--- Log opened Mon Apr 11 00:00:10 2011 | ||
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dbolser | heheh, kanzure did you see Jongs email to bio.cc server interface? | 01:09 |
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splicer | On the 'citizen science quaterly' idea: quite amitious to try to start a print mag | 01:54 |
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fenn | hum. what's the ieee publication that all the cool stuff is in | 05:05 |
fenn | maybe it's just that they're all hosted on ieeexplore.ieee.org so i think they're the same journal | 05:06 |
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dbolser | kanzure, Utopiah: I worked out how to give you guys access to this 'proxy' | 06:31 |
dbolser | fenn: do you need institutional access / do you have a bifx.org account? | 06:32 |
dbolser | if you do, I may be abel to hook you up | 06:32 |
fenn | i don't have bifx.org account | 06:34 |
fenn | oh i need to pay $75 for a shell account | 06:39 |
fenn | one of these days i will find an unsecure port at stanford or something | 06:41 |
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fenn | i have a wrt54g sitting around being useless; could put linux on it and act as a gateway | 06:42 |
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kanzure | fenn: bifx.org doesn't cost anything | 09:06 |
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fenn | how do you get shell access then? | 09:10 |
fenn | anyway if you want to do me a favor, plz grab ieee image processing, computer graphics, robotics, sensors, and signal processing | 09:15 |
fenn | there is also some bio stuff for some reason | 09:17 |
fenn | ooh and computer vision | 09:18 |
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kanzure | fenn: you ask dbolser for an account :p | 09:21 |
dbolser | is that how it works? | 09:23 |
* dbolser create an account for fenn in that case | 09:23 | |
dbolser | kanzure: did you see the email from jong? looks like you made an error | 09:23 |
* dbolser searches for the right useradd commands to 'fit' bifx.org | 09:26 | |
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dbolser | bash or tcsh? | 09:31 |
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kanzure | dbolser: i made an error? | 09:32 |
kanzure | dbolser: fenn uses bash | 09:32 |
dbolser | kanzure: yeah, I got an email from jong about why bio.cc was down | 09:32 |
dbolser | ty | 09:33 |
dbolser | apparently you put a symlink to / in /var/www, or whereever | 09:33 |
kanzure | oh shit | 09:33 |
kanzure | i hope i didn't | 09:33 |
dbolser | #-) | 09:33 |
kanzure | How To Crash A Server | 09:33 |
dbolser | I'll forward you the mail, but he signs off 'sorry for the inconvenience' | 09:34 |
dbolser | so I guess he knows it was a mistake | 09:34 |
kanzure | :( | 09:34 |
dbolser | not to worry, it's being fixed | 09:35 |
kanzure | that must've been 2 or 3 years ago | 09:35 |
dbolser | gmail is slooo | 09:36 |
kanzure | got the email | 09:36 |
kanzure | looks serious | 09:36 |
dbolser | don't know, I'm replying now to the 'who is kanzure' part, I'll ccyou | 09:37 |
dbolser | you can enquire more, but I'm guessing its done with now | 09:37 |
kanzure | yeah i'll apologize | 09:37 |
dbolser | ok, sent that, cc you | 09:39 |
dbolser | OK, on bifx.org, I've done "ssh -D 23456 me@mpimg.server" | 09:43 |
dbolser | this means that, while on bifx.org, you can use port 23456 as a socks5 proxy via the mpimg server | 09:43 |
dbolser | so... on your local box, you can do "ssh -L 23456:localhost:23456 dmb@bioinformatics.org", then use foxyproxy to steer your browser via localhost:23456, and you should have all the access you need | 09:45 |
dbolser | fenn: I would grab those jrnls for you, but writing wget scripts is a hastle | 09:45 |
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fenn | thanks, sorry i was just playing around with rapleaf, stalking you :P | 09:46 |
dbolser | me? | 09:47 |
dbolser | can you log in? | 09:47 |
dbolser | http://www.hashemian.com/whoami/ now gives me 141.14.19.121 (using foxyproxy as described) | 09:48 |
dbolser | the only problem is, I think the "ssh -D" command may be 'fragile', the only way to find out is for you guys to thrash it | 09:49 |
kanzure | did you give fenn a password | 09:49 |
dbolser | yes | 09:49 |
kanzure | ah | 09:49 |
kanzure | i missed taht | 09:49 |
dbolser | I kept it quiet ;-) | 09:49 |
kanzure | >> Did you decide if you are going to participate? | 09:50 |
kanzure | me>Yes, I will not be participating this time. | 09:50 |
kanzure | "Bryan, Please send me your talk title, abstract and bio - both 250 words. I need this today." | 09:50 |
kanzure | what the fuck | 09:50 |
dbolser | do you know if "ssh -D n" run as me works for other users? | 09:50 |
kanzure | hmm | 09:50 |
dbolser | I read that first as 'yes I will' | 09:51 |
fenn | asdfasdf | 09:51 |
dbolser | seems someone is using it now... | 09:51 |
dbolser | (ssh -vvvv) | 09:51 |
fenn | i'm in the basement with spotty wifi | 09:51 |
fenn | or something like that | 09:51 |
dbolser | thumbs1.ebaystatic.com | 09:52 |
dbolser | ? | 09:52 |
dbolser | perhaps that was just an ad in my browser | 09:52 |
* dbolser disables foxyproxy | 09:53 | |
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fenn | ieee wants me to sign in, when browsing from bifx.org | 09:55 |
kanzure | fenn: btw, cysteine has access to a variety of publishers | 09:56 |
fenn | good to know | 09:56 |
dbolser | fenn: can you give a link? | 09:56 |
kanzure | i think dbolser specifically has access to elsevier | 09:56 |
fenn | was i supposed to do something with ssh -D? | 09:56 |
fenn | (example) http://ieeexplore.ieee.org/xpl/freeabs_all.jsp?arnumber=5724116 | 09:56 |
dbolser | I think its elservier + a bunch of others like nature and science | 09:56 |
dbolser | fenn: yup | 09:57 |
dbolser | oh wait, no | 09:57 |
dbolser | le me explain | 09:57 |
dbolser | ssh -D starts a socks proxy from bifx.org to the mpimg server when I log in there | 09:57 |
dbolser | you can then either brows on bifx.org using localhost:23456 as the proxy | 09:57 |
dbolser | or browse on your local box after issuing ssh -L 23456:localhost:23456 fenn@bioinformatics.org | 09:58 |
dbolser | again, using localhost:23456 as the proxy | 09:58 |
fenn | ok | 09:58 |
dbolser | but I get a sign in yup :( | 09:58 |
dbolser | still, I'd be interested to know if you guyst can use this | 09:59 |
dbolser | what do you see here: http://ieeexplore.ieee.org/Xplore/accessinfo.jsp | 10:06 |
fenn | i dont think the proxy is working | 10:07 |
dbolser | let me start it as root | 10:08 |
dbolser | hmm... that fails to pick up my ssh key | 10:09 |
fenn | "sign in with your institutional or individual account for access to full text..." | 10:10 |
kanzure | fenn: try http://www.hashemian.com/whoami/ | 10:10 |
dbolser | if it isn't working, you should get a blank page | 10:11 |
fenn | i was using ip-adress.com; elinks didnt seem to notice the HTTP_PROXY env variable | 10:11 |
fenn | chrome just farts itself | 10:11 |
kanzure | wget might respect HTTP_PROXY | 10:11 |
kanzure | which is also useless | 10:12 |
dbolser | I use firefox / foxyproxy | 10:12 |
dbolser | very reliable | 10:12 |
fenn | wget doesn't care either | 10:12 |
dbolser | yeah | 10:12 |
fenn | oops forgot maybe i was running it on the wrong screen window | 10:13 |
fenn | nope, same | 10:13 |
fenn | why is your dns server thumbs1.ebaystatic.com? | 10:14 |
fenn | oh nm | 10:15 |
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kanzure | fenn: oh try http_proxy (no caps) | 10:16 |
kanzure | export http_proxy=http://10.203.0.1:5187/ | 10:16 |
kanzure | er, in this case, not that ip address | 10:17 |
kanzure | then try wget | 10:17 |
fenn | Connecting to localhost|::1|:23456... connected. | 10:18 |
fenn | Proxy request sent, awaiting response... No data received. | 10:18 |
fenn | Retrying. | 10:18 |
kanzure | you should try telnet localhost 23456 | 10:19 |
fenn | why the hell do they list the variables in all caps if they want them in lowercase | 10:19 |
fenn | telnet connects but drops as soon as i send anything | 10:20 |
dbolser | fenn: is that wget? | 10:22 |
fenn | yes | 10:23 |
dbolser | remember your talking to a socks proxy | 10:23 |
dbolser | I didn't get wget to work via proxy yet :( | 10:23 |
fenn | i don't know anything about socks | 10:23 |
kanzure | fenn: curl --socks5 localhost:23456 google.com | 10:24 |
fenn | well, that seems to work, curl is kinda dumb though | 10:26 |
kanzure | check out runsocks http://linux.maruhn.com/sec/runsocks.html | 10:26 |
dbolser | I was thinking, perl scripting is prolly the way to go | 10:26 |
fenn | hashemian.com says i am <b>REMOTE_HOST:</b> markov.molgen.mpg.de<br / | 10:27 |
dbolser | a few tweeks in the wget 'pipeline' I posted on gist, and it could start getting everything from elservier, jrnl by jrnl | 10:27 |
kanzure | i.e. runsocks lynx goodtogo | 10:27 |
dbolser | fenn: good | 10:27 |
kanzure | fenn: yep that looks right | 10:27 |
dbolser | g2g | 10:27 |
dbolser | I'm just going to kill the proxy and start it under screen | 10:27 |
dbolser | ... | 10:27 |
dbolser | doen | 10:28 |
dbolser | done | 10:28 |
fenn | ok i see. you weren't running a http proxy at all | 10:31 |
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fenn | right. well i don't need proxying anyway, perfectly happy with shell access | 10:34 |
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* fenn rides his bike | 10:38 | |
kanzure | Ash got on his bike! | 10:38 |
kanzure | http://i.ytimg.com/vi/2PZg7dT2LKY/0.jpg | 10:39 |
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kanzure | lolwut http://www.toysrus.com/product/index.jsp?productId=3766438 | 17:04 |
kanzure | including TBE buffer | 17:04 |
kanzure | "Enzymes" | 17:04 |
kanzure | pipettes | 17:04 |
kanzure | and a centrifuge of some kind? | 17:05 |
kanzure | seem to be some random toy maker.. http://replay.waybackmachine.org/20080501222501/http://www.edu-science.com.hk/sc_webcat/ecat/cms_view.php?lang=1&id=3 | 17:09 |
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JayDugger | Good morning, everyone. | 17:55 |
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fenn | yay 23andme woooo | 20:16 |
fenn | apparently my whole family doesn't want to know what horrible diseases are in store for them, so i have to do this alone | 20:16 |
kanzure | "Sudden Death Syndrome" | 20:19 |
kanzure | "participants with this SNP showed a 100% chance of dying in the future" | 20:19 |
kanzure | tough shit, fenn :/ | 20:20 |
fenn | " | 20:20 |
kanzure | """ | 20:20 |
fenn | "this SNP has 4 subtypes" | 20:20 |
kanzure | hmm | 20:20 |
fenn | (100% of the sampled population have this SNP) | 20:21 |
fenn | except it's more like "gradual death syndrome" | 20:21 |
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kanzure | fenn: conspiracy theory of the week is that little tiny kids were piloting fighter jets in the 50s and that these are the roswell ufos | 21:06 |
kanzure | thought you might enjoy that one.. | 21:06 |
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movvy | herro | 21:35 |
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kanzure | hi movvy | 21:48 |
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--- Log closed Tue Apr 12 00:00:01 2011 |
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