2012-06-12.log

--- Log opened Tue Jun 12 00:00:38 2012
archelsfenn: haha, wonderful.00:18
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@kanzurediy biojihad08:26
Mariu=]08:33
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@kanzureklafka: why aren't you here?08:45
@kanzurewalnut creek marriot.. floor b208:45
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delinquentmehttp://www.sciencedirect.com/science/article/pii/0168165693901235?via=ihub09:01
delinquentmekanzure, what did you do09:01
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gnusha_diyhpluswiki.git: f19d4c4 intro from nathan head09:18
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gnusha_diyhpluswiki.git: ce7d6fa jojack talk09:43
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@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/intro.txt09:46
@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/joseph-jackson.txt09:46
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@kanzureJuul: HI10:04
Juulkanzure, :)10:04
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nmz787_10X!!!!!! Whooooo!10:15
TukotihNo way, you guys have a website?10:18
TukotihLol, have you written that Wiki yourself? In PHP?10:19
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delinquentmenmz787_, 10x?10:24
nmz787_Someone said 10x reduction in dna synth using pooled arrays10:25
nmz787_In price*10:25
delinquentmewhat is a pooled array?10:28
nmz787_Take a microarray and dissolve all the oligos then ligate...  IMO it isnt the way to go10:33
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delinquentme"Home made electroporation apparatus" http://www.google.com/url?sa=t&rct=j&q=&esrc=s&source=web&cd=8&sqi=2&ved=0CKIBEBYwBw&url=http%3A%2F%2Fwww.biosci.missouri.edu%2Fsmithgp%2FPhageDisplayWebsite%2Felectroporator.doc&ei=fIDXT-HqMKT46QHzv5C7Aw&usg=AFQjCNHbV0PgscqGzxtmFzMMFcfigiF7hw10:47
Lukasthanks10:48
Juuldelinquentme, cool10:48
delinquentme^10:48
delinquentmeis there like an exceedingly simple process to test out electroporation on yeast anyone knows of?10:53
delinquentmelike GFP yeast but with something cheaper / more readily available than GFP?10:53
Juula amp/kan resistance plasmid?10:56
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gnusha_diyhpluswiki.git: e467e52 security issues session10:56
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nmz787_Gfp is just as cheap as amp/kan plasmid10:57
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Juulkanzure, i fixed some typos but don't have push access :-/11:06
Juulwhat is the easiest way for me to send you fixes?11:09
Juulwho's the guy talking right now?11:11
Juuloh Nathan11:12
Juul:)11:12
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gnusha_diyhpluswiki.git: ad00740 security issues question session11:32
@kanzurejuul: github i guess. also you can hand me your public key and i can add you for git pushin'.11:34
@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/security-issues-session.txt11:36
@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/meg-flanagan-department-of-state.txt11:36
@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/piers-millett.txt11:36
@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/todd-kuiken-woodrow-wilson.txt11:36
@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/chris-anderson-syncberc.txt11:36
@kanzureTukotih: it's a git wiki11:37
@kanzurenmz787_: yeh i'm surprised chris was pimping dna microarrays. how lame.11:37
archelsDid you type those up live?11:37
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@kanzurearchels: yes11:44
archelsnice :D11:45
gnusha_diyhpluswiki.git: a45b5c2 where to send receipts11:45
nmz787_Kanzure maybe the rreceipts stuff shouldnt be online11:46
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@kanzurebeep boop13:12
Jorabeeeeep!13:12
Tukotihis gnusha_ a bot?13:19
TukotihJust curious13:20
@kanzureTukotih: yes13:22
chris_99anyone used sqlalchemy before?13:23
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menschchris_99: yes13:48
chris_99mensch, do you mind having a quick look at some code13:48
menschsure13:49
chris_99cheers i'll just pastebin it13:49
menschno worries13:49
chris_99mind if i pm you13:50
menschThat's okay13:51
gnusha_diyhpluswiki.git: d40c4fa first part of the innovation block13:53
strangewarpI'd just like to note that I despise consent-reality fundamentalists13:58
strangewarpyou argue objectivity, and they're all "hup ho, but objectivity is just what we all agree on!" no it fucking isn't13:58
gnusha_diyhpluswiki.git: 0502798 mac's talk thing13:59
_Sketch_strangewarp: amen14:04
_Sketch_I once had someone arguing on how you could have synesthesia if you believed hard enough.14:05
_Sketch_I failed to impress upon them that that isn't how synesthesia works.14:06
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gnusha_diyhpluswiki.git: 706bf17 chicago talk14:08
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gnusha_diyhpluswiki.git: 4e78480 biocurious14:48
gnusha_diyhpluswiki.git: 5aebc8f ellen jorgensen / genspace14:48
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gnusha_diyhpluswiki.git: 416c696 derek jacoby14:58
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@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/carlo-quinonez.txt15:03
@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/chicago-open-science.txt15:03
@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/derek-jacoby.txt15:03
@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/kristina-hathaway-biocurious.txt15:03
@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/ellen-jorgensen-genspace.txt15:03
@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/mac-cowell.txt15:03
@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/nancy-burgess-dtra.txt15:03
@kanzurechris_99: yes i've used sqlalchemy. also try quick_orm or something.15:04
TukotihWhat are those for?15:04
Tukotih"Object Relational Mappers"15:05
TukotihLike, social networking, and?15:05
@kanzure_Sketch_: one of the things lots of us in ##hplusroadmap want is a way to induce synthesia (and the shroom stuff doesn't entirely count)15:05
@kanzureTukotih: hahah no. definitely not.15:05
chris_99managed to get it working pretty well now :)  was a bit of a learning curve after JPA15:05
@kanzureTukotih: ORM is for writing software15:06
@kanzurethings like datamapper, activerecord, sqlalchemy15:06
Tukotihkanzure: I'm a newbie to dbs, only know a bit of SQL.15:06
TukotihHuh15:06
TukotihI need to check it out15:06
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@kanzureyou use ORMs instead of writing queries directly15:06
TukotihAaaaah15:06
@kanzuremost of the usual queries that you use in a typical web app or project are easily optimized by these libraries15:07
chris_99it makes creating the db a lot easier imo15:07
TukotihCool15:07
@kanzurein extreme situations (like maybe you're fucking facebook) you need to write optimized queries by hand, but the chances are very high that you sir are not facebook15:07
TukotihAre they compatible with GAE?15:07
@kanzureyes people use orms on gae15:07
TukotihNot that I'm going to use it, was just the first one I really learned.15:08
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nmz787_Im a bit bored15:18
gnusha_diyhpluswiki.git: 9d84dfb avery at bosslab15:21
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gnusha_diyhpluswiki.git: 74329d3 madlab/uk15:38
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gnusha_diyhpluswiki.git: 5fe10e3 pieter van boheemen15:50
gnusha_diyhpluswiki.git: 948dd77 oops, missed some questions15:50
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gnusha_diyhpluswiki.git: e8aca96 la paillasse16:14
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gnusha_diyhpluswiki.git: 93ab0f4 genoblasts in baltimore16:28
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gnusha_diyhpluswiki.git: af64938 denisa kera talk16:40
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gnusha_diyhpluswiki.git: f55b55e chido talk16:50
-!- mode/##hplusroadmap [-b *!*Omega@started.the.rvlution.net] by kanzure16:54
@kanzureoh wait16:54
@kanzureyeah, -b. ok.16:55
gnusha_diyhpluswiki.git: 45bfb8e natural-fiber.com i think16:59
@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/avery-louie-bosslab.txt17:03
@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/denisa-kera.txt17:03
@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/genoblasts.txt17:03
@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/madlab.txt17:03
@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/micronation-natural-fiber.txt17:03
@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/pieter-van-boheemen.txt17:03
@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/radka-chido-haneckova.txt17:03
@kanzurehttp://diyhpl.us/wiki/transcripts/fbi-diybio-2012/thomas-landrain-la-paillasse.txt17:03
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@kanzurefenn: would it be a terrible tragedy if i showed up one day early to langton?17:08
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@kanzurehi SilenceFromMars17:19
ParahSailinwhyd you guys talk to the fbi17:20
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nmz787_Fbi put on a workshop for free, so we told them whats up17:23
nmz787_Also i like being part of the relationship that should help keep bio labs safe from meth lab related scares17:24
ParahSailindidnt you learn in civics class to never talk to cops or volunteer information to leos in any way?17:25
ParahSailinhttp://www.youtube.com/watch?v=6wXkI4t7nuc17:28
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SilenceFromMarsthis guy is Saul Goodman in real life17:38
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@kanzureParahSailin: no i missed that class19:58
@kanzureeh .. http://diybio.org/2012/06/12/hardware-add-a-project/20:06
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@kanzurealso: apparently charles babbage wasn't the machinist who made his machine20:31
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gnusha_diyhpluswiki.git: 9a7dfef fixes from john griessen20:34
gnusha_diyhpluswiki.git: c52f5ab more fixes from john griessen20:34
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klafka1i am having such issues getting hadoop running20:35
klafka1anyone use it?20:35
@kanzurehrmm, i haven't specifically used that yet :(20:36
@kanzurealso why haven't you showed up yet20:36
klafka1where am i showing up to?20:37
klafka1sorry20:37
klafka1i've been so out of it20:37
klafka1are you in california now?20:37
@kanzuresf20:37
@kanzureyes20:37
@kanzurediybio/fbi thing20:37
klafka1is that this weekend?20:37
@kanzuretomorrow. 8am-8pm ish.20:37
klafka1tomorrow20:37
@kanzureno this weekend is a different thing that you should go to20:37
klafka1where ?20:37
@kanzurehttp://startupscience.eventbrite.com/20:37
@kanzuretomorrow's thing is at the walnut creek marriott20:37
@kanzuremariott20:38
sylph_makoI hear Babbage poured funding into precise machining as a prerequisite project. England became a world leader in precise machinery, but the difference engine was never made.20:38
klafka1umm20:38
klafka1there is no way i can get there by 8pm if it's in walnut creek20:38
@kanzuresylph_mako: i thougth the difference engine /was/ made20:38
klafka1my job is being ridiculous atm20:38
sylph_makoNot in a useful way.20:39
klafka1i'm ardently searching for a new one20:39
@kanzureklafka1: well, the 8am session wont start until 830 am probably20:39
sylph_makoWas it?20:39
sylph_makoLike did anyone ever actually use one?20:39
@kanzurenot sure. i'm very confused about this.20:39
@kanzureso like, the guy he hired, did all the screw standards?20:39
@kanzurefenn: you would probably know this?20:39
sylph_makoI don't know the details, I'm not even sure how strong the causal link between his investment into fine machinery and england's capacity for it is.20:40
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--- Log closed Wed Jun 13 00:00:39 2012

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