap if you want too, works well11:03
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Traveler25thanks11:07
Traveler25bye11:25
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katsmeow-afkhttp://www.wolfram.com/products/mathematica/newin7/content/IntegratedGenomicAndProteinData/14:55
katsmeow-afkyou can search for Search in wolfram14:55
xp_prghell ya kats!15:20
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kanzurerawr17:32
fennTHUNDARR17:34
fenn(the barbarian)17:34
kanzure804 bytes/sec. all 804 of them!17:38
kanzurethis message took 18 seconds to transmit17:39
kanzureybit: http://adl.serveftp.org/papers/Inkjet%20printing%20of%20viable%20mammalian%20cells.pdf17:42
kanzureybit: http://adl.serveftp.org/papers/%20Three%20dimensional%20MEMS%20microfluidic%20perfusion%20system%20for%20thick%20brain%20slice%20cultures.pdf17:43
kanzure"weird places microfluidics.tar.gz shows up on kanzure's filesystems"17:44
kanzureplace #1: /home/bryan/lab/functionCAD/microfluidics_2009-06-01.zip17:45
kanzureer, did you remove it from /home/bryan/lab/functionCAD/ already?17:46
kanzureso here's a line of output from find-all-cutsets.py17:52
kanzurefunction cutset: graph is  <graph object [1, 2, 3, 4, 5, 6, 7] [(6, 4), (4, 6), (5, 7), (4, 7), (7, 4), (7, 5), (4, 2), (5, 3), (2, 4), (3, 5)]>17:52
kanzurethe first part of the pygraph.graph object is a list of the nodes in the graph17:52
kanzurethe second part is a list of pairs where each pair specifies an edge17:53
kanzurehere's the following line of output from the program:17:53
kanzureremoving: fromNode =  4  toNode =  6 17:53
kanzureer I guess it's important to mention that the order of the nodes in those arc tuples is (from, to). 17:53
kanzureer17:53
kanzureright, so17:54
kanzureit first removes (6,4)17:54
kanzurethen the graph looks like this:17:54
kanzurefunction cutset: graph is  <graph object [1, 2, 3, 4, 5, 6, 7] [(5, 7), (4, 7), (7, 4), (7, 5), (4, 2), (5, 3), (2, 4), (3, 5)]>17:54
kanzurethen it tries to remove (4,6) for some reason17:54
kanzureI'm not quite sure why. obviously pygraph is smart enough (with del_edge()) to delete both backwardly and forwardly17:54
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kanzure:set number18:02
kanzurepstree18:03
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kanzureaddiction: http://sata.serveftp.org/~bryan/vim.txt18:20
kanzure"split" is a nifty tool. don't know how well it operates with --bytes=2147483648 though18:34
* ybit just got back from a long day at work, thanks for the fetching one of the MEMS paper kanzure18:40
kanzurewait, what about the other one?18:40
ybiti already had access to it :P18:41
* ybit had posted the link18:41
kanzurebah.18:41
ybitthanks for it too, happy? ;)18:42
ybittornado siren is going off18:42
kanzurewe don't get our own tornado sirens :(18:42
ybittoo bad it's only 100 yards away from my house18:42
ybiti could die tonight, just to let you all know this 18:43
ybitbecause i'm not taking shelter18:43
kanzureif you give me your coords, the x-jet can be there in 3 minutes 18:43
* ybit wants to eat and read the MEMS paper18:43
ybithaha18:43
xp_prganyone have any video of this inkjet printing of cells?19:01
ybitsorry william, can't find one, didn't really search too hard, but you might try emailing the lead researcher and if he sends some multimedia your way, share it with us :)19:08
ybiti've yet to read it index.ieeexplore.ieee.org/iel5/10/28058/01254003.pdf19:08
ybit"Characterization of Implantable Microfabricated Fluid Delivery Devices"19:08
xp_prgI saw it!19:10
xp_prgits at the bottom!19:10
xp_prgoh man do I want to do that!!!19:11
xp_prgthat just made my whole day19:11
ybitthe bottom of?19:14
ybitcongrats, we both had our whole day made (i wasn't blown away)19:15
ybita few interesting papers listed :: http://www.biochem.mpg.de/mnphys/publications/index.html19:18
kanzureneurotransmitter receptor and field-effect transistor interface19:19
kanzurehah19:19
xp_prgyou weren't blown away, why?19:19
kanzurethat's sufficiently awesome19:19
kanzurexp_prg: because the tornado didn't hit me.19:19
kanzurewhat's so hard to understand19:19
kanzure*hit him19:19
xp_prgkanzure what is this neurotransimitter thing what?19:19
kanzurewhat are you asking?19:19
xp_prgneurotransmitter receptor and field-effect transistor interface19:20
kanzurewhat about it?19:21
xp_prgtell me more about it please, how does that work?19:21
kanzurewell how about you read the paper?19:21
ybitread the paper :P19:21
kanzurehttp://www.biochem.mpg.de/mnphys/publications/09peifro/index.html19:21
kanzurewhat the fuck is wrong with you19:21
kanzuregah19:21
xp_prgkanzure do you understand how the inkjet printer works with cells?19:22
kanzurewhich inkjet printer?19:22
kanzureybit: none of those titles of the abstracts or paper thingies are showing up on google scholar, even the one that was published in 200719:23
kanzureare we sure those papers are published?19:23
xp_prghttp://singularityhub.com/2009/06/08/growing-organs-in-the-lab/19:23
kanzureoh, I haven't read that yet19:23
kanzurehow about you read the paper?19:23
xp_prgyou posted it19:23
kanzureokay?19:23
kanzureyou don't even read my emails19:23
kanzureyou asked me "what's this email about"19:24
xp_prgyes I do!19:24
kanzurebefore even reading it today19:24
kanzureuh?19:24
kanzureI got an email today from some guy named tim asking "what is this about" re: the electronics workbench inventory19:24
xp_prgoh man, you taking the excitement out of this19:24
kanzureit was all over diybio19:24
kanzurewell maybe you should just read the emails first :)19:24
kanzurejust saying. it kind of helps.19:24
kanzureit also makes things more exciting to read.19:24
xp_prgya but electronics workbench to do what?19:24
ybitheh19:24
kanzurewhat the fuck man19:25
kanzureybit: do you understand me?19:25
xp_prgyou mentioned getting an electronics workbench, but you didn't explain what it was for19:25
kanzurewhy not just read wikipedia19:25
ybitkanzure: yup, plenty of info on teh interwebs19:25
kanzureybit: so I think we can agree that I shouldn't have to explain this to xp_prg 19:26
kanzureit doesn't seem particularly hard to understand, or to google or anything19:26
kanzurertfm and stfu19:26
xp_prgkanzure you mentioned getting electronics equipment but you never mentioned what you wanted to use it for *sigh*19:26
kanzureso what?19:26
kanzurewhat does that have to do with reading the email19:26
kanzureall that I said is that you didn't read it19:26
xp_prgI did read it19:26
kanzureyou just said "what is electronics for" or something19:26
xp_prgtoo hard I give up19:27
kanzureok so don't bug me if you're going to give up19:27
kanzurego away19:27
kanzureField-Effect Transistor with Recombinant Potassium Channels: Fast and Slow Response by Electrical and Chemical Interactions 19:28
kanzurehuh Google Scholar is now "Google scholar" for some reason19:29
kanzure(in the logo)19:29
kanzurethat wasn't as cool as I thought it would be19:33
kanzureI thought it would have been a transistor binding to some binding domain on an ion channel protein thingy19:34
kanzure"Imaging neuronal seal resistance on silicon chip using fluorescent voltage-sensitive dye "19:35
kanzure(voltage sensitive dyes are pretty neat in general)19:35
kanzure"Enzyme Induced Staining of Biomembranes with Voltage-Sensitive Fluorescent Dyes "19:35
kanzurehttp://192.168.1.108/svn-co-cmd.sh20:17
kanzurehttp://code.google.com/p/python-graph/downloads/list?can=4&q=&colspec=Filename+Summary+Uploaded+Size+DownloadCount20:39
fennscrood graph theory20:52
kanzurescrood?20:54
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kanzureok, now to make up unit tests that intentionally fail, or something21:03
fennunit tests, then ship it, then "bug fixes" to enable the actual features21:04
kanzuredo we get to charge for the actual features before shipping?21:04
kanzuretodo: run autoscholar science pdf paper reader thingy on giant television (instead of dumb tv)21:05
kanzuregah there's such a thing as a "cycle cutset"21:10
kanzurehttp://commons.wikimedia.org/wiki/File:Cutset-2.svg21:10
kanzureguess that'll be a test21:10
kanzuredah? http://commons.wikimedia.org/wiki/File:Cutset-4.svg21:11
kanzureit's a "decomposition method" apparently21:11
kanzurehow do I find where it is used? "What links here" doesn't have anything really21:12
kanzurebut does that mean that no page includes it as an image?21:12
kanzureor just about linking?21:12
fennuh oh21:15
fennSince you haven't been a student in recent years, it is taking extra time to get your appointment through the system.  I'm hoping that everything will be straightened out by the next go-round.21:15
kanzureuh?21:15
kanzurecan you forward that to me?21:17
kanzureaha. http://en.wikipedia.org/wiki/Decomposition_method_(constraint_satisfaction)?uselang=en thanks #wikipedia21:18
kanzurealthough I'm not happy it leads to an article about constraint satisfaction problems21:18
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DrTreadIs the graph theory gone? Is it safe to come back in teh interwebz nao?22:09
kanzureno22:15
kanzurehttp://en.wikipedia.org/wiki/VLIW22:15
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DrTreadok, i'll stay clear22:25
DrTreadlessee... if we have 256 bit instruction word, we could pretty well take up the known universe with the hash table22:26
DrTreadbut we could compute anything with only a few dozen clock cycles22:27
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kanzurehttp://en.wikipedia.org/wiki/Run-length_encoding23:05
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kanzurehttp://www.faqs.org/rfcs/rfc2705.html23:30
kanzurehi digitaltao 23:30
digitaltaohello there23:30
kanzureyou seem to be in my geographical area, would you like to take over the city with me tomorrow?23:31
kanzurewe launch at dawn.23:31
digitaltaosounds, epic. 23:32
digitaltaonefarious plans are indeed abound. 23:32
digitaltaowho will hack the gibson o_O?23:34
kanzurethe guy with the beard 23:34
kanzure(the unix hacker)23:34
digitaltaoyou have a beard! 23:35
digitaltaoi elect you.23:35
kanzurewoah, hold on that23:35
kanzureer23:35
digitaltao-holding.......23:36
DrTreadkanzure he's right. you DO have a beard. #iranelection has shown you the way.23:41
DrTreadnow start taking over.23:41
digitaltaolulz23:46
digitaltaoanyone in here familiar with the ybox?23:47

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