2012-05-14.log

--- Log opened Mon May 14 00:00:09 2012
-!- strages_home [~strages@adsl-98-81-19-3.hsv.bellsouth.net] has quit [Ping timeout: 252 seconds]00:01
-!- jmil [~jmil@c-68-81-252-40.hsd1.pa.comcast.net] has quit [Quit: jmil]00:52
-!- Mariu [Jimmy98@89.41.57.33] has joined ##hplusroadmap01:00
-!- Dr_K_line [~userid@c-24-61-126-211.hsd1.nh.comcast.net] has quit [Ping timeout: 244 seconds]01:26
-!- yashgaroth [~f@cpe-66-27-117-179.san.res.rr.com] has quit [Quit: Leaving]01:30
-!- sylph_mako [~mako@118-93-18-64.dsl.dyn.ihug.co.nz] has quit [Quit: Leaving]01:35
jennicidekanzure, are you awake?01:56
-!- sylph_mako [~mako@118-93-18-64.dsl.dyn.ihug.co.nz] has joined ##hplusroadmap02:17
-!- sylph_mako [~mako@118-93-18-64.dsl.dyn.ihug.co.nz] has quit [Ping timeout: 248 seconds]02:59
-!- sylph_mako [~mako@118-93-18-64.dsl.dyn.ihug.co.nz] has joined ##hplusroadmap03:03
-!- sylph_mako [~mako@118-93-18-64.dsl.dyn.ihug.co.nz] has quit [Quit: Leaving]03:13
-!- ThomasEgi [~thomas@pppdyn-33.stud-ko.rz-online.net] has joined ##hplusroadmap03:28
-!- ThomasEgi [~thomas@pppdyn-33.stud-ko.rz-online.net] has quit [Changing host]03:28
-!- ThomasEgi [~thomas@panda3d/ThomasEgi] has joined ##hplusroadmap03:28
-!- chris_99 [~chris@unaffiliated/chris-99/x-3062929] has joined ##hplusroadmap05:33
-!- joshcryer [~g@unaffiliated/joshcryer] has quit []05:57
-!- strages_home [~strages@adsl-98-81-19-3.hsv.bellsouth.net] has joined ##hplusroadmap05:58
-!- Proteus1 [~Proteus@67-3-161-190.omah.qwest.net] has joined ##hplusroadmap06:04
-!- Proteus [~Proteus@unaffiliated/proteus] has quit [Ping timeout: 255 seconds]06:04
@kanzurejennicide: somewhat06:05
jennicideIf philosophers concede Bunge's binary conception of knowledge, then it follows that knowledge of multiple subsets of knowledge are commonsensical.06:10
jennicidehow does that read06:10
jennicideIf one were to accept Bunge's binary conception of knowledge, then it follows that knowledge of multiple subsets of knowledge are commonsensical.06:10
jennicideis06:10
-!- chris_99 [~chris@unaffiliated/chris-99/x-3062929] has quit [Quit: Leaving]06:11
@kanzurejennicide: it reads like a philosophy paper06:13
jennicideit is06:13
chevbirdkanzure: do you sleep?06:13
jennicideIf one were to accept Bunge's binary conception of knowledge, then it follows that knowledge of multiple subsets of knowledge is commonsensical as it is not scientific. As such, the argument should be framed to appeal to an individual's commonsense.06:13
@kanzurechevbird: only with women, etc. etc.06:17
@kanzurejennicide: do you mean "is as commonseniscal as not scientific"?06:18
jennicideIf one were to accept Bunge's binary conception of knowledge, then it follows that knowledge of multiple subsets of knowledge is commonsensical, because it is not scientific knowledge. As such, the argument should be framed to appeal to an individual's commonsense.06:19
@kanzure"the argument" being.. accepting his notion?06:20
jennicideoh06:21
jennicideAs such, the argument for philosophically derived knowledge should be framed to appeal to an individual's commonsense.06:22
-!- superkuh [~superkuh@unaffiliated/superkuh] has quit [Quit: the neuronal action potential is an electrical manipulation of reversible abrupt phase changes in the lipid bilayer]06:26
-!- chris_99 [~chris@unaffiliated/chris-99/x-3062929] has joined ##hplusroadmap06:26
@kanzure"Unlike scientific knowledge, an argument for philosophically derived knowledge-- such as Bunge's binary conception of knowledge-- should be framed to appeal to an individual's commonsense."06:28
jennicidebunge's conception of knowledge doesnt really include a space for philosophically derived knowledge06:29
jennicidenot implicitly06:29
jennicideim just kind of shoe horning it in06:29
-!- superkuh [~superkuh@unaffiliated/superkuh] has joined ##hplusroadmap06:32
* nsh offers around a plate of complementary hyphens06:33
@kanzurensh: what's up? i saw your distress signal the other day06:36
nshdealing with a few health issues06:38
nshgam zeh ya'avor06:38
-!- jmil [~jmil@2607:f470:8:3148:a939:3abe:a05d:7ca4] has joined ##hplusroadmap07:00
-!- _0bitcount [~ulises11@81.61.209.167.dyn.user.ono.com] has joined ##hplusroadmap08:37
-!- chillyvanilly [~chillyvan@207.178.197.130] has joined ##hplusroadmap08:48
-!- azonenberg [~azonenber@2001:470:888b:2:206:70ff:fe01:46] has quit [Remote host closed the connection]08:59
-!- ThomasEgi [~thomas@panda3d/ThomasEgi] has quit [Ping timeout: 252 seconds]09:24
-!- augur [~augur@208.58.5.87] has quit [Remote host closed the connection]09:25
-!- ThomasEgi [~thomas@pppdyn-5b.stud-ko.rz-online.net] has joined ##hplusroadmap09:36
-!- ThomasEgi [~thomas@pppdyn-5b.stud-ko.rz-online.net] has quit [Changing host]09:36
-!- ThomasEgi [~thomas@panda3d/ThomasEgi] has joined ##hplusroadmap09:36
-!- nmz787 [~Nathan@cpe-67-242-177-23.rochester.res.rr.com] has joined ##hplusroadmap10:00
-!- augur [~augur@206.196.185.153] has joined ##hplusroadmap10:14
@kanzurewin 610:16
@kanzuredasdasfadasdasdfasda10:16
@kanzurejrayhawk: i've been using p/n i swear10:16
jrayhawkha ha ha10:17
@kanzuremaybe i should tie it to some financial incentive10:18
@kanzureevery time i use /win, irssi will transfer money from my account to yours10:19
@kanzurehowever, this might just incentivize me to not switch windows at all10:19
jrayhawkYou can also use /window move to shuffle your most-used windows closer to eachother.10:20
@kanzureyep, i have them clustered10:20
@kanzurei try to avoid moving over 'active' windows that i don't intend to immediately respond to10:20
@kanzurethis way, the notifications are still pending10:20
jrayhawkalt-1 through alt-9 are also faster than /win10:21
@kanzurealt-n is tied into my gnome-terminal session10:22
jrayhawkassuming you're not foolishly attempting to use screen10:22
@kanzurei suppose i should setup different gnome-terminal profiles with different keyboard bindings, one for the session with ssh/irssi10:23
jrayhawkwindow management functions should really use Super_L instead of alt10:23
@kanzuretrue i sorta ignore that key for some reason10:24
@kanzurethis is stupid, if i had enough monitors i wouldn't need hidden windows10:24
jrayhawki like that attitude10:24
@kanzurei want something like this for rotating out a certain monitor in my 10-set:10:26
@kanzurehttp://www.youtube.com/watch?v=2L03za762jA#t=210:26
@kanzurepossibly better example: http://www.youtube.com/watch?v=ol_sFbcKekM#t=1610:28
jrayhawkhttp://www.ergotron.com/ stepper motors+ergotrons+face tracking to keep the monitors perfectly aligned10:31
-!- splicer [~ubuntu@c83-255-190-140.bredband.comhem.se] has quit [Ping timeout: 245 seconds]10:32
nmz787i read something crazy eariler about what i think was implying something like quantum entanglement between DNA/genes, their mRNA, and subsequently proteins... as well as between chromosomes of a multicellular body10:35
nmz787http://www.emergentmind.org/gariaevI3.htm10:35
nmz787i have no idea if its prodigal genius that most normal ppl couldn't possibly understand for another 100 years10:36
nmz787or if its just quackery10:36
@kanzurejrayhawk: http://www.forecast-consoles.com/products/sightline/mounting_options is a wall-rail mounting system, but i'm not convinced10:38
@kanzurejrayhawk: i'm not satisfied until individual monitors are under mechanical control and can be switched out via the keyboard10:39
nmz787"Controlling metabolism by IR laser beams and DNA functioning10:39
nmz787by maser beams?"10:39
nmz787sect 6, pg 34 http://www.emergentmind.org/PDF_files.htm/conscholo0302.PDF10:39
jrayhawkwhy do you want to swap them out, anyway10:40
@kanzurejrayhawk: i have a limited field of vision. i could rotate my chair and possibly surround myself with monitors, but there is still a physical limit to how many monitors can be stuffed in front of me10:41
@kanzurei suppose at that point, virtual desktops are okay :/10:42
@kanzurehttp://www.stocktradingtogo.com/wp-content/uploads/2007/09/multi-monitor-setup.jpg identify the blue bottle!10:43
nmz787how big and how many panels you have now?10:43
@kanzuresadly i am down to two, but at one point i had seven-ish10:44
@kanzureoh, sorry, three right now10:44
jrayhawkhttp://www.omgwallhack.org/home/jrayhawk/img/hovel/20120512_008.jpg NOT ENOUGH10:44
-!- splicer [~ubuntu@c83-255-190-140.bredband.comhem.se] has joined ##hplusroadmap10:45
@kanzurei spy with my little eye.. a bad taste in shoes10:45
ThomasEgiepic picture10:45
nmz787The basic theme of this evolution would be the gradual de-entanglement.10:46
nmz787The ancient world has survived in fairy tales. In this world remote mental10:46
nmz787interactions like telepathy, remote healing, and witchcraft were every-day life.10:46
nmz787Incredible-to-us physical feats like building of pyramids might have been made10:46
nmz787possible by the liberation of energy and coherent momentum in the formation of10:46
nmz787collective bound state entanglement. The rhytmic work songs helping to gener-10:46
nmz787ate body synchrony are a remnant from this period, but are not sung in modern10:46
nmz787IT companies.10:46
nmz787hah, kanzure, we need a rhythmic work song10:47
@kanzuresounds like quackery to me10:47
jrayhawki liked those composite-toe shoes10:48
@kanzurealso, nmz787 was kind enough to fetch that DNA stability paper10:48
@kanzurehttp://diyhpl.us/~nmz787/instability%20and%20decay%20of%20the%20primary%20structure%20of%20DNA.pdf10:48
nmz787Inhibition by various neurotransmitters could be seen as a measure for the degree of de-entanglement. Inhibition acts as the filter, which de-entangles the brain from other brains and the body from the bodies of other life forms. During hallucinatory experiences, generated by say drugs, inhibition "fails". The degree of inhibition indeed increases, as one climbs along evolutionary tree and in human brain most of the neural acti10:50
nmz787(this paper mentioned the other paper i posted first, which talks about bio-entanglement on different abstract levels)10:50
nmz787(i.e. cell to cell, cell of multicellular organism being able to regenerate another multicellular organism... gene to RNA to protein)10:51
@kanzure"It is therefore as incredible as the report of bacterial growth at 250 degrees Celsius" neat10:52
nmz787(though it was also implying that they were physically entangled via quantum mechanics as well as abstractly/ideologically entangled)10:52
Mariuwon't those HDDs screw those CRT monitors ?10:52
@kanzurewait, i'm pretty sure we know of some bacteria that can grow at atleast 50C,right?10:52
nmz787deep sea thermal vents10:53
nmz787dunno what temp they are10:53
@kanzureyeah.. but that's def. not 250C10:53
@kanzureoh geeze.. 407C10:53
nmz787wiki says thermophiles up to 122C10:53
@kanzuremaybe those thermal vent thermophiles were only recently discovered in the 90s10:54
@kanzurenope.. "Hyperthermophiles were first discovered by Thomas D. Brock in 1969, in hot springs in Yellowstone National Park, Wyoming."10:55
@kanzure"An extraordinary heat-tolerant hyperthermophile is the recently discovered Strain 121[2] which has been able to double its population during 24 hours in an autoclave at 121°C (hence its name); the current record growth temperature is 122°C, for Methanopyrus kandleri."10:55
jrayhawkMariu: not a whole lot; hard drive magnets are pretty small. far more annoying is poorly shielded monitors interfering with eachother with radiation.10:55
@kanzure"However, it is thought unlikely that microbes could survive at temperatures above 150°C, as the cohesion of DNA and other vital molecules begins to break down at this point"10:55
Mariugot it, jrayhawk10:56
nmz787kanzure: 2.  Baross J A ,  D e m i n g  J W  (1983)  G r o w t h   o f  " b l a c k  s m o k e r "  b a c t e r i a  a t  t e m p e r a t u r e s   o f  a t  l e a st  250"C.  N a t u r e   ( L o n d o n )   3 0 3 : 4 2 3 - 4 2 610:56
jrayhawkIn general, Sonys and Viewsonics are pretty good at shielding both in and out.10:57
nmz787kanzure: Ba ros s  JA,   D e m i n g  JW,   Be cke r  R R   (1984)  E v i d e n c e  f o r  m i c r o b i a l  g r owt h   in  high-pr e s sur e , h i g h - t e m p e r a t u r e   e n v i r o n m e n t s .   In:   K.tug M J ,   R e d d y   C A  (eds)  C u r r e n t   p e r s p e c t i v e s   in  m i c r o b i a l  e cology.  A m   Soc  Mi c r o b i o l ,  Wa s h i n g t o n ,   DC ,   pp  1 8 6 - 1 9 510:57
@kanzureah i see10:57
@kanzurejrayhawk: i never had trouble with my ancient viewsonics. </anecdote>10:58
@kanzurebosslab should totally team up with "boston science club for girls"10:59
nmz787http://www.nature.com/nature/journal/v303/n5916/abs/303423a0.html10:59
-!- chris_99 [~chris@unaffiliated/chris-99/x-3062929] has quit [Read error: No route to host]11:00
-!- chris_99 [~chris@unaffiliated/chris-99/x-3062929] has joined ##hplusroadmap11:01
@kanzurenmz787: was it disproven?11:01
nmz787http://diyhpl.us/~nmz787/growth%20of%20black%20smoker%20bacteria%20at%20temperatures%20of%20at%20least%20250%20celsius.pdf11:03
@kanzureoh neat, we've cultured bacteria from a depth of 10,476 meters? go science..11:03
jrayhawkDegaussing poorly shielded monitors right next to eachother is fun, though.11:10
Mariu:p11:11
nmz787http://matpitka.blogspot.com/11:12
-!- Cat4D [433456da@gateway/web/freenode/ip.67.52.86.218] has joined ##hplusroadmap11:13
-!- Cat4D [433456da@gateway/web/freenode/ip.67.52.86.218] has quit [Ping timeout: 245 seconds]11:17
-!- klafka1 [~klafka@c-24-6-19-91.hsd1.ca.comcast.net] has joined ##hplusroadmap11:26
-!- chris_99 [~chris@unaffiliated/chris-99/x-3062929] has quit [Quit: Leaving]11:31
-!- strages_home [~strages@adsl-98-81-19-3.hsv.bellsouth.net] has quit [Ping timeout: 248 seconds]11:38
@kanzurehttp://www.kickstarter.com/projects/joylabs/makey-makey-an-invention-kit-for-everyone11:39
@kanzurehrm. this feels like a media lab thing.11:40
klafka1oh of course11:42
-!- delinquentme [~asdfasdf@c-24-3-85-154.hsd1.pa.comcast.net] has joined ##hplusroadmap11:43
delinquentmehio all~ =]11:43
-!- augur [~augur@206.196.185.153] has quit [Remote host closed the connection]11:49
Mariuhey =]11:50
-!- chris_99 [~chris@unaffiliated/chris-99/x-3062929] has joined ##hplusroadmap11:52
nmz787i guess this disproves all of those water memory and homeopathy papers http://www.nature.com/nature/journal/v434/n7030/full/nature03383.html11:57
klafka1homeopathy was disproven? holy crap12:14
nmz787I just don't understand how people can uphold this stuff with words, rather than with physical proof12:22
nmz787like all this was done ~10 years ago http://en.wikipedia.org/wiki/Water_memory#Subsequent_research12:23
nmz787and yet i'm finding homeopathy referenced in recent articles (which are pretty weird/farout articles in general)12:23
jrayhawkhomeopathy is a network of related observations and proposed mechanisms; a mechanistic study is not going to "disprove" the observational portions12:24
chris_99huh12:29
chris_99what observational portions12:31
jrayhawkhttp://scholar.google.com/scholar?q=homeopathy+meta-analysis12:36
jrayhawkthough i don't know specifically what portions klafka1 was attempting to invoke with his rather uncharitable leap12:37
chris_99i'm confused what you're trying to say jrayhawk, you don't think it can be disproved12:37
chris_99?12:37
@kanzure"water memory"?12:38
chris_99the idea that water remembers what chemicals it mixes with, utter BS12:38
-!- brownies [u1042@gateway/web/irccloud.com/x-bzjlpfmxuethwfhk] has quit [Read error: Operation timed out]12:43
jrayhawkWhile I do find it highly unlikely that a body of evidence as large as homeopathy, even if it is the product of bias, will ever be "disproven", that belief doesn't seem particularly relevant to the conversation at hand...?12:45
-!- ziyadb [u4806@gateway/web/irccloud.com/x-oqdnintbmvjdymhj] has quit [Ping timeout: 246 seconds]12:46
chris_99i don't know what is the conversation at hand12:47
chris_99i've just joined12:47
jrayhawkNah, you caught everything.12:47
@kanzure'disasterbationists'12:48
-!- mensch [~mensch@c-67-189-240-148.hsd1.ma.comcast.net] has joined ##hplusroadmap12:49
@kanzurehi mensch12:49
menschHi12:49
@kanzuremensch: are you from bosslab?12:49
menschNo12:50
menschBut I am in the Boston area...12:50
@kanzureah. might be worth checking out bosslab.org then12:50
menschYes, I think so, thanks for the link haha12:50
@kanzureoh god they updated their site. it used to be better.12:51
@kanzurenow it's some tumblr crap12:51
menschYeah, it looks pretty preppy12:51
@kanzurei swear just a week ago it was legit :(12:52
@kanzuremensch: http://web.archive.org/web/20110621191534/http://bosslab.org/12:53
menschOh, wow, that looked pretty decent.12:53
@kanzureyeah.. who the hell decided to go with tumblr instead of that?12:54
-!- _0bitcount [~ulises11@81.61.209.167.dyn.user.ono.com] has quit [Quit: Leaving]12:54
-!- brownies [u1042@gateway/web/irccloud.com/x-hwrcgynudgffagiw] has joined ##hplusroadmap12:57
-!- ziyadb [u4806@gateway/web/irccloud.com/x-hsdwhdhugljjlglj] has joined ##hplusroadmap12:59
-!- augur [~augur@208.58.5.87] has joined ##hplusroadmap13:03
doclhttp://lesswrong.com/lw/8f4/neil_degrasse_tyson_on_cryonics/6l8r13:03
@kanzureplease describe your links when they have awful urls13:05
doclme doing a data dump on the cryoprotectant toxicity issue.13:05
@kanzurepookie isn't smart enough to figure out when and when not to do that :(13:05
@kanzurei see13:05
@kanzuredocl: how experienced are you with vitrification? i mean, have you done tissue samples?13:05
doclnot personally. this is all second-hand.13:05
doclI know chana de wolf personally, she does it pretty often. I've watched her perfuse rats.13:06
@kanzurei met aschwin's brother-in-law at a bus stop in austin, texas once13:06
@kanzureit was pretty awkward13:06
doclheh, her family's fundamentalist from her descriptions.13:07
docloh wait, you said aschwin13:07
@kanzureyes, her husband's brother-in-law (i forget the exact relation)13:07
doclchana's brother then?13:07
@kanzurethat's one possibility13:08
doclaustin texas, sounds like it.13:08
doclheh, what was he like?13:08
@kanzuregangly, sorta proud that he had something topical to suggest13:09
-!- augur [~augur@208.58.5.87] has quit [Ping timeout: 245 seconds]13:09
doclhow did you find out he was aschwin's brother in law?13:10
@kanzureat the time, fenn was living with me and we would ride buses to places and be talking about random transhumanist projects13:11
delinquentmeactually thats a good point ... Im assuming that no one has cryoed a mouse and brought it back13:12
doclkanzure: so you had a high enough profile, and he was all 'hey my brother-in-law is a transhumanist'?13:12
@kanzuredelinquentme: there are various tissue/ice problems, some of which have been resolved by proper temperatuer curves13:12
delinquentmeis this in the vitrification process or the thawing?13:13
@kanzuredocl: something like that, he said, "oh, hey, i think my inlaw/brother does that ... yeah, aschwin de wolf"13:13
@kanzurein san francisco i would expect something like that, but not in austin13:13
-!- augur [~augur@208.58.5.87] has joined ##hplusroadmap13:15
docldelinquentme: both. if you vitrify (using high concentrations of CPA) that postpones the damage in a sense, as the worst of it (I believe) happens during the thawing phase.13:16
doclbasically the cryoprotectants are toxic, but that only matters if the tissue is warm and exposed to them for a long enough time.13:18
doclalso it matters if the concentration is high. lower concentration means more time is safe.13:18
doclice-blockers such as antifreeze proteins or certain polymers can prevent freezing with lower concentrations of cryoprotectant13:19
doclthe trouble is these do not penetrate the cells well13:19
doclyou might be able to work around by making the cell produce an antifreeze protein or perhaps a sugar like trehalose13:20
doclTardigrades can survive LN2 immersion because they produce trehalose inside their cells.13:20
doclhttp://en.wikipedia.org/wiki/Tardigrade13:21
chris_99isn't glycerol one of the chemicals they use in cryogenics13:22
@kanzureJuul: did you get around to doing the antifreeze protein project?13:22
klafka1hey are parameters coming into classes in python pass by value or reference?13:25
@kanzureklafka1: reference13:25
@kanzureklafka1: from copy import copy, deepcopy13:25
klafka1gotchya13:30
klafka1hey also if you have a variable without a self inside a class method, that's just a variable scoped to the method right?13:30
klafka1but if you have self. it's a class instance variable right?13:30
@kanzurecorrect13:31
klafka1ok cool13:32
chris_99are there any "must read" books on transhumanism13:33
@kanzurechris_99: no, they are all terrible13:33
@kanzurein fact, you should *not* read them13:33
chris_99heh13:33
klafka1HAHAH13:34
@kanzureeven that one 'diy biohacking' book is questionable13:35
chris_99which one?13:36
@kanzurehttp://www.amazon.com/Biopunk-Scientists-Hack-Software-Life/dp/161723002213:36
@kanzureoops i mean13:36
@kanzurehttp://diyhpl.us/~bryan/papers2/diybio/biopunk.pdf13:36
chris_99ive read that13:36
@kanzure'the singularity is near' is the standard staple book that everyone recommends, but it's not particularly useful13:37
chris_99i've read most of that too13:37
@kanzure'biology is technology' is the one that people recommend if they enjoy rob carlson13:37
@kanzurebut you can probably just get the same content out of his blog13:38
doclchris_99: yes, glycerol is one of the cryoprotectants they use13:38
doclterminology nitpick: cryonics (or cryobiology), not cryogenics13:39
@kanzureterminology nitpick accepted13:39
chris_99aha. i find it difficult to imagine that the glycerol or whatever13:39
chris_99could permeate the entire brain13:39
doclthe circulatory system is used.13:39
doclthe brain is fairly well vascularized, as organs go13:40
doclbut it does take time to permeate. especially if you want to prevent osmotic shock.13:40
chris_99hmm, but each cell needs to absorb it right?13:40
doclyes. but these are small molecules that penetrate very well.13:40
doclDMSO, glycerol, ethyline glycol13:41
chris_99has there been any sucessful cases of cryobiology with mammals13:41
@kanzurethere has been some tissue experiments, and an old cat/rabbit brain13:41
doclwith tissue samples, sure... not whole mammals, not at cryonics temperatures at least.13:42
chris_99aha13:42
doclmammals have been brought to below zero centigrade and brought back though.13:42
doclpart of the problem is getting the cryoprotectant out again without giving it time to have toxic effects on cells. that is a part that might go away with advanced nanotech (along with certain others).13:43
chris_99oh i didn't realise you had to extract it again13:44
chris_99is glycerol toxic?13:44
doclyeah, they all are in the concentrations needed to prevent ice formation.13:44
doclhowever they interfere with each other's toxicity to some extent, so mixtures are better than any one of them13:45
chris_99interesting13:45
doclhttp://en.wikipedia.org/wiki/Cryoprotectant13:46
-!- jmil [~jmil@2607:f470:8:3148:a939:3abe:a05d:7ca4] has quit [Quit: jmil]13:53
nmz787I started the conversation on homeopathy through crazy fringe/pseudo/too-complex-to-be-proven papers I stumbled across13:57
Mokbortolan_I use a homeopathic remedy to successfully treat the symptoms of pompholyx13:57
Mokbortolan_do I doubt the "science"? Yes.  Do I care now it works? No.13:58
Mokbortolan_it's probably placebo, but I don't care, it works13:58
Mokbortolan_and is cheap13:58
Mokbortolan_Would I trust the health of a seriously ill child to homeopathy? no14:00
docltrouble with placebo is there's hardly any room for improvement... I mean, what are you gonna do, make it more convincing?14:01
-!- strages_home [~strages@adsl-98-81-19-3.hsv.bellsouth.net] has joined ##hplusroadmap14:09
-!- eudoxia [~eudoxia@r190-135-13-88.dialup.adsl.anteldata.net.uy] has joined ##hplusroadmap14:10
doclI'm trying to think where the low-hanging fruit is for cryo research... maybe cultured neurons could be induced to produce trehalose or antifreeze proteins, thereby reducing cryoprotectant requirements.14:14
Mokbortolan_docl: yeah, but that doesn't mean you can't use them14:16
nmz787why not Mokbortolan_?14:17
Mokbortolan_what?14:21
Mokbortolan_why not what?14:22
Mokbortolan_why doesn't that mean you can't use them?  Why does (not) that mean that you can (not) use them... why does that mean you can use them.... because they work in some cases?14:22
nmz787why cant you use them?14:29
@kanzuredocl: antifreeze proteins would be worth studying, yes14:29
@kanzuredocl: some of the equipment could be simplified14:29
delinquentmedocl, is there use for frozen body parts?14:29
-!- nmz787_ [~androirc@72-59-182-23.pools.spcsdns.net] has joined ##hplusroadmap14:30
delinquentmecertainly hearts but I dont think you've got that working yet14:30
delinquentmesooo what about arterial valves?14:30
delinquentmemaybe those dont decompose14:30
-!- nmz787 [~Nathan@cpe-67-242-177-23.rochester.res.rr.com] has quit [Quit: Leaving.]14:30
delinquentmeso something more complex ... umm eyes?14:30
@kanzuredelinquentme: um.. what are you talking about?14:30
delinquentmecorrect me if im wrong but thats just a sweet spot issue14:30
doclkidneys maybe14:30
delinquentmekanzure, what to cryo thats 'low hanging fruit'14:30
@kanzuredelinquentme: organs aren't low-hanging fruit14:31
delinquentmedocl, i think kidneys are pretty complex no?14:31
delinquentme*nods*14:31
@kanzure"is there a use for frozen body parts?" what kinda question is that14:31
delinquentmekanzure, you talk too much14:31
@kanzurelike, are you asking if anyone has done it before?14:31
docldelinquentme: I'm trying to think of what experiments can be done on a shoestring to improve the state of the art14:31
@kanzuredocl: antifreeze protein stuff can be done for <$10k14:31
delinquentmedocl, well plant cells are cheap as hell14:31
-!- splicer [~ubuntu@c83-255-190-140.bredband.comhem.se] has quit [Ping timeout: 244 seconds]14:32
delinquentmeand kanzure it was meant as rhetorical14:32
@kanzureno it wasn't14:32
delinquentmekanzure, now you're being retarded14:33
delinquentmei said it. how would I not have the authority to say whether its rhetorical or not?14:33
@kanzure"is there use for frozen body parts?" how is that rhetorical14:33
delinquentmebecause it obviously leads to the conclusion of YES14:33
delinquentmethere is14:33
doclwell, neurons are the most important-to-cryonics.14:33
@kanzurewhy the hell ask it then?14:33
delinquentme*stupidity abounds today*14:33
delinquentmekanzure, why does anyone ask a rhetorical question?14:34
-!- delinquentme was kicked from ##hplusroadmap by kanzure [delinquentme]14:34
* kanzure feels better14:34
-!- delinquentme [~asdfasdf@c-24-3-85-154.hsd1.pa.comcast.net] has joined ##hplusroadmap14:34
docl:)14:34
delinquentmenice14:34
delinquentmekanzure, listen man is that how you're going to run the channel14:34
delinquentmenot funny not cute14:34
delinquentmenot a joke14:34
delinquentmedont be a prick14:34
@kanzurei will be as big of a prick as i want to be14:35
delinquentmedont be14:35
delinquentmebecause acting smart gets you nowhere14:35
@kanzurelook, do you have any relevant cryonics experience or are you just talking out of your ass14:35
delinquentmeesp when you're just trying to fucking nitpick14:35
delinquentmekanzure,  i was talking to docl  on what the low hanging fruits are14:35
delinquentmenow if you had read the thread you'd have known that14:35
@kanzureorgans aren't low-hanging fruit14:35
delinquentmeinstead you just want to fire off shit14:36
delinquentmeagain14:36
delinquentmerhetorical question14:36
doclyeah organs aren't low-hanging fruit. they are a possible down-the-line product.14:36
delinquentmedocl, so yeah the question is just which of these things are sufficiently simple14:36
delinquentmethat you can apply it14:37
@kanzuredelinquentme: you are banned from asking rhetorical questions for the time being, i might reconsider later14:37
delinquentmeso like noses you can freeze and have good luck .. but IDK if there is a market for noses14:37
@kanzure(you might find it an interesting challenge even)14:37
delinquentmekanzure, fuck you14:37
@kanzuredocl: whatdduya think about ken hayworth's brainpreservationprize stuff14:37
@kanzurei haven't heard from him in a while14:37
@kanzureoops i mean his http://brainpreservation.org/ stuff14:38
@kanzurethe la biohacking group was doing some neural tissue cultures, but they don't have any cryoprotectant results yet14:38
doclhmm... I am not so sure about the connectome hypothesis. talking to kalla724 on lesswrong makes me think there are solvents you'd be losing that might encode important info14:38
@kanzurewhat do you consider to be the connectome hypothesis? that things are connected?14:39
doclso you would probably need cryo, not chemical fixation.14:39
doclyeah14:39
eudoxiathat the connectome is all that one has to preserve for cryonics to succeed?14:39
doclwell, that the connections are the main thing14:39
@kanzurei think it's pretty well proven that neurons are connected and that synpases are real14:39
@kanzureah14:39
@kanzuredocl: are you familiar with 3scan.com?14:40
doclno14:40
@kanzurethey are doing destructive scanning of microtome slices14:40
doclinteresting14:40
@kanzurewell, they are also making microtome slices and catching the connectivity as they cut14:40
@kanzurethen they do image analysis to reconstruct the individual neurons14:40
@kanzuredocl: i was talking with them recently, and they might be using http://github.com/kanzure/netmorph soon to generate sample slices14:41
@kanzureand then run it through their image processing code14:41
@kanzureto confirm that they can extract the exact networks14:42
@kanzuredocl: does kalla724 have a specific list of things that he'd want to keep? "solvents" is p. vague, any cell will have some ph balance from random crap floating around14:43
doclhaven't seen anything specific yet :(14:44
doclhttp://lesswrong.com/lw/8f4/neil_degrasse_tyson_on_cryonics/6l0k14:45
doclIn general, uploading a C. elegans, i.e. creating an abstract artificial worm? Entirely doable. Will probably be done in not-too-distant future.14:45
doclUploading a particular C. elegans, so that the simulation reflects learning and experiences of that particular animal? Orders of magnitude more difficult. Might be possible, if we have really good technology and are looking at the living animal.14:45
doclUploading a frozen C. elegans, using current technology? Again, you might be able to create an abstract worm, with all the instinctive behaviors, and maybe a few particularly strong learned ones. But any fine detail is irretrievably lost. You lose the specific "personality" of the specific worm you are trying to upload.14:45
@kanzuresomeone has already done a c. elegans upload project14:46
@kanzurevery disappointing that nobody remembers it14:46
doclI get the idea we're in deeply hypothetical realms here still14:46
eudoxiawasn't the nematode upload done in 199714:46
@kanzureeudoxia: ancient news by now :(14:46
eudoxiamaybe it was a species-generic thing but I suppose it counts14:46
@kanzureeudoxia: to be fair, it wasn't a microdialysis upload, maybe that's why people choose not to remember it14:47
@kanzureeudoxia: also, that was before NEURON existed (i think?), so maybe they still have the data and would be willing to release it14:48
@kanzureactually, why the hell don't i have a backup of all their data14:48
eudoxiaI backed up the electron micrographs but haven't found a connectivity map or whatever it's called14:48
@kanzuredocl: "A collaboration led by Eugene Leitl. Its aim is to achieve the 3D reconstruction and functional emulation of individual specimens of C.elegans from scanned images of the vitrified original."i14:49
@kanzurehttp://web.archive.org/web/20070814044636/minduploading.org/research/data.nematodeupload.html14:49
@kanzureeudoxia: you have all of those?14:49
eudoxiaexcept the ones that are corrupt: PAG726L, 746, 745, 755, 760, 766 and 76714:50
doclcool, Eugene Leitl is on cryonet14:50
@kanzuredocl: he's also in here occassionally ;) he runs 'transhumantech', a mailing list he spams with somewhat-better-than-terrible transhumanist news clippings14:52
@kanzureeudoxia: can you email me explaining the situation? i want to loop in a few people who can help14:52
@kanzureeudoxia: i mean, with respect to the integrity of the files14:52
@kanzurealso, do you have a web host that can store those files? or would you like a hosting account from me to place that data temporarily?14:53
eudoxiaI have most of my dropbox free, and these are ~820 MB, I can upload them14:53
@kanzureok lemme know the link when it's done, and we can loop in eugen leitl and the others14:54
eudoxiaas for the integrity, I'm not sure: Image viewers tell me they can't recognize the format14:54
@kanzureprobably eugen/3scan/randal/some other people we can blame14:54
@kanzureoh, i'll check them then..14:54
eudoxiaI guess it could be just corrupt header data14:55
-!- yashgaroth [~f@cpe-66-27-117-179.san.res.rr.com] has joined ##hplusroadmap14:56
@kanzureare your files from internet archive? if so i can probably grab those real quick14:56
eudoxiayeah14:56
@kanzureyashgaroth: vitrification!14:56
yashgarothoh boy14:56
@kanzure"2012-05-14 14:57:46 ERROR 502: Bad Gateway."14:57
@kanzurefirst one that works is PAG722L.png :(14:58
eudoxiathe whole ABC group is gone14:58
eudoxiawhat do ABC and PAG mean?14:58
@kanzure13.9 MB/sec14:59
@kanzureok i got it15:01
@kanzurehttp://diyhpl.us/~bryan/papers2/neuro/nematodeuploadproject15:02
-!- splicer [~ubuntu@c83-255-190-140.bredband.comhem.se] has joined ##hplusroadmap15:05
eudoxiai thought about writing a neurite tracer with that data but then I remembered I don't know wha parts of the images are what :)15:06
@kanzurethe reason the internet archive doesn't have A.jpg is because it's 1nm/pixel15:09
chevbirdany biochem nuts in here?15:12
Mokbortolan_hah15:13
Mokbortolan_probably better to ask who isn't...15:13
Mokbortolan_smaller list15:13
yashgarothwhat sort of biochem15:13
chevbirdtransposase15:14
chevbirdspecifically how it dissociates after done cleaving15:14
yashgarothoh good, I thought you meant like krebs cycle biochem15:14
Mokbortolan_probably just a text saying "I'll call you.."15:14
doclwow, eugen just burst my bubble on whether things can be nanorepaired in a vacuum15:14
doclhttp://iubio.bio.indiana.edu:7131/bionet/mm/neur-sci/1996-August/025042.html15:14
doclVitrified15:15
docltissue does not take vacuum too well (sublimates), but nanocritters need15:15
doclvery hard vacuum to operate.15:15
eudoxiawell technically15:15
* docl was hoping vitrified tissue is fine in a vacuum15:15
eudoxiamechanosynthesis needs UHV, machines made out of mechanosynthesized diamond could work outside of UHV15:15
doclpoint15:15
yashgarothwell I'd imagine it depends on the specific transposase, but generally the final site wouldn't be recognized by the enzyme and it'd just fall off15:15
@kanzuremachines could have internal UHV chambers, and probably for much less energy than a giant UHV chamber15:16
@kanzuredocl: for mechanosynthesis.. http://github.com/kanzure/nanoengineer#readme15:16
chevbirdyashgaroth: tn5 and others, but in vitro ive been seeing that its pretty hard to "knock off" of the dna15:17
doclso maybe the vitrified tissue could be kept out of UHV whereas the parts of the micron-range nanoagents are kept under UHV?15:17
yashgarotheven if you heat it or add a detergent or something?15:17
chevbirdand i cant find much info in the patent15:18
yashgarothyou don't need to know how it works to patent it :/15:18
chevbirdwell, heating is a no go, right? cause there's an overhang that gets left between the mozaic end and your dna15:19
chevbirdso you dont want to play too close to t5015:19
chevbirdthe detergent, maybe15:19
yashgarothor high salt or something15:19
yashgaroththen again a lot of that will lower the Tm anyway15:19
chevbirdthe salt may or may not work (i suspect it does but nothing for sure yet)15:20
chevbirdim more interested in the why15:20
chevbirdrather than guessing15:20
chevbirdand i cant find much material15:20
yashgarothhmm well let me take a look around15:20
chevbirdand very true.  im almost sure the patent was filed because "oh shit this might be useful if someone understands it"15:21
yashgarothgenerally one expects transposases to be slow by default15:21
chevbirdsure15:21
yashgarothheh most gene patents are just "haha I sequenced it screw you give me money for the next 20+ years"15:21
docleudoxia: I wonder how high of a probability I should be giving to diamond mechanosynthesis not needing UHV.15:23
eudoxiadocl: it could work on noble gases (herp derp) and for some reason I seem to remember someone saying it could work on water15:23
chevbirdim really trying to avoid reading a paper (laziness), but i think its unavoidable15:25
yashgarothhell it might just sit there until a polymerase knocks it off15:25
chevbirdperhaps15:26
chevbirdi know it's not Pol I though15:26
chevbirdcause ive tried that15:26
yashgarothwait do you mean cleavage as in when it excises the transposon, or after insertion into a target strand?15:29
chevbirdso youve got some dsDNA and your Tnp, it goes in, associates, cleaves and then just sits there15:30
yashgarothmaybe it's looking for a suitable integration site15:31
chevbirdthe active site is pretty unspecific if thats what youre getting at15:32
yashgarothah okay then...you could also try gel separation, and why does it matter too much if the strands melt? they should figure out how to reassociate15:33
nmz787_Chevbird is this something you're doing?15:34
chevbirdwell i'm looking to preserve unique molecules and i'm not sure i want to introduce more error than i can get away wirh15:34
chevbirdby pol or otherwise15:35
yashgarothyou're afraid it'll start polymerizing if you melt the strands?15:35
chevbirdim going to have to pol and phosporylate later anyway to fill in the gaps, so id rather just fill in the small nicks then go the entire stretch of the molecule15:36
chevbirdim not afraid of it happening right then, but if things become mostly ssdna then i'm not looking too good for downstream applications15:38
nmz787_What are you asking? It will dissociate because of a confrontational change15:38
yashgarothanything below a few thousand basepairs should re-anneal no problem15:38
nmz787_Or after a enzyme-substrate intermediate bond is cleaved15:39
chevbirdnmz787_ thats not what i've been seeing.  mind you this is not wildtype tnp15:40
chevbirdyashgaroth yea i'm going to be about 10kb15:40
yashgaroththat should anneal fine, unless you've got a bunch of gDNA sitting around in the reaction15:41
nmz787_I'm just not sure what your question is.15:41
chevbirdyash: hopefully not but not sure.  would be interesting to qc and find out15:42
yashgarothmaybe try adding EDTA? though I don't know if the metal ions are relevant to the DNA binding per se or just the cleavage15:42
@kanzurenmz787_: started with how transposase dissociates from dna15:42
nmz787_Right but thats all i saw about it15:45
nmz787_Chevbird didnt say they were doing experiments, just studying.... what the goal is15:46
chevbirdhere's the idea http://www.google.com/patents/US20100120098?printsec=abstract#v=onepage&q&f=false15:47
chevbirdif you look at figure 2 it magically dissociates with a  black arrow15:48
chevbirdim all out of black arrows15:48
chevbirdso idk15:48
-!- Mariu [Jimmy98@89.41.57.33] has quit [Quit: leaving]15:48
yashgarothTransposome™ pfft15:48
chevbirdhaha15:48
chevbirdi do like the edta idea15:50
nmz787_Hows this better than sonication then adapter ligation?15:53
chevbirdtime15:53
nmz787_Or using a covaris g-tube15:53
chevbirdtime15:53
chevbirdnot really a gtube fan15:54
yashgarothso the downstream application is sequencing?15:55
chevbirdbut "better" depends on who you are and how many samples you're running, how good you analysis is blah blah blah15:55
chevbirdhttp://www.genomeweb.com/sequencing/transposase-library-prep-method-promises-easy-automation-less-dna-input15:56
nmz787_Does it mention a restriction site in the transposon? It could be a re fused to the trabsposase15:56
chevbirdi dont believe so15:57
chevbirdby restriction site you meannnnnnn a non-random target?15:57
nmz787_Yeah, if the removed peripheralbindin domains and fused it to the transpoaase to localize it binding domain15:58
nmz787_Shit15:58
nmz787_Thats outta order15:58
@kanzurei think nmz787_ is on a mobile phone15:59
chevbirdim thinking rotary phone15:59
nmz787_If they removed the REs peripheral binding domain(s), relyin on transposase for localization to RE site15:59
chevbirdlooking for an animation, found this instead.  win  http://www.youtube.com/watch?v=Nv74Ks1Nhlo&feature=player_embedded16:02
chevbirdanyway, thanks for the chat, i find it interesting16:16
yashgarothit's an intriguing problem...also maybe a pH change, but high salt is probably your best bet16:21
chevbirdshifting gears...16:28
chevbirdim planning on joining up with the bosslab guys this weekend to help out16:29
chevbirdshould be interesting16:29
chevbirddare i say. fun16:29
@kanzuremensch: you should go with him16:30
-!- chris_99 [~chris@unaffiliated/chris-99/x-3062929] has quit [Read error: Operation timed out]16:32
-!- eudoxia [~eudoxia@r190-135-13-88.dialup.adsl.anteldata.net.uy] has quit [Read error: Connection reset by peer]16:33
-!- chris_99 [~chris@unaffiliated/chris-99/x-3062929] has joined ##hplusroadmap16:35
nmz787_Chevbird fig 2 looks like the transposon got cleaved, doest look like insertion16:37
nmz787_Looks like fig 1 is the insertion diagram16:37
chevbirdit does stay on16:37
chevbirdi guess you have to trust me on that16:38
chevbirdhaha16:38
nmz787_Stay on?16:38
nmz787_Transposon is DNA right?16:38
nmz787_Transposase is the enzyme16:38
chevbirdthe "transposome" stays on16:38
nmz787_??16:38
chevbirdthe complex16:38
chevbirdyea16:38
nmz787_So fig 1 is insertion of transposon by transposone?16:39
chevbirdcorrect16:39
nmz787_then magically non-classical transpoaon behaviour happens?16:39
chevbirdand 2 is no insertion, just putting on mozaic ends16:39
nmz787_Mozaic ends?16:39
nmz787_Dunno what they are16:39
chevbirdwell the repeat sequences.  different people say different things16:40
nmz787_I tjought transposons were just cut-paste genes with flanking adapters on the end to facilitate the cut anf paste16:40
chevbirdyes16:41
chevbirdand this is a modified one16:41
chevbirdwhere the adapter is a modified sequence16:42
chevbirdbasically, so you can throw tags on it later16:42
nmz787_Not classical transposase behavior cracked16:42
nmz787_Korekt16:42
nmz787_Android voice recognition fail16:43
chevbirdso you're just talking to me16:43
chevbirdi assume on a bus or train or somewhere where people are staring at you16:44
nmz787_Driving alone in car16:44
chevbirdwhat app is this?  i think i may need it16:45
@kanzurehahaah ##hplusroadmap Learing how to use irc with ever decreasing amounts of responsibility16:45
@kanzures/Learing/Learning16:46
chevbirdindeed16:46
nmz787_Androirc from google play store16:51
-!- nmz787_ [~androirc@72-59-182-23.pools.spcsdns.net] has quit [Ping timeout: 272 seconds]16:57
chevbirdlooks like he's home16:57
@kanzureping timeout just means he's out of signal range17:01
chevbirddrats17:02
-!- nmz787 [~Nathan@cpe-67-242-177-23.rochester.res.rr.com] has joined ##hplusroadmap17:08
docloh, looks like they selected a project for the longecity cryoprotectant fundraiser17:13
doclhttp://www.longecity.org/forum/page/index.html/_/science/projects/cryopreservation-fundraiser-r3617:13
doclthey will be focusing on endothelial cells to see what neutralizes CPA toxicity17:15
docla good idea since endothelial cells are part of the perfusion impairment problem and apparently inexpensive.17:16
-!- chris_99 [~chris@unaffiliated/chris-99/x-3062929] has quit [Quit: Leaving]17:21
delinquentmeperfusion impairment problem?17:24
delinquentmedocl,17:25
delinquentme^17:25
yashgarothI'm guessing they mean that since all the cryopreservants have to pass through the endothelial to reach all the other cells17:25
yashgarothheh "Graduate student (six months): $6,000"17:27
@kanzureaww yeah minimum wage17:29
@kanzurewell, below minimum wage17:29
delinquentmeQuora gets $50 mil from Thiel17:32
delinquentmehttp://online.wsj.com/article/SB10001424052702303505504577404510443769988.html?mod=wsj_nview_latest17:32
yashgarothgrad students would kill to make minimum wage17:32
delinquentmevalued at $400 million =]17:32
delinquentmeyashgaroth, thats why that system needs banged up17:32
delinquentmeyou know why they make such shit cash? because their PIs and tenure17:33
yashgarothand because there's hordes of bio grad students17:33
delinquentmeand the whole idea that you're guaranteed one of these positions if you're a student17:33
docljust found a podcast about the de wolfs research as well: http://www.longecity.org/media/LongeCityPodcast_DeWolf2012_A01.mp317:33
delinquentmeyarp17:33
doclyashgaroth: yeah. perfusion impairment is pretty bad in real world scenarios. especially if there's any kind of delay.17:34
-!- chevbird [~chevbird@209-6-62-26.c3-0.sbo-ubr1.sbo.ma.cable.rcn.com] has quit [Quit: Leaving]17:36
@kanzurehttps://upverter.com/tkousar/356d3c3c43d1739c/Stepper-Motor-Driver/18:26
@kanzurehttps://upverter.com/tkousar/0000000000006070/A-DIY-breathalyzer/18:26
@kanzureman their urls suck18:26
@kanzurehttps://upverter.com/tkousar/0000000000006067/A-device-that-detects-magnetic-fields-and-poles-and-makes-a-different-sounds-depending-on-the-magnetic-field/18:27
@kanzurehttps://upverter.com/tkousar/3e6527eacd1c1e69/Digital-Oscilloscope/18:27
-!- Thorbinator is now known as Insert_Name_Here18:32
@kanzurehrmm.. http://resources.upverter.com/how-to-add-a-github-repository-to-your-projec18:33
-!- chillyvanilly [~chillyvan@207.178.197.130] has quit [Read error: Connection reset by peer]18:50
@kanzureyashgaroth: you might appreciate this.. "short list of what's actually required" http://88proof.com/synthetic_biology/blog/archives/17419:12
@kanzurehowever, i think much of that could be compressed into a bootcamp19:12
@kanzurelike "0.5 semesters of engineering design — usually done as “introduction to engineering” classes at theoretical universities these days" is really just 5 hours of how to draw isometric boxes and produce standard engineering documents19:13
yashgarothhaha math is listed19:13
yashgaroth"significant work can be outsourced" doesn't seem to jive with the DIY approach19:14
-!- _Sketch_ [~Sketch@71-91-221-175.dhcp.stls.mo.charter.com] has quit [Read error: Connection reset by peer]19:14
-!- _Sketch_ [~Sketch@71-91-221-175.dhcp.stls.mo.charter.com] has joined ##hplusroadmap19:14
yashgarothtwo semesters of general bio and one of micro seems a little...small, esp. without biochem19:15
yashgaroth99% of ochem and physics is also worthless19:16
Burninatekanzure: Drafting was combined with parametric 3D CAD and a model-building course at my CC19:19
yashgarothoh well at least they can show it to the vast majority of people on the DIYbio list who have no fucking clue what they're doing19:19
@kanzureBurninate: i've been doing some coding on parametric CAD if you want to talk about that sometime19:25
@kanzurealso, it's hilarious to see mac in the comments trying to recruit jonathan cline to the diybio group: http://88proof.com/synthetic_biology/blog/archives/52/comment-page-1#comment-819:26
@kanzure(jonathan cline was already a core diybio member)19:26
Burninatenah, it was years ago, with Pro/E19:26
Burninatewhat project have you been coding for19:26
@kanzurelolcad. http://diyhpl.us/cgit/lolcad19:26
@kanzurealso nanoengineer: http://github.com/kanzure/nanoengineer#readme19:26
yashgarothhey mac is too busy doing...whatever it is he does, to know things like whether jcline is in diybio19:27
@kanzuremac was doing uh.. cofactor bio, then snp-party, then genelaser, then19:28
@kanzurewell, now he's on to something else19:28
yashgarothuh huh19:29
@kanzureseems to be doing this http://diybioftw.com/19:30
nmz787yashgaroth: i think ochem was damn useful19:30
yashgarothI naturally despite anyone who's said "FTW" in the past 10 years19:30
yashgarothdespise*19:30
@kanzurewtf.. http://diybioftw.com/post/19671614110/structured-protocols19:30
@kanzurewhy didn't he share that with the diybio group?19:30
yashgarothit sort of was, but then again I'm not planning to do any chemical synthesis19:30
@kanzureso instead of emailing that link out, it takes me three months to somehow end up at his random blog to see his reply?19:31
nmz787thats not very recent either19:32
yashgarothI will admit ochem lab was a lot of fun19:32
-!- chevbird [~chevbird@209-6-62-26.c3-0.sbo-ubr1.sbo.ma.cable.rcn.com] has joined ##hplusroadmap19:34
-!- chevbird [~chevbird@209-6-62-26.c3-0.sbo-ubr1.sbo.ma.cable.rcn.com] has quit [Client Quit]19:36
klafka1ochem lab was a lot of fun19:55
-!- klafka [~klafka@c-24-6-19-91.hsd1.ca.comcast.net] has joined ##hplusroadmap20:02
-!- klafka1 [~klafka@c-24-6-19-91.hsd1.ca.comcast.net] has quit [Ping timeout: 260 seconds]20:05
-!- delinquentme [~asdfasdf@c-24-3-85-154.hsd1.pa.comcast.net] has quit [Quit: Leaving]20:11
-!- ThomasEgi [~thomas@panda3d/ThomasEgi] has quit [Remote host closed the connection]20:21
-!- joshcryer [~g@unaffiliated/joshcryer] has joined ##hplusroadmap20:23
@kanzurehttp://code.google.com/p/openworm/wiki/CElegansNeuroML20:27
@kanzure"Even the C. elegans connectome is missing a complete account of its ion channels, something that some groups are trying to address"20:27
@kanzurenice.. models of single neurons: http://senselab.med.yale.edu/modeldb/ModelList.asp?id=353720:27
@kanzurethat's a pretty long list20:28
klafkadid you see the back and forth on the connectome in that one video?20:29
-!- Insert_Name_Here is now known as Thorbinator20:33
@kanzureklafka: no?20:37
-!- n_bentha [~lolicon@75.111.75.178] has joined ##hplusroadmap20:42
nmz787kanzure: chandni is having a 2nd interview w/SF company20:45
@kanzureneat20:46
nmz787so if you signed a lease, does moving out there make synthesis work easier?20:46
@kanzurenot really, it makes it slightly more annoying to move out of austin20:47
-!- Cat4D [4335d082@gateway/web/freenode/ip.67.53.208.130] has joined ##hplusroadmap21:09
-!- nate_ [~nate@c-76-115-136-13.hsd1.or.comcast.net] has joined ##hplusroadmap21:43
@kanzurehi nate_21:49
-!- n_bentha [~lolicon@75.111.75.178] has left ##hplusroadmap []21:56
Cat4Di need a 200kw gunn diode transistor or heterooptical driver22:00
Cat4Dan associated rectifier, and info on how to buffer/store the DC for pulse modulation22:01
-!- _0bitcount [~ulises11@81.61.209.167.dyn.user.ono.com] has joined ##hplusroadmap22:04
-!- Cat4D [4335d082@gateway/web/freenode/ip.67.53.208.130] has quit [Ping timeout: 245 seconds]22:14
-!- lichen|2 [~lichen@c-76-105-164-184.hsd1.or.comcast.net] has joined ##hplusroadmap22:16
@kanzureyashgaroth: ugh http://medicalxpress.com/news/2012-05-scientists-successfully-gene-therapy-aging-associated.html22:16
@kanzure"virally delivered telomerase extends lifespan of 1-year old mice by 24%"22:16
lichen|2does it say how much increase of cancer risk that induced?22:17
yashgarothlolol "This might be the only practical solution for an anti-ageing therapy"22:17
@kanzurei wonder what mouse line they were using22:19
-!- lichen [~lichen@c-76-105-164-184.hsd1.or.comcast.net] has quit [Ping timeout: 240 seconds]22:19
-!- lichen|2 is now known as lichen22:19
* yashgaroth tries to find the article22:20
yashgarothehh doesn't matter what mouse strain they use, they're all just as inbred22:21
-!- _0bitcount [~ulises11@81.61.209.167.dyn.user.ono.com] has left ##hplusroadmap ["Leaving"]22:24
yashgarothwell they didn't waste any time before patenting it22:28
yashgarothI don't think they'd be able to measure an increased risk of cancer, since mice don't get it as often as humans and telomerase might not even be a limiting factor for it22:31
yashgarothalso I hate reading patents but using GFP as the control seems biased since GFP is toxic22:32
-!- jennicide [jen@173-18-211-34.client.mchsi.com] has quit [Read error: Connection reset by peer]22:53
-!- jennicide [jen@173-18-211-34.client.mchsi.com] has joined ##hplusroadmap22:53
-!- sylph_mako [~mako@118-93-18-64.dsl.dyn.ihug.co.nz] has joined ##hplusroadmap22:58
nmz787kanzure: know this guy? http://www.matzkefamily.net/doug/papers/quantum/Mensa2008BiologicalQuantum.pdf23:00
-!- splicer [~ubuntu@c83-255-190-140.bredband.comhem.se] has quit [Ping timeout: 252 seconds]23:01
nmz787"Brain could be folded 3D antenna"23:03
nmz787"Evolutionary advantage if bio-quantum link"23:03
yashgarothum23:03
-!- splicer [~ubuntu@c83-255-190-140.bredband.comhem.se] has joined ##hplusroadmap23:04
Mokbortolan_that's why you wear the tinfoil hat23:04
Mokbortolan_not to shield your brain from the government, that's clearly ridiculous23:05
yashgaroththis stuff is almost colander hat level23:05
Mokbortolan_it's to serve as a waveguide for the folded 3d bio-quantum antenna that is your brain23:05
Mokbortolan_and then, by focusing your innate N-Rays, you can have powers untold23:06
Mokbortolan_i'm sure it's in the bible somewhere23:10
Mokbortolan_methuselah or something23:10
-!- lichen [~lichen@c-76-105-164-184.hsd1.or.comcast.net] has quit [Read error: Connection reset by peer]23:26
-!- lichen [~lichen@c-76-105-164-184.hsd1.or.comcast.net] has joined ##hplusroadmap23:26
-!- strangewarp [~strangewa@c-76-25-200-47.hsd1.co.comcast.net] has quit [Read error: Connection reset by peer]23:27
-!- joshcryer [~g@unaffiliated/joshcryer] has quit [Ping timeout: 272 seconds]23:29
-!- strangewarp [~strangewa@c-76-25-200-47.hsd1.co.comcast.net] has joined ##hplusroadmap23:29
-!- nmz787 [~Nathan@cpe-67-242-177-23.rochester.res.rr.com] has quit [Quit: Leaving.]23:49
-!- joshcryer [~g@unaffiliated/joshcryer] has joined ##hplusroadmap23:53
-!- _Sketch_ [~Sketch@71-91-221-175.dhcp.stls.mo.charter.com] has quit [Read error: Connection reset by peer]23:53
-!- _Sketch_ [~Sketch@71-91-221-175.dhcp.stls.mo.charter.com] has joined ##hplusroadmap23:53
--- Log closed Tue May 15 00:00:10 2012

Generated by irclog2html.py 2.15.0.dev0 by Marius Gedminas - find it at mg.pov.lt!