2011-03-03.log

--- Log opened Thu Mar 03 00:00:10 2011
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dbolseranyone got this real quick:02:00
dbolserhttp://www.nature.com/ncomms/journal/v2/n3/full/ncomms1211.html02:00
dbolserI think I invented this in my mind ;-)02:01
dbolserbut not sure02:01
dbolserok, it's not what I had in mind (supplementary materials are available)02:03
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Utopiahdbolser: Im not surprised Wayne Pennington was unhappy if you suggested his expertise could be replaced by few well tweaked algorithms and good datasets if only he were to confirm it (validating the Kaggle challenge results)03:40
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kanzurehi Zit06:01
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dbolserThe Archon X Prize for Genomics offers a $10 million prize to to the first team that can sequence 100 human genomes within 10 days or less at a total cost of $10,000, with strict criteria for accuracy and completeness.06:12
dbolserUtopiah: heheh06:13
dbolserUtopiah: just sent you a mail06:13
dbolserIn the future when I have your email address to had06:14
dbolserhand06:14
dbolserdid06:15
Utopiahread it and yes, it sounds like "democratization" of, for them, a "serious topic" so again, Im not surprise even if I know it comes from the right mindset06:17
dbolserhttp://www.iris.edu/data/seismograms/06:17
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dbolsertrue, they won't get much out of helping us06:17
dbolserBut they get less from ignoring us imho06:18
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dbolserhttp://www.iris.edu/data/request.htm I just need to get my head round how to do it06:21
Utopiahbut I dont think you should over think it either, I mean finding extra datasets is precisely what Kaggle winners usually do, they use the default datasets provided then to earn extra accuracity link to other datasets they thought might be useful and that they are used to though experience, they dont just limit themselves to the best tweaked algorithm (at least that's what I read in the blog posts of few challenge winners)06:23
dbolseric06:24
dbolserbut I need some data and it should have some quality, else we're doomed06:24
dbolserI'd like the forum to create new data...06:24
dbolseralso, the format has to match the training data06:25
dbolsermeh... I'll try again when I have time06:26
dbolserclicking round and round and not an actual datapoint in sight!06:26
dbolserhttp://www.fdsn.org/06:27
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kanzure_huh guess i'm doing to mardi gras10:28
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kanzure_jrayhawk: google.org money? the only other thing i can think of is GSoC but there's no way you'd be caught dead in a school so i dunno11:52
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kanzure_hi timothyschmidt12:05
timothyschmidtheyo12:05
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kanzure_hi Tyrant12:50
Tyranthey kanzure_12:50
Tyrantwhats up?12:51
kanzure_nothing worth my time12:54
kanzure_Tyrant: i was in palo alto w/ joe because of a 'future of open hardware' workshop i was invited to12:54
kanzure_i took a transcript of the proceedings:12:54
kanzure_http://diyhpl.us/~bryan/irc/iftf_open_hardware_future_workshop.html12:54
kanzure_oh i linked you to that already, oops12:54
Tyrantyeah thank you for that12:55
TyrantI'm going to be focusing mostly on open science first, why we need it, etc.12:56
Tyrantand a few examples of people outside of industry and universities doing amazing things12:56
Tyrantthen go over some scientific instruments like my mass spec, the AFM, etc. that should be so much cheaper12:57
kanzure_i don't know what you are talking about12:57
kanzure_but i assume a BIL presentation12:57
Tyrantyeah12:57
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kanzure_"One side comment though is, Humanity+ is under no obligation to raise $$ for these prizes, we've merely agreed to host the prizes on our website & in our bank account & to manage the judging."13:59
kanzure_oh god.13:59
kanzure_this is stupid.13:59
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kanzure_andy ellington on diybio: http://www.the-scientist.com/news/display/58035/14:11
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kanzure_http://ellingtonlab.org/blog/2010/07/01/on-fabs-and-dna-hacking-5/14:12
kanzure_new page added: http://diybio.org/safety/biosafety-resources14:14
kanzure_chemical compatibility app http://itunes.apple.com/us/app/chemical-compatibility-database/id408288716?mt=814:15
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kanzure_i wonder why andy is so focused on diybio14:28
kanzure_he was very hostile when i emailed him about something totally unrelated to diybio, and responded with some anti-diybio statements14:28
kanzure_but now i'm wondering if he's one of the anonymous people on the list :P14:29
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kanzure_hi QuantumG14:52
QuantumGhey14:53
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Guest13231Hullo15:22
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kanzure_hi Zit16:11
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kanzure_hi phillyj16:26
phillyjhi16:26
phillyjnothing new, needed some latex help so i logged in freenode16:27
kanzure_ha ha ha16:37
kanzure_"andrew hessel is the justin bieber of synthetic biology"16:37
kanzure_http://www.youtube.com/watch?v=bRbCIduMGb016:37
kanzure_oh man, joseph sucks at video editing16:39
kanzure_it seems to be screen capture plus him clicking a key to do looping?16:40
QuantumGnah, I suck at video editing16:44
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JayDugger1Good night, everyone.17:31
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kanzure_?? why is natasha vita-more creating a facebook page for the gada prizes17:46
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kanzure_http://tech.slashdot.org/story/11/03/03/2143249/Timezone-Maintainer-Retiring#comments18:43
kanzure_"18:43
kanzure_You know you're awesome when IANA have to develop a transitioning strategy when you retire.18:43
kanzure_hi thesnark18:58
thesnarkhey kanzure :D18:58
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Tyrantkanzure_, media pariah?19:12
kanzure_what?19:13
Tyrantregarding natasha vita-more creating the gada prize page19:16
Tyrantsorry should be more specific answering to stuff late19:16
kanzure_i don't know what 'media pariah' means19:16
kanzure_but all i know is that her images looked awful19:16
kanzure_for a designer she doesn't seem to know much about good font choices19:16
Tyrantshe tries to get her image out there a lot19:17
Tyranti think she just created it so that it would be associated with her19:18
kanzure_no i think someone assigned the task to her19:18
kanzure_but i don't know why they would do that19:18
Tyrantah i see19:18
Tyrantwhats the link?19:19
kanzure_it's just an email. doesn't matter yet19:19
kanzure_this doesn't matter at all, actually19:19
kanzure_shouldn't you be uploading mass spec schematics and CAD files19:19
Tyranti should be getting my presentation finalized and working on schematics, yes19:21
Tyrant:)19:21
kanzure_imho presentation is of lower priority than uploading schematics and CAD files19:21
Tyrantim still a ways away from that19:21
Tyrantthe early stages of development will be semi-super sekret19:22
Tyrantuntil i figure out the patent liabilities19:22
kanzure_uh19:22
kanzure_just so you know,19:22
kanzure_that's inappropriate and wrong of you.19:23
Tyranthow so?19:24
kanzure_secrecy breeds secrecy19:24
kanzure_best to just be open from the beginning19:24
kanzure_instead of lying about being open19:24
kanzure_*of being open source19:24
Tyranttrue, but its a pitfall i'll have to avoid19:25
kanzure_you're not off to a good start :P19:25
Tyranthaha19:25
Tyrantwell I'd like to be able to manufacture mass specs, not just make an open source one19:26
Tyrantand for that i really need to know what the patent situation is19:26
Tyrantand 'super sekret' means i won't be making a public web page for it19:26
Tyrantplenty of people will still have it though19:26
kanzure_sounds like bullshit to me19:27
kanzure_just because you're manufacturing it doesn't mean it shouldn't be in a revision controlled repository with a permissive license19:27
Tyrantif it sounds like bullshit to you then you can interpret it as such. fact of the matter stands that i'll be screwed before i even start if i get sued19:28
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kanzure_i don't see what that has to do with anything i just said19:28
kanzure_please re-read my comments19:28
Tyrantsorry yeah misread. they will be in a repository19:29
Tyrantjust not at first19:29
kanzure_yeah, that's wrong.19:29
Tyrantby the time i can actually manufacture and sell, they definitely will be19:29
kanzure_haha why would anyone believe you19:29
kanzure_what a scam.19:30
Tyrantheh19:31
Tyrantwell if thats the way you feel you are welcome to have nothing to do with it19:31
kanzure_it's almost as bad as openpcr19:31
kanzure_just don't lie and call it open source if you're not sharing it and being all s3kr1t19:32
kanzure_we call that a trade secret19:32
Tyrantthe benefit i have from making it all 's3kr1t' at first is developing without having to worry about any patent conflicts19:32
Tyrantbut i gain no benefit from keeping it closed source after i have a handle on them19:33
kanzure_but you see, your patent fears are bullshit right now because you're not selling anything19:33
kanzure_let's put it this way,19:33
kanzure_if patents didn't exist, i think you still wouldn't really be open source19:33
kanzure_what do you think? if patents weren't an issue19:33
Tyranti would make it open source from the start19:34
kanzure_ok right19:34
kanzure_if you're truly worried about patents here,19:34
kanzure_you release the schematics as Alex Kiselev and under some permissive license19:34
kanzure_and manufacture it as a corporate entity (of some kind or another)19:35
kanzure_if anything the company would be sued, not you19:35
kanzure_while patent law trumps copyright law, patent law can't trump your artistic rendering of schematics and CAD files19:35
Tyranthmm19:36
Tyrantnow that sounds like bullshit19:38
Tyrantbut i know an ip lawyer19:38
Tyranti'll talk to him in depth19:38
Tyrantif he's sure that i cant get sued over open source cad/schematics/etc then ill make it open source right away19:38
kanzure_that's what LLCs are for, anyway19:38
kanzure_note: if you publish *someone else's work* with a different license, then you're doing something illegal19:39
kanzure_but so far all you're talking about is schematics/CAD based on patents19:39
kanzure_(patent documents are in the public domain)19:39
Tyrantwhat constitutes someone else's work though19:39
Tyrantbased on published research19:39
kanzure_someone else's CAD file or schematic, copied verbatim19:39
kanzure_i.e. a copyright law violation19:39
Tyrantah no I don't have any of those19:40
Tyrantshitty scientific journal diagrams is mostly what i Have19:40
kanzure_if you sublicense someone's patent for $100k/year, and they give you an exclusive license to some CAD files, and you re-license those ==> illegal19:40
Tyrantlike i said dont have any cad files from others19:41
Tyrant:)19:41
TyrantDoes the usual software licenses extend to hardware or do i have to use something else like ohanda?19:42
Tyrant*OSHA19:42
kanzure_people have been using GPL for hardware19:42
kanzure_some people on thingiverse use Creative Commons CC-BY-SA for hardware19:43
kanzure_others use TAPR.. honestly, GPL or CC-BY-SA should be ok for now19:43
kanzure_OHANDA is more of a trademark, not a license19:43
kanzure_("the OHANDA group is pretty sure this meets most of the definitions of open source, so it gets to use the OHANDA stamp of approval")19:43
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ybitkanzure_, fenn_22:19
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ybitthoughts on skdb?22:21
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ybit:D22:21
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