2013-07-05.log

--- Log opened Fri Jul 05 00:00:16 2013
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heathneat00:27
heathhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC1361254/00:27
heath.title00:27
yoleauxULTRASOUND INCREASES THE RATE OF BACTERIAL CELL GROWTH00:27
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heathhttps://www.sciencedirect.com/science/article/pii/S0074769606530025?np=y01:13
heathpaperbot: https://www.sciencedirect.com/science/article/pii/S0074769606530025?np=y01:13
paperbotno translator available, raw dump: http://diyhpl.us/~bryan/papers2/paperbot/Bacterial%20Cell%20Division%3A%20The%20Mechanism%20and%20Its%20Precison.txt01:13
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kanzure.title http://emploi.epfl.ch/page-94325-en.html07:48
yoleauxPost-Doctoral Fellow | EPFL07:49
kanzure"The Blue Brain Project has modelling infrastructure for constructing in silico neocortical columns containing about 30,000 neurons, distributing the cells through the column and forming synapses. Several such columns have already been assembled into a planar hexagonal mosaic containing up to 1,000,000 neurons. However, axons grow long distances along tracts within the brain's white matter, and the next stage of development is to populate ...07:49
kanzure... three-dimensional mesh models of brain regions with appropriately-shaped mesocircuits, adjusting their dimensions and shape to match rodent brain anatomy, and connecting the circuits according to known large-scale connectomics data,  yielding a complete rat brain model containing on the order of tens of millions of neurons."07:49
gradstudentbotI hope they kick me out.07:52
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delinquentmedoes anyone know if we've got a reliable way to maintain human cells in homeostasis outside the body?08:28
kanzureno, but you can culture them08:29
kanzurealso you can freeze them08:29
delinquentmein #chemistry chatting about this08:32
delinquentmeand #biology says we do it often08:32
kanzurethey are lying to you. they don't know what homeostasis means.08:32
delinquentmeyeah they're kinda derping i think08:34
delinquentmeso right now we can culture / grow them08:34
delinquentmeand then they'll eventually die08:34
delinquentmeso if you wanted to culture a human organ outside the body ... and maintain it08:34
kanzurenot if you believe in the hela lines08:34
delinquentmeoh ahah well yeah those aren't normally functioning08:34
delinquentmeBUT I wonder .... those would be an interesting line to do testing for controlling cancer mechanisms08:35
delinquentme( i'm sure this is being done )08:35
kanzurehuh?08:35
delinquentmesoo hela cells will multiply08:35
delinquentmeput simply08:35
gradstudentbotWho used the last of the buffer?08:35
delinquentmesooo if you get hela cells ... and you're interested in working on the mechanics of what would revert cells into a "normal behavior" state08:36
delinquentmethose cell lines would be good to work with08:36
delinquentmeI was just reading about this small molecule and blah blah "old drug"  not patentable08:37
delinquentmeso nobodys working on it08:37
kanzurethat's not true, you can usually patent any small molecule as long as you add an extra inert group or some shit08:37
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delinquentmehttp://www.rexresearch.com/diclacet/dca.htm08:40
delinquentmeEnter DCA, which has been used for years to treat people with mitochondrial disease. The drug boosts the ability of mitochondria to generate energy. When given to cancer cells it did the same: the cells switched from glycolysis to mitochondrial energy production. What's more, functional mitochondria help cells recognise functional abnormalities and trigger cell death.08:40
ParahSail1nive been trying to conduct unscientific trials of dca for a while08:45
ParahSail1nwhenever a friend's dog gets cancer, i try to push the stuff08:45
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kanzuredamn, why all the doggy cancer?08:47
delinquentmeParahSai1in, why do we no just make hela cells and mix wif dca08:49
ParahSail1nlike 100% of dogs that survive their own stupidity die of cancer08:50
ParahSail1npaperbot, http://ar.iiarjournals.org/cgi/pmidlookup?view=long&pmid=2003240708:51
paperbotno translator available, raw dump: http://diyhpl.us/~bryan/papers2/paperbot/In%20Vitro%20Effects%20of%20Dichloroacetate%20and%20CO2%20on%20Hypoxic%20HeLa%20Cells.pdf08:51
ParahSail1nlol EtBr scare on the diybio list08:58
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delinquentmeParahSai1in, thats awesome.09:08
ParahSail1nmethylene blue really sucks as a gel dye09:08
ParahSail1nyou can hardly see the band at all09:08
ParahSail1nmethylene blue is not going to be any easy to obtain than etbr09:09
kanzurei don't know what i was expecting. i was hoping to get data off of my phone to transfer it to another phone. but if the usb connection is broken, how would it get any power?09:13
kanzurei guess i should just buy a few more batteries09:13
ParahSail1npaperbot, http://www.sciencedirect.com/science/article/pii/000326978790419209:14
paperbotno translator available, raw dump: http://diyhpl.us/~bryan/papers2/paperbot/Ethidium%20bromide%3A%20Destruction%20and%20decontamination%20of%20solutions%20.txt09:14
kanzurehrmm09:14
kanzureseriously though. scihub plugin for paperbot.09:15
kanzurethese failures are unacceptable.09:15
ParahSail1ni would have worked on that yesterday, but sci-hub seems to be blocking me09:15
kanzuredid you email them?09:16
ParahSail1nno09:16
kanzurek09:17
chris_99is sci-hub working again, i kept getting a donation page09:17
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ParahSail1nyeah thats what you get when you connect from us ip09:18
ParahSail1nif you connect through open russian proxy you get a banned message09:18
chris_99haha09:18
kanzureParahSail1n: fyi there are certain proxies that forward yor ip address09:19
kanzureParahSail1n: you can usually check via http://httpbin.org/get or http://requestb.in/09:19
chris_99hmm atm i see 'The fundraising target was reached.Thanks to everyone for supporting the Open Access cause!'09:20
kanzureugh this isn't open access09:20
chris_99indeed09:21
gradstudentbotOkay, someone really needs to do the lab dishes.09:23
ParahSail1n46.229.136.224 3128 works09:24
ParahSail1nseems that paper was already on libgen http://libgen.org/scimag1/10.1016/0003-2697%252887%252990419-2.pdf09:24
chris_99it lets you fetch papers through it?09:24
ParahSail1nyes set that proxy and you can use sci-hub09:25
kanzurehow do they check if a paper was already on library genesis?09:25
chris_99cool i'll give it a shot09:25
ParahSail1nkanzure, some backend detail involving doi lookup i imagine09:25
kanzureParahSail1n: let's just find a vps i can pay for09:25
chris_99'The proxy server is refusing connections' odd09:26
kanzureimport requests; proxies = {"http": "46.229.136.22409:27
kanzureoops09:27
kanzureimport requests; proxies = {"http": "46.229.136.224"}; response = requests.get("http://sci-hub.org/", proxies=proxies);09:27
chris_99hmm with nc i get 'nc: unable to connect to address 46.229.136.224, service 3128' probabaly my stupid phone network09:28
ParahSail1nin contrast to dogs, female goats generally die of oldness or childbirth, but rarely cancer09:29
kanzurewhat about feral dogs?09:29
ParahSail1ni imagine those would die of physical trauma most of the time09:30
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ParahSail1nunless you mean the goats, and yeah that would be a main cause of death for them09:31
ParahSail1ni wasnt including trauma for the goats09:31
kanzurehead trauma :309:31
gradstudentbotHey, does anyone have an extra undergrad?09:32
kanzureParahSail1n: so, the problem with all these proxies is that paperbot would have to cycle through proxy ip addresses, and fetch new proxy lists. which is annoying.09:32
kanzurei don't want to have to manually feed proxy ip addresses each day09:32
ParahSail1nif they like you at sci-hub.org, ask them to greenlight that pdx machine09:33
ParahSail1nyeah its insane09:42
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jonathan___""  "Life expectancy has been increasing in the past in countries doing well by 2.5 years per decade, three months per year, which is really quite remarkable - six hours per day," according to Professor James Vaupel, director of the Max Planck Institute for Demographic Research in Germany, who's been tracking it.  ... "The last couple of years on that graph, there is a possible slowdown," says Colin Mathers a senior scientist 10:29
jonathan___World Health Organization (WHO) says. ""10:29
jonathan___average life expectancy improvements http://news.bbcimg.co.uk/media/images/68489000/gif/_68489044_life_expectency_624.gif10:30
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@fennmethylene blue is commonly used to treat fungal infections in aquarium fish; any fish store will have it10:35
@fennwhat goes in sybr safe gold or whatever10:36
@fennjust look at msds and mix up your own10:36
ParahSail1nsybr safe dyes are super impossible to get other than from invitrogen10:38
@fennhm they don't even say what it is on the msds10:38
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ParahSail1nthere are patents describing what the fluorophore is10:38
ParahSail1nand i suppose you could have a russian custom synthesis place make you a batch10:38
ParahSail1nits a really exotic fluorophore10:39
@fennhow does it stick to DNA but isn't toxic?10:41
ParahSail1noh its toxic10:42
@fennis it just brighter?10:42
@fennso you can use less of it10:42
ParahSail1nbut invitrogen has funded enough papers where nothing could be claimed with a p value < .0510:42
gradstudentbotCoffee? Never tried it.10:43
@fenn"Coffee? Never tried it" - Things Architecture Students Don't Say10:45
kanzureParahSail1n: ok contact achieved. he was in my pidgin buddy list already.10:47
ParahSail1nnice10:48
ParahSail1nthen who was the stranger10:48
kanzure"we have 21 million paper"10:48
ParahSail1nhttps://www.google.com/patents/US825253010:49
kanzure"The traffic has to be > 23 papers each minute"10:49
kanzure"Now is lower"10:49
@fenni wonder if i've met stranger, the name sounds familiar at least10:49
kanzure"Yes, all unique"10:49
kanzurefenn: it was strangeland10:49
kanzurefenn: the person who during their10:49
@fenni don't remember that at all10:50
@fennlooks like an issue10:50
kanzureyes it was an issue10:50
kanzure"We are contacting you as we have received a report that your website http://sci-hub.org/donate/ is currently infringing upon the intellectual property of Nicholas Tardif, Elsevier, Inc, n.tardif@elsevier.com. Such infringement also violates PayPal’s Acceptable Use Policy."10:53
kanzurewait a sec.. i remember tardif. i was stalking him a while back.10:54
@fennwhy does the IP belong to this guy instead of elsevier proper?10:54
ParahSail1npick the target, freeze, personalize, and polarize it10:54
kanzurei bet that's just how paypal translates the message into russian10:54
ParahSail1ntardif sounds like as good a target as any10:54
kanzuree.g. i bet that message was originally sent through paypal's interface10:55
kanzureand then they have message templates for each language10:55
gradstudentbotI think I'll be done in 4 years.10:55
ParahSail1nmake it personally costly to represent criminal interests as an attorney10:56
kanzurewhy even bother using paypal, geeze10:58
@fennbecause how else do you wire money to strangeland10:59
kanzurebitcoins10:59
@fennyou have a point there10:59
kanzuredamn it, the day i have to teach the strangelands how to properly run shady operations is the day i have to eat my metaphorical hat.11:00
kanzurewhat happened to that legendary sense of paranoia11:00
@fennthe wall fell down11:01
kanzurethere's some literature from cypherpunks (various faqs) i guess11:04
@fennlibrarians seem to be clueless about fighting The Man for some reason11:04
kanzurebut nothing that elaborately explains the extreme sense of paranoia you should develop or employ11:04
@fennit's not paranoia if someone's out to get you11:04
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ParahSail1nso whats the deal, can he greenlight some ips?11:07
kanzuretrying to strike a deal11:08
delinquentmekanzure,11:13
delinquentmeyou wan me come cheel today?11:13
kanzureParahSail1n: the limit is 18 per 24 ours11:13
kanzure*hours11:13
delinquentmegimme dat sched11:13
delinquentmealso we could totally hit up john schloendorn to hang too11:13
delinquentmeOH and you missed aubreys BBQ11:13
ParahSail1nlol aubrey had a bbq?11:13
delinquentmeyeth11:14
delinquentmeor so i herd11:14
ParahSail1nthat wacky alcoholic11:14
ParahSail1nlimit of 18 papers per 24 hours...11:15
kanzureyeah i am trying to bump that up11:15
ParahSail1noffer to give him pdx as an alternate proxy11:17
delinquentmewhat?11:17
delinquentme18 papers per 24 hrs?11:17
ParahSail1ni know he has like 20 of them already11:17
kanzureokay 100/day11:19
kanzureoh brother. all of this is over just $1k in paypal. fuck that.11:19
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delinquentme???11:22
ParahSail1noh, paypal ripped him off, so he's punishing americans?11:22
delinquentmecan has metal party? https://www.youtube.com/watch?v=XGQotw9Hbbg11:22
kanzureno. paypal hasn't frozen the account yet.11:22
delinquentmeROOOAAR11:22
ParahSail1nbut is threatening to11:22
kanzure"investigating"11:22
delinquentme"sucking dick"11:22
delinquentmebahaha i make me laugh11:23
kanzure"You know, I asked for donations from Iranian researchers. Yes, though there was so much users from this country only 3 people could donate. even $1. I got a message they live for $80 / month."11:23
kanzurefenn: paranoia sounds derogatory. what's the right word?11:27
delinquentmeuMMMM11:27
delinquentmeeasiest way to get ahold of a human organ for research purposes?11:27
delinquentme(srsly)11:27
ParahSail1nuse pig11:35
ParahSail1nthe origin of the great apes was a hybridization event between the african forest hog and an old world monkey11:36
kanzureoh god it's all php11:39
kanzureabandon ship11:39
ParahSail1nphp is faster than python, what's the big deal?11:40
jonathan___faster?11:41
ParahSail1nputting everything in the same namespace reduces loc by avoiding the need for import statements11:41
delinquentmelawlz.11:41
ParahSail1nthe import statement in python is a known bottleneck11:41
delinquentmePrez.Help.Program11:41
jonathan___um so don't do that.11:42
ParahSail1nphp helpfully puts everything you'd ever need into a single namespace11:42
jonathan___python can dump into one binary right11:42
kanzureyes you can use py2exe or pyinstaller11:42
jonathan___then there is zero concern for file system speed in execution11:43
jonathan___"lets use a toy language because it is faster because it doesnt have any namespace"  oh okay11:43
ParahSail1nim talking for web apps jonathan___11:44
kanzurejonathan___: yeah, i think namespacing is probably my largest complaint about php at this point. second to the low level of training of most of its programmers.11:44
kanzurejonathan___: i think this is the best writeup about php, http://me.veekun.com/blog/2012/04/09/php-a-fractal-of-bad-design/11:45
jonathan___"web apps" means what.  oh server side right11:46
jonathan___isnt the real def of web app something that runs 100% in browser thru plugin or native, on client side only.   i.e. java11:46
kanzurewell, people mean javascript11:47
kanzurenot java11:47
jonathan___or html5 but still, client side11:47
kanzurejvm is usually living outside of your browser. so java is not really a web app.11:47
ParahSail1njavascript is a subset of java11:47
kanzurejavascript is not a subset of java11:47
kanzureholy hell wtf11:47
jonathan___what11:47
ParahSail1nok ill stop trolling11:47
jonathan___ok look I'm gonna leave now11:47
ParahSail1nthat was too outrageous11:47
jonathan___go troll me on the diybio list it looks popular right now ha11:48
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kanzureParahSail1n: site is being debugged. it's all php and there were no passwords before my request.11:49
ParahSail1npasswords for what?11:50
ParahSail1nim not sure if i want him to password the site11:50
kanzureit's complicated.. ip address authentication was a no, but now there's a cookie i can pass, except they are now changing all of the php to account for this.11:51
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ParahSail1nman, xml.dom.minidom and xml.etree.ElementTree dont seem very tolerant of in the wild html12:00
kanzurei suggest using pythonwebkit12:02
kanzurefight fire with fire12:02
kanzurealso there's webkitgtk+ which gives you gobject bindings thanks to the glorious gtk project12:02
ParahSail1nthis must be why phantomjs exists?12:02
kanzurephantomjs is somewhat related, but unfortunately you control it via javascript12:03
kanzurethe gtk gobject bindings to webkitgtk+ allow you to use the dom directly from any programming language that has gobject support (which is.. most of them).12:03
kanzureParahSail1n: here, have you a haskell for great power https://github.com/jblake/webrender/blob/master/src/WebRender.hs12:05
@fennwhy are you bothering with scihub again?12:05
ParahSail1nyeah im just gonna use tagsoup or some shit12:05
kanzurefenn: because they have access to many things that i do not12:05
@fenndon't you have like a million ezproxies?12:05
kanzurethose are just urls. not passwords.12:05
ParahSail1none great thing about sci-hub is that every pdf accessed through it goes onto libgen12:06
ParahSail1nso that you dont have to keep your cache on diyhpl.us where copyright trolls will send you dmca takedowns all the time12:06
@fennassuming you can get to libgen12:07
ParahSail1nlibgen is easier for me to get to than sci-hub12:07
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@fennwho would have access to all of ieee's publications?12:12
@fennseems like most universities only have bits and pieces12:12
kanzureieee would have access12:12
@fenni reckon MIT probably has most of them12:13
@fennmaybe KAUST or similar throw-money-at-it institutions12:14
@fenni shouldn't be worrying about this, i have too much to read already12:15
@fennwhere are all the militant librarians when you need them12:16
kanzurei think we're them12:16
@fennhttp://www.ala.org/Images/OIF/radicalbutton.jpg12:16
kanzureokay cookie is working12:17
kanzuresomeone should bug me until i implement it into paperbot12:20
kanzurethis is going to be the nuclear version of paperbot12:20
@fennheh there's even an anime with a "library defence force" http://en.wikipedia.org/wiki/Toshokan_Sens%C5%8D12:20
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kanzure"It is the most important responsibility of libraries to offer collected materials and library facilities to the people who have the Right to Know as one of their fundamental human rights. In order to fulfill their mission, libraries shall recognize the following matters as their proper duties, and shall put them into practice."12:21
kanzure"Libraries have freedom in collecting their materials.12:21
kanzureLibraries secure the freedom of offering their materials.12:21
kanzureLibraries guarantee the privacy of users.12:21
kanzureLibraries oppose any type of censorship categorically."12:21
kanzureoh so it's a utopia story12:22
@fennutopia? you mean because someone actually stood up for their ideals?12:23
@fennbtw that cookie hack was pretty quick12:25
kanzurei exert dark influence12:25
kanzurealso identity blackmail12:25
@fennlol12:25
@fennwe know where you live ... somewhere in central asia12:26
ParahSail1ni dont even understand what type 'unicode' shit is in python12:26
ParahSail1nisnt there already type 'str'12:26
kanzurejust use python 3 and forget about it12:26
@fennunicode is unicode, what's not to understand?12:27
ParahSail1nyou run paperbot on python 3?12:27
kanzureno, paperbot is not python 3. sorry about that. but there is no good reason for it to be python 2.12:28
kanzurea lot of paperbot needs to be rewritten12:28
kanzureiirc there's nothing about it that requires it to be python 2. so it should just work on python 3.12:28
@fennwhy do people still use python 2?12:29
kanzurebecause i am morally wrong12:29
ParahSail1nnumpy12:29
@fennoh, numpy is a good reason12:29
@fenn"NumPy and SciPy support the Python 2.x series, beginning with version 2.4, as well as Python 3.1 and newer"12:30
@fennhe biggest problem in practice is actually a semantic one: Python 3 doesn't let you play fast and loose with text encodings the way Python 2 does. This is both its greatest benefit over Python 2, but also the greatest barrier to porting: you have to fix your Unicode handling issues to get a port to work correctly (whereas in 2.x, a lot of that code silently produced incorrect data with non-ASCII12:32
@fenninputs, giving the impression of working, especially in environments where non-ASCII data is uncommon).12:32
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@fennthat doesn't seem like a good reason to me12:34
kanzuregood reason for what?12:34
@fennfor people to start new projects in python 2.x12:35
kanzurepeople start with python 2.x only if they have a dependency on a non-py3k-compatible library12:35
kanzuredjango was a blocker for a long time12:35
klafkado all the scientific computing things support python3k12:36
klafkathat's my main concern atm12:36
klafkawell it's my only concern about python really12:36
@fenn"all the things" is not very specific12:36
klafkayes i know12:37
kanzureopencv, numpy, scipy, scikit, what else?12:37
klafkapymc12:38
kanzuresympy?12:38
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klafkai'm assuming all of the continuum new libs are py3k compatible12:40
klafkai just got their iopro library12:40
klafkait is actually pretty awesome12:40
@fenni guess scikit still requires 2.7... i guess12:42
@fennopencv requires 2.712:43
kanzurei would have expected opencv to be ported already12:43
kanzureisn't it just some vague python bindings?12:43
@fennyeah it's probably just some swig crap12:44
nmz787_there are a few opencv python bindings12:44
nmz787_slash implementations12:44
kanzureany for py3k?12:44
@fennAlmost all of the source code of PyOpenCV is compatible with Python 3. Boost.Python and NumPy are now both compatible with Python 3. The only remaining show stopper is setuptools. There is an alternative package to setuptools called 'distribute' that is compatible with Python 3. I will try to see if we can replace setuptools with it and make PyOpenCV fully compatible with Python 3.12:45
nmz787_the latest official opencv python junk looked pretty good12:46
kanzuresetuptools is non-py3k? wtf.12:46
@fennhow the hell is setuptools still not ported12:46
nmz787_using sci/numpy arrays for images, seems smart12:46
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kanzurewhat about tesseract-ocr?12:50
ParahSail1nnumpy arrays are bytearrays so why not12:50
nmz787_damn, yash isn't here again12:51
nmz787_does he check logs for his name?12:51
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kanzuresometimes. he can definitely be guilted into doing that.12:52
nmz787_delinquentme: homeostasis can be preserved by lowering the temperature12:54
nmz787_delinquentme: it's called freezing, it's done to cells of all kinds, all the time12:54
kanzurei don't think freezing can be argued to be homeostasis12:54
delinquentmenmz787_, sure but thats also not good for the organ12:55
nmz787_kanzure: you can just plug a lab supply into your phone's battery port12:55
@fennit's called "cryostasis"12:55
nmz787_delinquentme: it can be fine12:55
delinquentmesure but its not like " bodily homeostasis "12:55
nmz787_http://www.thefreedictionary.com/homeo-12:55
delinquentmeits " slow all chemical processes down to buy more time "12:55
nmz787_'same'12:55
delinquentmenot " happy organ in comfortable place "12:55
delinquentme^ this is what we want12:56
nmz787_http://www.thefreedictionary.com/stasis12:56
nmz787_'same' 'balance'12:56
nmz787_so freezing counts12:56
nmz787_sure it will be fine12:56
delinquentmeok so to redirect12:56
delinquentmethe question12:56
nmz787_it won't know happiness or lack thereof12:56
delinquentmeI want room temperature maintanence12:56
nmz787_why?12:56
delinquentmewith normal body temp cellular process rates12:56
delinquentmebecause im interested in the chemical inputs and what needs to go in12:57
kanzureParahSail1n: are you doing paperbot things? just curious.12:57
delinquentmewhen its frozen its not performing normal organ function12:57
kanzureParahSail1n: or were you asking for other reasons12:57
nmz787_delinquentme: sure it is, just super slow12:58
@fenndelinquentme: there are some tissue culture techniques that use constant flow, and some "artificial organ" construction protocols that do perfusion of nutrient/buffer solution, that might be a good place to start12:58
nmz787_or almost paused12:58
nmz787_delinquentme: like i said, what's your goal?12:58
delinquentmenmz787_, so if I want the organ to cough out its normal functional products do I want it frozen?12:58
nmz787_you said homeostasis12:58
@fenni think we talked about this before and the magic word was perfusion12:59
delinquentmeso you want to educate me on the terms to use or help me?12:59
ParahSail1nyeah doing paperbot shit12:59
delinquentmefenn thats in reseeding the organ12:59
nmz787_well that's why i'm asking what the purpose is12:59
delinquentmeand sure also a bit of the giving it nutrients12:59
nmz787_if it's simply to study12:59
nmz787_well12:59
kanzureParahSail1n: okay. feel free to delete chunks of code that you hate. i did a really poor job on it.12:59
nmz787_you've got a few hundred person lifetimes of research to get there, likely12:59
@fenni dont know what "reseeding" is supposed to mean. are you talking about reusing pig collagen as a scaffold?13:00
nmz787_delinquentme: perfusion is a fancy pants word for getting oxygen to cells13:00
delinquentmefenn, reseeding is the post "perfusion decellularization" process where we put cells back into the ECM scaffold to make a new biocompatible organ13:00
@fenndelinquentme: http://en.wikipedia.org/wiki/Machine_perfusion13:01
nmz787_oh13:01
nmz787_sorry13:01
nmz787_http://www.thefreedictionary.com/perfusing13:01
nmz787_'To coat or permeate with liquid, color, or light; suffuse.'13:01
nmz787_liquid, not oxygen !13:01
@fennwill you stop using that awful website, sheesh13:01
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delinquentmefenn, nmz787_ so the idea is ... come up with a protocol which supports room temperature organ operation13:02
delinquentmethat protocol will be useful for two very high value operations13:02
delinquentme1) organ transplant13:02
nmz787_delinquentme: just get a dog and give it a lobotomy13:02
delinquentme2) development of organ on a chip microfluidics13:02
kanzurewhy room temperature? temperature is not the problem with organ perfusion.13:02
delinquentmeits all cellular opkeep13:02
kanzureyou don't need an organ on a chip. you just need a prosthetic that mimics the same features.13:02
kanzurehere is what you actually want to do13:02
delinquentmekanzure, room temp is the thing if we want to get the organ to do its invivo  "thing"13:03
kanzureyou want a machine that is capable of keeping a specific organ alive and operation13:03
kanzureyour body is not room temperature -_-13:03
delinquentmeIE " In body normal behavior "13:03
kanzureblah13:03
kanzure*operational13:03
nmz787_delinquentme: you might look into pig organ transplant research13:03
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delinquentmeoh well thats bc you aint cool13:03
nmz787_delinquentme: if you could get around rejection, it would be a machine for your organ upkeep13:04
delinquentmehttp://img266.imageshack.us/img266/5180/csicomment.png13:04
@fennahem so i'd like to point out that such machines exist and have been around since 198213:04
nmz787_transfer your donor heart into a carrier pig, drive the pig across the country, swap out of carrier pig13:04
delinquentmehttp://www.forbes.com/sites/singularity/2013/05/01/new-device-keeps-liver-alive-outside-body/13:04
kanzurestop reading news sites13:04
kanzuredidn't we ban you from reading news sites, delinquentme?13:04
delinquentmePerhaps its an FDA approval issue?13:04
delinquentmealso I want to try this with a human liver or something13:04
delinquentmeim wondering how hard that will be13:05
delinquentme" hard"  .. how hard . " hard " hahah13:05
delinquentmesorry13:05
nmz787_you will need to go outside this country13:05
nmz787_since you aren't an MD13:05
nmz787_no one will give you a half-decent human liver legally13:05
delinquentmeit doesnt need to be half decent13:06
delinquentmejust barely functional13:06
delinquentmebut I guess I can start w pig13:06
@fennstart with rabbit13:06
delinquentmefenn, do you know the names of these machines?13:06
@fenndude i just linked the wikipedia article on it13:06
delinquentmeand right now it looks like the machines just use "blood"13:06
delinquentmewhich is like13:07
gradstudentbotYou know, I can just do consulting.13:07
delinquentmenot scalable13:07
kanzureblood is scalable because it's working13:07
kanzurewhere do you think blood comes from? the ether?13:07
delinquentmebabies13:07
@fennthe blood federal reserve?13:08
delinquentmeI bet cat labs would be awesome places to get first  mechanical tests done13:08
kanzurefenn: not quite. bodies create blood.13:08
delinquentmeor are rabbit labs more ... common?13:08
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kanzureroot cause analysis, if you are concerned about blood then just make sure your system is capable of making blood13:09
@fenni'm so lost in this conversation13:09
kanzureme too13:09
kanzurefenn: he was saying that machine perfusion is impractical because it requires blood to keep organs alive (of course it does)13:09
kanzurefenn: so i was telling him "then make blood"13:10
@fennbut so what, you need the organs in the first place, wherever you got the organs you can also get blood13:10
kanzuretrue, but you can also do lab-grown blood if you bothered13:10
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kanzurei wonder why nobody has done that yet. don't you need some bones and a few nutrients?13:11
@fennalso i think blood is probably easier to acquire than liquid perfluoroalkanes13:11
kanzureis it? aren't we always in a perpetual human blood shortage?13:11
@fennwho said anything about human blood13:11
delinquentmefenn, so my end idea was to hookup a reseeded thymus and get it to start producing bio-compatible WBCs13:12
kanzuretoo much acronym13:12
delinquentmewhite blood cells13:12
delinquentmeT cells13:12
kanzurefenn: i don't recall non-human blood working in transfusions. counter evidence?13:12
kanzuredelinquentme: you should just say blood, then. that's what we're talking about.13:12
kanzuredelinquentme: you should also stop saying "reseeded"13:12
delinquentmekanzure, nah bc blood is marrow cells13:13
delinquentmethis is characterization of tcells13:13
delinquentmeBUT13:13
delinquentmeSENS calls for upgraded white blood cell machinery13:13
@fenndelinquentme: you know about SCID animals right?13:14
delinquentmesorry kanz ... but a donor thymus reseeded with a persons cells13:14
delinquentmewill be a phenomenal feedback look for augmenting white blood cells13:14
delinquentmeand is already financially viable ... as we need to maintain immune systems in aging individuals13:15
ParahSail1nim kinda surprised mate de coca is still allowed on amazon.com13:15
@fennhttp://en.wikipedia.org/wiki/Severe_combined_immunodeficiency_(non-human)13:15
delinquentmeso thymus + bioreactors ... keep that organ at body temp and producing / characterizing white blood cells ... and you've got something of value13:15
kanzureright now i am more interested in this claim of non-human blood transfusions being successful13:15
delinquentmewhich can be used as a research platform for engineering13:15
@fenner, skip the crap about dogs and horses in that article13:15
@fennactually that whole article sucks, nevermind13:16
@fennanyway, you can just buy a mouse or a rabbit that has no immune system, and transplant your thymus into it13:16
@fenni think this is what schloendorn is doing, but with progenitor cells instead of thymus13:17
@fennhe was talking about using it for aids and chemotherapy complications13:18
nmz787_isn't the thymus simply the hookah bar equivalent for WBCs?13:18
nmz787_like, the marrow makes them13:18
nmz787_they just meet up with B cells in the thymus13:18
@fennright13:18
delinquentmefenn, yeah i just sent him an email on this13:18
delinquentmethat was immune path13:18
nmz787_delinquentme: search terms: synthetic defined culture media13:19
nmz787_delinquentme: serum-free13:19
nmz787_delinquentme: bloodless media is more expensive13:19
kanzureif there non-human blood transfusion works, then you could practically provide an unlimited supply of blood to human organ perfusion machines13:20
kanzure*if the13:20
kanzure*if13:20
delinquentmeI guess I question if sticking this glad into a mouse would begin re-characterizing the thymus13:20
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nmz787_seriously we should all just move to thailand or somewhere, hard drives are cheap, and they wouldn't question us raising headless rabiits whose only jobs was to be milked of their sweet sweet purfuser13:20
nmz787_perfuser13:20
nmz787_perfusalatory fluid13:21
kanzurewhy does it need to be headless?13:21
delinquentmefor marketing13:21
nmz787_it won't need a brain13:21
nmz787_more efficient per lb13:21
gradstudentbotPaper submitted.13:21
delinquentmedont we do this in the midwest already?13:21
@fenn"i swear, i thought it was more ethical to chop your head off, don't get mad at me"13:21
delinquentmelolol13:21
nmz787_fenn: not chopped, never had13:21
kanzureseems more complicated to remove heads13:21
nmz787_nah13:21
delinquentmethan to grow bodies w/o?13:22
delinquentmeidk about that.13:22
nmz787_just clip those cells from the embryo13:22
delinquentmeyou're assuming thats not used in orientation13:22
delinquentmeand the spinal cord in development?13:22
delinquentmeno way13:22
delinquentmeanyways no reason to chop heads13:22
nmz787_there must be some brain-only protein that could be disrupted, either screwing head development, or screwing neural function13:22
@fennhow about we implant a chip into the brain and use it to fly cruise missiles or do NLP or traveling salesman problems or whatever13:22
nmz787_making the animals complete verifiable retards would seem to side-step ethical issues13:23
@fennwaste of a brain if you ask me13:23
nmz787_no need for spinal cord for blood prodcution13:23
delinquentmeHAHAHA13:23
delinquentme" your control systems are amazing "13:23
delinquentme" rabbit brains "13:23
delinquentme' yeap right there in the warhead '13:23
nmz787_i'm all for headless animal mutation research13:24
kanzurefenn: i demand references13:24
kanzurefenn: regarding blood13:24
nmz787_delinquentme: have you seen the head transplant news?13:24
delinquentmenmz787_, fucking love it13:24
@fennhttp://www.omnicorp.com/13:24
delinquentmeit feels like evangelion like a fucking anime13:24
kanzureyou are both banned from reading the news13:24
nmz787_delinquentme: perfect reason to raise headless retard humans13:24
nmz787_or at least retards13:24
kanzurethat wasn't news. that was one professor saying he wants to do it.13:24
nmz787_verified retards13:24
delinquentmenmz787_, im saying we have them enmass already13:24
kanzureso does everyone else, big deal. just because you want something isn't news.13:24
delinquentmego dig through kansas13:24
kanzurefenn: this does not look like blood evidence to me13:25
@fenncybernetic brain-in-a-vat defense drones13:25
delinquentme^13:25
delinquentmeImmortals13:25
delinquentmewe have them already13:25
delinquentmein SC213:25
delinquentmeone of my fav units13:25
@fennaww there's no content on that website13:26
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kanzurecory is way ahead of you on that. he has neural tissue cultures with microelectrode arrays iirc.13:26
kanzureanyway. blood refs?13:27
@fennblood refs what?13:27
kanzureyou keep claiming non-human blood can support human organs. i can't find any references on the interwebs about this.13:27
@fennanimal blood won't play nice with human blood because of Rh factor, why do you think it's called Rh factor13:27
kanzureif this has been tested and it works then why are we still doing blood donation drives? fuck all that shit.13:27
kanzure"In December 2003, a new haemoglobin-based oxygen therapeutic, PolyHeme, began field tests in a Phase III trial on emergency patients (in trauma settings) in the U.S. PolyHeme was the 15th experiment to be approved by the Food and Drug Administration since 1996. Patient consent is not necessary under the special category created by the FDA for these experiments. In late 2005, an independent panel verified, after the fourth and final review of ...13:29
kanzure... 500 trauma patients enrolled in this study by that date, that no statistical evidence of safety concerns had arisen so far in the study. This study concluded in mid-2006 with final enrollment of 720 patients. Wired news reported that the trial failed when 47 of the 350 people given PolyHeme died compared to 35 deaths out of 363 in the control group. Debate exists as to whether or not the difference in the mortality rate is attributable to ...13:29
kanzure... the small sample size. The fact that the experimental subjects did not give consent is a significant factor.[7]"13:29
kanzure"In 2010, Hard to Treat Diseases, Inc. (HTD) merged with an anonymous Canadian biotechnology company in hopes to enhance donated blood or hemoglobin based blood substitutes to have a shelf life of 42 days and higher levels of Nitric Oxide when packaged.[6]"13:29
kanzure"In 2013, IIT Madras was approved to mass-produce artificial blood.[8]"13:30
kanzuregreat, now does it work with tissue cultures or organs?13:30
@fennthis is dumb, first prove your product on animals before using it on humans, sheesh13:30
kanzurei see no indication that they did not do animal trials13:30
nmz787_kanzure: human cells can live with bovine serum13:31
kanzureParahSail1n: didn't you want to do some project to grow bovine serum without bovines?13:31
@fennanyway 13% dying vs 10% dying sounds like success to me13:31
kanzure"Recently, the scientific community has begun to explore the possibility of using stem cells as a means of producing an alternate source of transfusable blood. A study performed by Giarratana et al. describes a large-scale ex-vivo production of mature human blood cells using hematopoietic stem cells."13:32
ParahSail1nhuman serum without humans13:32
kanzurelarge-scale ex-vivo production. great.13:32
kanzureParahSail1n: well. we should do that.13:32
@fennbut my reading about polyheme suggests it's only for additional oxygenation during surgery, not as a full blood substitute13:32
kanzurefenn: ah got it13:32
ParahSail1nliver cell line makes human albumins13:32
kanzuremy point is that this is really helpful for maintaining organs with machines13:32
kanzureespecially if you do not need 1000s of bags of human blood trucked in from redcross13:33
@fennyes schloendorn has already done that, i saw it with my own eyes13:33
delinquentmekanzure, you're saying the psuedo blood13:33
delinquentme?13:33
kanzurefenn: done what?13:33
@fenn1 whole milliliter of mouse blood13:33
@fennusing stem cells13:33
kanzureyou saw him do what exactly?13:33
delinquentme^^^^13:34
@fennokay i took his word that he had derived it from stem cells, since it takes a couple days13:34
kanzurei see13:34
delinquentmeblood?13:34
delinquentmeits not the lipid O2 binding stuff13:34
kanzurebut why does it matter? 1 mL isn't enough to prove anything, especially since the mouse has 100 or 200 mL i think.13:34
* kanzure ponders total blood content of mouse13:35
* delinquentme googles total blood content of mouse13:35
@fennthe problem with stem cell blood production is the risk of teratoma, you have to carefully screen out any remaining stem cells13:35
@fenn.wa mouse blood volume13:36
yoleauxmice: maximum recorded blood mass (mass of blood as fraction of body mass): (4.6 to 7)%; Scientific name: Mus13:36
@fenn.wa mouse mass13:36
yoleauxmice: weight: (data not available); Scientific name: Mus13:36
nmz787_.wa w.c. fields death13:36
@fennwtf srsly13:36
yoleauxW. C. Fields: date of death: Wednesday, December 25, 1946; Date formats: 25 December 1946; Time difference from today (Friday, July 5, 2013): 66 years 6 months 11 days ago; 3471 weeks 2 days ago; 24299 days ago; 66.53 years ago; Time in 1946: 359th day; 52nd week; Observances for December 25, 1946 (United Kingdom): Christmas Day13:36
kanzurei think the other problem is that you will end up with market demands for tranfusable blood for humans. so it will end up too costly to produce for just your own organ experiments.13:36
@fennhow can wolfram not know the mass of a mouse13:36
delinquentmehttps://www.google.com/patents/WO2013068753A1?cl=en&dq=organox&hl=en&sa=X&ei=QRPXUYzfFob9iQKYt4CAAw&sqi=2&pjf=1&ved=0CEwQ6AEwAw13:37
nmz787_paperbot: http://pubs.acs.org/doi/abs/10.1021/bc050108%2B13:37
paperboterror: HTTP 500 http://diyhpl.us/~bryan/papers2/paperbot/A%20Novel%20Fluorescent%20Probe%3A%20Europium%20Complex%20Hybridized%20T7%20Phage.txt13:37
delinquentmefenn, correct13:37
@fennAn adult mouse has a circulating blood volume of about 1.5-2.5 ml (6-8% of the body weight)13:37
kanzureoh13:38
delinquentmeapparently its also substantially less complex to use similar cells and to coax into trans differentiation13:38
delinquentmeand NOT stem cells for that reason13:38
@fenncorrect13:39
nmz787_I love my pdf uploader bookmarklet!13:39
@fennprogenitor cells13:39
nmz787_it unfortunately fails for iframe pdfs13:39
nmz787_i still haven't found a way to grab the pdf from RAM13:40
nmz787_i guess adobe must be a web plugin13:40
@fenncan't you just look in the iframe for the pdf?13:40
nmz787_well but where /is/ the binary13:40
nmz787_?13:40
@fennit's <iframe src="foo.pdf"> right?13:40
kanzureyeah, just request the pdf url again13:40
nmz787_maybe, but that sucks for slow connections13:41
nmz787_or large pdfs13:41
kanzureor if you want the loaded version then you should use pdf.js instead of adobe pdf13:41
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nmz787_what is github.io?13:42
kanzuregithub has to host user content on another domain for security reasons13:43
kanzuretheir gh-pages feature used to work on github.com (giving you a subdomain) but then people pointed out that you can use this to exploit github users13:43
kanzureso they transitioned to github.io13:43
kanzurethis is the same idea behind googleusercontent.com13:43
nmz787_i still don't get it13:44
nmz787_isn't anything uploaded to github user content?13:44
kanzurenmz787_: http://homakov.blogspot.com/2013/03/hacking-github-with-webkit.html13:44
nmz787_so i don't have wireshark installed on windows, but this test page, when scrolled fast, shows 'waiting for github.io' in my status bar13:45
nmz787_http://mozilla.github.io/pdf.js/web/viewer.html13:45
nmz787_that seems weird13:45
kanzuregit repo contents on github.com does not run javascript in your browser. therefore they don't need to worry about it.13:45
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kanzuregithub used to make http://username.github.com/projectname/ when you push an orphan branch called 'gh-pages'. which would be served to a user as javascript. and then the javascript stuff executes in a user's browser.13:46
kanzurethis is problematic because you can exploit the browser to make the user do something nefarious13:46
kanzurelike add you as an admin to all of their github repos13:46
kanzurethis is what homakov did13:46
@fenni'm amazed the military hasn't come up with a synthetic blood substitute yet, with all the money they throw at research13:46
kanzurehe made a github.com page that made a github admin add him as an admin to github.com/github/github (github's source code)13:46
kanzureand then he told them how he did it, and they transitioned to github.io for gh-pages stuff13:47
nmz787_i never knew github had that13:47
nmz787_seems dumb13:47
kanzurethis exploit required a github admin to view his page, of course13:47
kanzurewell, that's how browsers work13:47
kanzuregithub has that so that sites can be hosted13:47
nmz787_why would you need javascript on a storage servr?13:47
kanzurehttp://phantomjs.org/ is running off of a gh-pages branch13:47
kanzurethey aren't specifically allowing javascript, they are allowing you to host a website with project content13:48
kanzureand naturally that includes files like html, js, etc..13:48
nmz787_but why?13:48
nmz787_let a web host host web pages13:48
nmz787_and github host git repos13:48
@fennamen13:48
kanzurebecause for static html sits, git is reasonably good13:49
kanzure*sites13:49
kanzurewhat do you think diyhpl.us is? hehe.13:49
@fennlet them eat static html13:49
nmz787_a web site?13:50
kanzureanyway, for a pdf.js demo, you need to be served pdf.js.js13:51
gradstudentbotThe culture got contaminated.13:51
kanzurefenn: yeah, i think the military's philosophy is something like, "We only put the finest materials into your body, including flaming bags of money."13:51
@fennthe military's philosophy is "if it ain't square, we don't want it"13:51
kanzurewhat's the cost per soldier anyway?13:52
@fennoh, out of control, in the millions13:52
@fenn$850M per year?13:53
kanzurei don't mean w.r.t defense budget13:53
@fennthat can't be right13:53
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@fennoops, $850k per year13:53
kanzureu.s. military cost per deployed soldier in afghanistan in 2012 was $1.2 million soldier/year13:54
kanzureokay i see13:54
@fennyeah something like that13:54
@fennthe numbers vary depending on who you ask13:54
nmz787_damn, i should have joined the MIL years ago13:55
gradstudentbotWell, I can't really talk about it because I'm trying to get it published in Science or Nature.13:55
@fennhah nmz787_ you don't get that money, that's the COST13:55
nmz787_including school loans, I've been living on like $30k/yr13:55
@fennthe pay is closer to $30k/year13:55
kanzureyeah i think you get paid 15-25k/year in the military unless you're up near the top13:56
@fennhowever if you're a civilian contractor doing the same job you get $250k/yr13:56
nmz787_fenn: yeah, but my pay has been way less than the $30k/yr that i've been costing13:56
nmz787_so if i cost 1.2mil, i'd expect you'd see some benefits13:56
@fennthen either a) reduce your costs, or b) increase your income13:56
nmz787_flyin in planes, shooting free ammo13:56
nmz787_night vision goggles13:56
kanzureuh, there are some very specific disadvantages (even if you live)13:57
@fennbenefits? is that some kind of code word?13:57
nmz787_ptsd13:57
kanzurei don't mean ptsd13:57
kanzureeven if you escape without ptsd there are still other problems like- you've probably killed people, got your friends killed, or many variations of that13:58
@fenna lot of what they're calling PTSD is just suddenly having nothing to do13:59
kanzurefenn: so, if artificial blood works for keeping organs alive, i think working on machines to keep organs alive is a valuable thing to be doing14:00
@fennit's like solitary confinement in prison14:00
kanzurefenn: you could even have an "organ bank" where you control the supply of livers or w/e14:00
@fennthere's no such thing as artificial blood14:00
@fennnot yet at least14:00
kanzurei mean, non-human-donation-based blood14:00
kanzurei'm really confused then, what were those blood replacements that i was reading about, then?14:00
@fennthere are oxygen perfusants like polyheme or hemopure14:01
delinquentmehemopurreeeee14:01
@fennthe experimental progenitor cell stuff, i dunno if it's been tested yet14:01
nmz787_paperbot: http://scripts.iucr.org/cgi-bin/paper?uk303014:02
paperbotno translator available, raw dump: http://diyhpl.us/~bryan/papers2/paperbot/b734138e8dc743f1660b89eaf5a7a9e7.txt14:02
nmz787_paperbot: http://journals.iucr.org/c/issues/2011/07/00/uk3030/uk3030.pdf14:03
paperbotno translator available, raw dump: http://diyhpl.us/~bryan/papers2/paperbot/5759d158dbcc62baf0d97638a820a7dd.txt14:03
kanzurenmz787_: wait until the scihub upgrade comes later today14:04
nmz787_that page asks for a password14:04
nmz787_very weird14:04
nmz787_like an ssl type popup box14:04
@fennin 2011 they cultured 10^10 red blood cells from embryonic stem cells, vs 10^12 in a standard unit of blood (450ml)14:09
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jonathan___"Vatican to make John Paul II a saint   ....  A Costa Rican woman reportedly recovered from a serious brain illness, and the Congregation concluded that the only explanation for her recovery was the fact that her family had prayed for the late pope's intercession.   ... John Paul's first miracle was the apparent curing of a 49-year-old French nun, Sister Marie Simon-Pierre Normand. She had been diagnosed with Parkinson's Disea14:12
jonathan___the same malady which afflicted the pope himself in his later years.  Sister Marie claims that she and her fellow nuns prayed for the intercession of John Paul after his death. Her sudden cure had no logical medical explanation and she later resumed her work as a maternity nurse, the Vatican says."14:12
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jonathan___is this 2013 or are we still in the dark ages?14:13
@fennobviously you haven't watched "stigmata"14:14
jonathan___is that tv?  I dont watch tv14:14
@fennit's a terrible movie about blood and stuff14:14
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jonathan___it is obviously human nature to be blatantly gullible.    everyone wants "to believe"14:15
@fennit's a well known cognitive bias14:15
jonathan___especially women - is that because women are statistically less likely to have science education?14:16
@fennthere is even a good theoretical explanation for it14:16
@fennwhy "especially women"14:16
nmz787_fenn: you solved the blood crisis14:17
jonathan___i dont know why, maybe since woman are more likely to be emotional decision makers14:17
nmz787_fenn: just get more stigmata!14:17
@fenn"Women may be more religious because they are more interested in being safe"14:18
jonathan___watch the video it is classic, the woman interviewed at the end http://www.bbc.co.uk/news/world-europe-2319831214:18
@fenndid i mention i hate psychology14:18
jonathan___I think I agree with that quote14:18
jonathan___talk to women about it you'll get the smack down.. "don't you want to believe???"  umm whatever14:19
@fennif god were good why didn't he intercede on behalf of john paul14:20
@fennsurely with all those prayers he would have heard one of them14:20
jonathan___hmm faulty argument, cant prove or disprove a nonexistent entity with a nonexistent action, eh14:21
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kanzuremaybe you just suck at finding the fun women, jonathan___14:21
jonathan___""it was his time, god has plans for us all"" would be the answer or a zillion other similar stories14:21
jonathan___bryan I agree14:21
kanzuregotta account for all the reasons you might be doing this to yourself14:21
jonathan___I need to find more of them14:21
@fenni didn't say anything about existence, just the goodness/relevance of prayer or believing14:22
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jonathan___I definitely need more help finding more data points.   LOL14:22
kanzurebleh wikipedia, "Scientists from the experimental arm of the Pentagon of United States began creating artificial blood to transport blood to remote areas and transfuse blood to wounded soldiers more quickly in 2010.[24] The blood is made from the hematopoietic stem cells removed from umbilical cord between the mother and fetus of humans after birth using a method called blood pharming. Pharming has been used in the past on animals and plants ...14:22
kanzure... to create medical substances in large quantities. Each cord can produce approximately 20 units of blood or three blood transfusions"14:22
jonathan___I remember syn bio 4.0 in HK  - ate lunch with this cutie - mentioned religion - wow, did she turn real cold real fast14:22
kanzure" The blood is being produced for the Defense Advanced Research Projects Agency by Arteriocyte. The Food and Drug Administration has examined and approved the safety of this blood from previously submitted O-negative blood. Using this particular artificial blood will reduce the costs per unit of blood from $5,000 to equal or less than $1,000.[24] This blood will also serve as a blood donor to all blood types. Pharmed blood may be used in ...14:23
kanzure... human trials in 2013."14:23
kanzurejonathan___: most people are really bad at discussing religion, and there's no reason to think that any girl (or guy) would find you to be a particular good conversationalist at that topic14:23
kanzure*particularly14:23
@fenni'd expect a religious biologist to be used to it14:23
kanzureor bored by it14:24
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jonathan___actually in that case she had very religious parents supposedly, and that conference had a lot of 'different' overtones to it, about creating life etc14:24
kanzurethere's this psychological effect that i can't remember the name of, where just talking about something can make a person dramatically more hostile to that concept, just for mentioning it14:24
jonathan___and, she believed in evolution so she got a lot of flack for it14:24
jonathan___umm association eh14:24
jonathan___anyways my errrmmm data so far indicates that science girls are not as much fun  LOL14:25
nmz787_jonathan___: so she got cold when you mentioned liking or disliking religion?14:25
jonathan___WELL OKAY14:25
@fenni think they are just hunted to extinction14:26
kanzuremaybe they are smarter than the scientists. "why would i go into a field with no pay and no benefits when i could just as well enjoy my job doing something else?"14:26
jonathan___I brought up the topic of whether 'creating life' was good or bad or conflicting with religion, and how science "may have been" held back significantly because of some religions, etc etc  not real dramatic conversation14:27
jonathan___i mean, not real emphatic conversation.   some might think it was dramatic, I dunno14:27
jonathan___to me it was water cooler talk14:27
nmz787_the weird thing is how religion bolstered shit like schools and printing books14:27
@fenndoes any religion even say anything about creating life? i mean there's not really any historical precedent14:27
kanzurefenn: children don't count?14:28
nmz787_but now it seems like we've superceded it's need14:28
@fennkanzure: no, they don't14:28
kanzurefenn: ha ha14:28
jonathan___dude it's the turtles on the backs of elephants man ..  oh wait or is it reversed.   ahh i'm going to hell now for sure.14:28
@fennchildren are not citizens under the law of God14:28
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kanzurewhy are we talking about this?14:28
nmz787_fenn: well the first line is something like, on the first day god created blah14:28
jonathan___umm neither are women eh?14:28
kanzureyou are all banned14:28
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jonathan___sb 4.0 had some rather interesting "new" presentations  on creating life etc.14:29
@kanzurewasn't that like 5 years ago14:29
@kanzurearen't they doing sb 7 this year?14:29
jonathan___so at that point everyone was very much "wow ooh ahh  wait this is kind of dangerous"14:29
@fennoh i guess there are some folk tales about golems14:29
jonathan___then sb 5.0 did not have that attitude at all, it seemed more like "yep see we did it, here it is, old hat, what's next?"14:30
jonathan___in fact a couple of the posters the presenters were hesitant to even say "yes we made a living thing out of basically nothing"  ie they made lipids artificially14:31
jonathan___even tho, it was relatively "old" research from 90s in some cases14:31
@kanzurelipid synthesis is not particularly new14:31
jonathan___exactly my point14:31
@kanzurewho started the sb conferences? was that also drew?14:31
@fenni always thought life was DNA replicating in cells14:31
jonathan___no!   life comes from the stork! delivering babies!   oh wait or is that a pelican. damn i'm burning in hell again14:32
@fennotherwise you have to say various computer programs or robot factories are alive14:32
jonathan___i think the sb confs were made by mit-ucb jointly14:33
@kanzurei never understood the fascination with definitions of life14:33
jonathan___turing test man14:33
@fennit's dumb, it's just as hard to define any other word, but nobody cares14:33
@kanzurethat's like being concerned about consciousness. if it does the same thing, why would i care if it has a soul or whatever? who the fuck cares.14:33
@fennremember how hard it was to define what is and is not a chair14:33
nmz787_jonathan___: ever use Altera Quartus II?14:33
jonathan___cause if it's alive it has a right to vote which means it has a political view which means it also has to pay taxes LOL14:33
@kanzurei thought the package maintainer would do that14:33
nmz787_fenn: cyclohexane can be a chair14:34
jonathan___no I am not a vlsi engineer14:34
@kanzurejonathan___: no, there are many living things that do not have a 'right to vote'14:34
@kanzurehuh? you're not vlsi? really now..14:34
@kanzuredo you scribble your architectures out by hand only?14:34
jonathan___but they have a right to be taxed!   and they will be!  just let the irs implant the rfid tags for tracking...14:34
nmz787_installing the software for the terasic DE0-Nano14:35
jonathan___I like not going home and seeing only green and purple lines in my field of vision lol14:35
nmz787_it's got like 22000 Logic Elements, and a few buttons and LEDs... 72 GPIO14:36
jonathan___I use soc's I dont fab soc's14:36
nmz787_guess a blinky LED will be sufficiently hard for me since i don't know verilog/vhdl at all14:37
nmz787_which it includes14:37
nmz787_jonathan___: i'm not fabbing!14:37
@kanzureverilog is pretty easy14:37
@kanzurejavascript is worse14:37
nmz787_ok14:37
nmz787_that's good14:37
@kanzureverilog syntax will make you cry, though14:37
jonathan___I used ABEL and some vhdl, pretty much ignored verilog14:38
nmz787_blah14:39
jonathan___abel is yuck https://en.wikipedia.org/wiki/Advanced_Boolean_Expression_Language14:39
nmz787_abel in google comes up with religious crap14:39
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jonathan___i didnt use either in industry.   super old dumb project of mine: http://web.archive.org/web/19990420050028/http://www.ee.calpoly.edu/~jcline/ee/palboti.htm14:40
nmz787_jonathan___: so does that mean you don't often use fpgas/cplds14:40
nmz787_?14:40
jonathan___well, not dumb, but simple14:40
jonathan___no, i do not custom code fpgas or cplds14:40
jonathan___like I said I use soc's14:40
jonathan___I think there is very little reason to custom code fpgas in general14:41
@fennwhat is the word for fpga code? is it firmware? software? some other word?14:41
nmz787_an soc is totally different purpose sometimes though14:41
jonathan___unless it is chip simulation or very high performance computing14:41
jonathan___soc at 1ghz is basically faster than yesterdays fpga's anyway and much easier14:42
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jonathan___even arm9 at 120 mhz is faster than needed for "most" stuff14:42
nmz787_unless you need to toggle lines syncronously14:42
jonathan___fpga is only used to simulate the hardware accellerated blocks until they become part of the soc14:43
nmz787_but even then, you can always shift bytes to an atmega port14:43
jonathan___what is "synchronously"14:43
jonathan___ 1ns?  1 us?14:43
nmz787_if you only need 8 synced gpios14:43
nmz787_at same time14:43
jonathan___ummm14:43
nmz787_if there was a delay, it's async14:44
jonathan___why not just write all 1's to the output latches at one time.14:44
jonathan___what is "delay"14:44
jonathan___it is all relative14:44
nmz787_your seconds14:44
nmz787_so what's your area of expertise?14:44
@fennthis is why we have "enable" pins14:44
nmz787_do any mixed-signal ?14:45
jonathan___uhh if you're looking for answers you'll have to describe the problem14:45
nmz787_hah, 14 years ago you said " I think Abel HDL is ridiculously pedantic and I hope I don't have to use it in the future.14:45
nmz787_"14:45
jonathan___and I was right!14:45
nmz787_just wondering what kind of questions I /could/ throw at you14:45
jonathan___everyone agrees!  no one liked abel...14:45
@kanzurejonathan___: nate has a constant need for a person he can ask optics questions to14:46
jonathan___well if you want to blink led's say, and you want them to be synchronous, the delay on the lines obviously doesnt matter since they're just led's anyway.  i.e. delay is relative14:46
jonathan___if you're pulsing a laser for optical transmission lines then even then it depends on your bitrate14:46
jonathan___dude that project rocked14:47
jonathan___way better than the grad students ever did too14:47
jonathan___and here we were just some punk kids off the street14:47
jonathan___LOL14:47
jonathan___umm14:48
@fennwrong channel?14:48
nmz787_kanzure: well being that he has an ieee email and not spie email is telling me that he wouldn't respond well to optics questioons14:48
jonathan___you can ask me stuff like..   digital design.  simple amplifier design.  low level software.  "web apps" LOL14:49
nmz787_my email being gmail means i am an expert at gmail14:49
jonathan___I dont know anything about prisms.14:49
@kanzurenot even the spying kind? :(14:49
nmz787_lol14:49
jonathan___Ummm  I did dsp software algorithms for audio and video and optimal filter design.14:50
@kanzurempeg?14:50
jonathan___image processing.   not motion.14:50
jonathan___it's kind of simple actually14:51
gradstudentbotWho's timer is going off?14:51
nmz787_me too!14:51
nmz787_but more entry-level stuff14:51
jonathan___that stuff, once you figure it out (the alg), is baked into hardware14:51
nmz787_i programmed an interfaced dsp code blocks14:51
nmz787_but didn't come up with the algos14:51
nmz787_and*14:51
jonathan___the dsp software i got into was not possible (realistically) to bake into hardware14:51
jonathan___I dont have my paper online I guess...14:52
nmz787_paperbot: http://www.sciencedirect.com/science/article/pii/0038092X8690118014:52
paperbotno translator available, raw dump: http://diyhpl.us/~bryan/papers2/paperbot/The%20effect%20of%20dust%20accumulation%20on%20line-focus%20parabolic%20trough%20solar%20collector%20performance.pdf14:52
jonathan___http://web.archive.org/web/19990420110440/http://www.ee.calpoly.edu/~jcline/ee/speechrec.htm14:52
jonathan___simple audio stuff14:52
gradstudentbotI think more research is required.14:53
jonathan___I dont have my optimal filtering stuff is online. that was much cooler.14:53
jonathan___ummm I used to scrape for piclist before it was called scraping.  http://web.archive.org/web/20000823040946/http://www.ee.calpoly.edu/~jcline/pic-links.htm14:54
@kanzurepfft piclist14:55
@fennyour web counter shows 13 billion hits14:55
@kanzureyou know that's still around14:55
jonathan___maybe i should have renamed it reddit and gone ipo with it14:55
@fenner, 1.3 billion14:55
jonathan___piclist was very high quality back then14:55
jonathan___I dunno about now14:56
@kanzurefenn: crawlers artificially inflate those numbers14:56
@fennin 1999?14:56
ParahSail1nkanzure, pull request on paperbot14:56
@kanzureParahSail1n: awesome14:56
@kanzurefenn: yes, that was the search engine wars. remember?14:56
@kanzurelet's see..14:56
@kanzurehttps://github.com/kanzure/paperbot/pull/1414:56
ParahSail1ni havent tested the function on a large sample set of user input urls14:56
ParahSail1nit just goes through html looking for "pdf" in <a> and <frame> tags14:57
jonathan___dudes note the tagline at the bottom of the page  "Best viewed with the Opera Browser. "  LOL14:57
@kanzureParahSail1n: when should scihubber be called?14:57
jonathan___ok i'm gonna jump in the ocean now.14:57
ParahSail1nnot sure, do you want sci-hub as fallback, or as the first attempt to fetch?14:58
@kanzurehrm14:58
@kanzurelet's go with fallback. because zotero translation-server still collects metadata either way.14:58
@kanzureso it will be an alternative to download_url.14:58
ParahSail1nis there a python builtin of lambda x:x?14:59
@fennyes14:59
ParahSail1nwhoa wtf, None is the identity function?15:03
ParahSail1nNone :: None, but also :: a -> a15:03
@fennuh, None shouldn't be callable15:04
ParahSail1noh, its a special case of filter -- filter(None, _) === filter(lambda x:x, _)15:04
ParahSail1nthe fuck15:05
@fenn"If function is None, return items that are true."15:06
ParahSail1nill stick with the lambda identity function, just because it mathematically makes sense, even though its slightly more verbose15:06
@fennwhereas lambda x:x would return False sometimes, i guess15:06
ParahSail1ni guess there's all kinds of unexpected, bizarre polymorphism in the python std lib15:08
@kanzureokay, so download_url will use scihubber as a fallback. hrm.15:08
@kanzuretoo bad download_url wasn't written well. if there was an exception thrown i could just call scihubber instead.15:08
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ParahSail1nit is difficult for me to backtest scihubber on a set of user input, since i get exceptions from request.get all the time through this unreliable proxy server15:10
@fennoh i guess filter(lambda x:x, _) won't return False after all15:11
ParahSail1nits exactly equivalent to filter(None15:11
@kanzureParahSail1n: requests.get(url, proxies={"http": "131.252.130.248:8050"}, cookies={"q1s29hd73gs1aasj2993gr7es922":""})15:13
ParahSail1nok, thx15:13
gradstudentbotGod, I'm going to quit.15:14
nmz787_gradstudentbot: so you are religious?15:17
gradstudentbotWho's doing journal club today?15:17
@fennis it just me or is she saying new things lately?15:19
@fennword of the day: isohedonic15:22
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ParahSail1nkanzure, i can only do 100 tests on this cookie?15:26
@kanzureyes :)15:26
@kanzurehaha15:26
ParahSail1nand thats http requests total15:27
@kanzuredunno15:27
ParahSail1nso when i traverse from page to page, i consume like 5 requests?15:27
@kanzurei think it's per pdf maybe15:27
@kanzureit got you http://sci-hub.org/pdfcache/e75af4ae9c09bc8a80d1a5ff3c21040b.pdf15:28
ParahSail1nah, per pdf15:29
ParahSail1ndoing back test on the first 20 or so urls people in here gave paperbot in june15:32
@kanzurei think you are being more thorough than i was15:33
@kanzure>> GET http://www.thieme-connect.de.sci-hub.org//HTML/sso/ejournals/password_reset.htm?hook_url=https://www.thieme-connect.de/ejournals/pdf/10.1055/s-1992-26132.pdf    15:33
@kanzurehttp://libgen.org/scimag5/10.1016/j.neuroimage.2013.05.090.pdf15:34
@kanzurelooks like one of them was a cache-hit15:34
ParahSail1nworks on 50% of them15:34
ParahSail1nnot bad15:34
@kanzurefor some reason http://wisee.cs.washington.edu.sci-hub.org/wisee_paper.pdf gives a donation page15:35
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@kanzuremany of them are a donation page15:35
@kanzureoh, the reason is because you are not sending the cookie i told you to send15:35
@kanzurehttp://www.libgen.org.sci-hub.org/scimag5/10.1002/anie.201300680.pdf15:35
@kanzurei wonder why this is libgen.org.sci-hub.org instead of just libgen.org15:36
@kanzureyeah, like on http://ieeexplore.ieee.org.sci-hub.org/Xplore/home.jsp you are not sending the cookie15:36
ParahSail1nresults http://pastebin.com/xJQjjs3P15:39
ParahSail1nim testing it with hodor = lambda q: scihub2.scihubber(q, proxies={"http": "131.252.130.248:8050"}, cookies={"q1s29hd73gs1aasj2993gr7es922":""}) -- the cookie should be going through15:40
ParahSail1nanyway, isnt nature broken currently?15:41
ParahSail1npaperbot, http://www.nature.com/nm/journal/v18/n9/full/nm.2913.html15:41
paperbotHTTP 401 unauthorized http://www.nature.com/nm/journal/v18/n9/pdf/nm.2913.pdf15:41
ParahSail1nok, so scihubber gets nature correctly at least15:42
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@kanzurehehehe15:43
@kanzurehttp://sci-hub.org/mail/link.php?link=1&url=Ij48aDE%2BaGVsbG8gY3J1ZWwgd29ybGQgKHhzcyk8L2gxPjwhLS0=15:43
@kanzurebase64 xss :)15:43
ParahSail1nim kinda surprised just searching <a> and <frame> tags for pdf works that well15:43
@kanzure"works"15:43
@kanzurewell you are missing all the metadata15:43
@kanzureso keep that in mind15:43
ParahSail1nhm thats true15:44
ParahSail1nlooks like one of my test cases was already a libgen.org one15:45
ParahSail1nthats why it did libgen.org.sci-hub.org15:45
@kanzurewhy are some of these "Donate" pages?15:45
@kanzurelike your last scitation test ended up being a donation response15:45
@kanzureyour request to scitation.aip.org.sci-hub.org did not include the cookie15:46
@kanzureyou have a request somewhere in your code that is not including the cookie, yo15:46
ParahSail1nrequests.get(_url, **kwargs) is the only instance of that function in here15:47
ParahSail1nwhen did i do a scitation.aip.org request?15:48
@kanzureParahSail1n: http://diyhpl.us/~bryan/irc/paperbot-parahsailin.mitm15:50
@kanzureParahSail1n: sudo pip-2.7 install mitmproxy15:50
@kanzuremitmproxy -r paperbot-parahsailin.mitm15:50
@kanzurethis will show the requests you made15:50
ParahSail1nmitmproxy has a lot of prereqs, hang on a sec15:58
ParahSail1nand apparently mitmproxy doesnt know it require flask16:00
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@kanzurei don't think it requires flask?16:00
ParahSail1nit looked for it when i tried running it16:01
ParahSail1ni guess pip failed on lxml, thats why16:02
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ParahSail1nanyway, no idea why that cookie is not in that final request, but im fairly certain that in every call of requests.get that scihubber does, the kwargs should all be included16:06
ParahSail1nif the kwargs were not included, the mitmproxy wouldnt pick it up at all anyway16:06
gradstudentbotWell, I can't really talk about it because I'm trying to get it published in Science or Nature.16:08
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ParahSail1ni wonder how libgen converts doi to metadata16:35
ParahSail1nah "GET "Accept: application/rdf+xml"16:36
ParahSail1nhttp://dx.doi.org/10.1126/science.169.3946.635 "16:36
ParahSail1nso all you need to get the metadata is find the doi, so ill make a tagsearcher to find the doi16:41
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@kanzureright now paperbot isn't doing anything with metadata anyway16:42
@kanzureso.. this is why i groaned when i found out sci-hub was written in php,16:46
@kanzurehttp://sci-hub.org/js/inject.inc16:47
ParahSail1num really?16:47
@kanzureit's a pretty safe bet that a hole like this is going to be present if a site is written in php, in general16:48
@kanzurejust because of the culture around php16:48
ParahSail1nheh16:51
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@kanzurex-highwire-user:             memno=AR50140; name=University%20of%20Toronto%2C%20Serial%20Department; type=INST; ip_access=true                                          16:59
ParahSail1nadded a small patch to search iframe tags too17:01
ParahSail1nwill add parsing for doi and will push revision17:01
@kanzurecan you also push a commit to default to falling back to scihub?17:03
ParahSail1nsure17:04
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abetuskpoke gradstudentbot17:19
gradstudentbotThe fluorescent microscope is broken.17:19
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ParahSail1ndude is quite fast with banning ips17:45
ParahSail1nkanzure, is your mitmproxy down?17:46
@kanzureyes, it's down17:46
@kanzureokay it's back up17:46
@kanzurehave fun17:46
@kanzurei didn't want to leave that open forever because there are people in the world doing port scans of the entire internet and will eventually use that port as a proxy17:47
gradstudentbotYeah, but that was only a sample size of one.17:49
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yashgarothis gnusha broken?17:51
@kanzurewhat happened?17:52
yashgarothhttp://gnusha.org/logs/2013-07-05.log ends at 11:2717:52
@kanzureyes that's my fault17:52
@kanzureone moment17:52
yashgarothhttp://gnusha.org/logs/2013-07-05.log ends at 11:2719:52
@kanzureyes that's my fault19:52
@kanzureone moment19:52
@kanzureyashgaroth: try now. it will still be broken for the rest of the day i think.19:54
yashgarothah much better thanks19:55
@kanzurethere was some censorship19:55
@kanzurenothing to be concerned about19:55
yashgarothoh, about the ███████████?19:56
jrayhawk"RepRap Morgan Receives $20,000 Gada Prize"19:57
@kanzureoh look they did things19:57
@kanzureamazing19:57
jrayhawkwell, at least some of that money didn't disappear up a plus-shaped rathole19:57
@kanzureyeah19:58
jrayhawkhere's hoping for some fine print about administrative fees19:58
@kanzurefees should be covered by whatever interest they accumulated19:59
jrayhawkha ha good fiscal management19:59
@kanzurealso, i think the makerbot acquisition means adrian bowyer has at least doubled his wealth (probably more, he dumped in $20k in an angel round to makerbot), so he could possibly cover any oversights from humanity+ if he would forgive me for my terrible recommendations.20:00
klafkalol20:00
@kanzurebrownies: if an angel dumps in $20 or $25k at day one into a company, and then exits 4 years later at $400 million, how much do you guestimate the angel is going to get?20:02
brownieskanzure: uh... do you have more data? what was the funding history like?20:02
@kanzurethere was a $10M round at some point. but between the angel round and that round, i think there was nothing.20:02
browniesand then the company exited for 400M?20:03
@kanzure$200M cash, $200M stock20:03
brownieswell, suppose the 25K went in YC-style, so... he bought ~6% of the company at the time?20:03
@kanzure$10M round was in 2011-09-0220:03
@kanzurethere were maybe 4 total people dumping in $25k. iirc.20:03
browniesoh that's different. so not really day one?20:04
brownieswhat vertical was the company in?20:04
@kanzuremakerbot?20:04
browniescan you just link me to crunchbase -_-20:04
browniesoh. ok. let's see.20:04
@kanzurehttp://crunchbase.com/company/makerbot20:04
@kanzureweird that thy don't list the seed round20:04
@kanzure"The company started shipping kits in April 2009 and has sold approximately 3,500 units as of March 2011. Demand for the kits was so great in 2009 that the company solicited MakerBot owners to provide parts for future MakerBots from their own MakerBots.[3] Seed funding of $75000 was provided by Jake Lodwick ($50000) and Adrian Bowyer and his wife Christine ($25000).[4]"20:05
@kanzureokay. $75k seed round.20:05
brownieshm. no premoney disclosed for the 10M round... let us suppose conservatively it was 40M post-money i.e. they sold another 25% of the company20:05
browniesoffhand, i'd suggest that 100x return is probably a decent guess for the angel returns.20:07
@kanzurewell, they probably had sales of 10,000 at that point. maybe 15,000.20:07
browniesaha. and how much was a makerbot? $500?20:08
@kanzurelet's say $1000.20:08
browniesso they had 1.5M in sales? hmm20:10
@kanzuremakerbot replicator 2 (from late 2012) is $2100. the thingomatic from 2010 was $1300 for the kit and $2500 for the assembled version.20:10
@kanzureuh, 10k * 1k does not equal $1.5M.20:10
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browniesoh yes. i suppose you're right. i'm really bad with powers of 10.20:13
@kanzurebut those are the ones that matter the most!20:13
@kanzureat least in our bas system.20:13
@kanzure*base20:13
browniesi know -_-20:14
browniesso they had ~10-15M in sales? that's not bad at all. perhaps they got a much better valuation.20:14
@kanzurein 2012 they did $70M in sales20:14
brownieswhoa then why did they sell for such a low price?!20:15
brownies5x revenue multiple... wtf, man.20:15
browniesshouldn't it be more like 10x?20:15
@kanzureoh i am wrong20:15
@kanzure"Makerbot had $15.7 million in sales for 2012"20:15
@kanzurehttp://www.3ders.org/articles/20130621-ceos-explain-the-$604-milion-stratasys-and-makerbot-deal.html20:15
browniesnow it's a 600M deal?20:16
@kanzureit's $400M and then some other junk that i haven't looked into20:16
browniesahh... performance20:16
browniesthe deal is worth "up to" 600M20:16
@kanzure"Makerbot had $15.7 million in sales for 2012. During the first quarter of 2013, MakerBot generated $11.5 million in revenue and has sold more about 22,000 3-D printers since its founding in early 2009."20:17
browniesbut looks like makerbot was killin' it... they appeared to be on track for ~50M of revenue in 201320:17
gradstudentbotSure, I've been spending a lot of time at a pub.... well, pubmed at least.20:17
browniesin which case, okay, so a 400M - 600M deal seems reasonable. 8x - 12x revenue multiple.20:17
@kanzureand i was thinking adrian got maybe $2-$5M out of this20:17
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browniesyeah, like i said, ~100x, give or take.20:19
@kanzureoh, so $25M?20:19
* brownies multiplies things20:20
browniesi'm like 80% sure that 25K * 100 = 2.5M20:20
@kanzureyeah i'm not sure why i failed that time20:20
browniesSEE?! those damn tens.20:20
@kanzurei call it.. optimistic multiplication.20:20
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@kanzure"The sudo room mesh networking group has gotten to the point where we are nearly ready to launch a free community wireless network in the east bay! Take a look at our map to see where we are."20:29
klafkakanzure: wow as the founder he only got that much?20:29
klafkathat kind of sucks20:29
@kanzureadrian wasn't a founder20:29
@kanzurethe founders were bre and zach20:29
klafkaaaah20:29
klafkai see20:29
brownieshe put in 25K and then they called him back a few years later and gave him 2.5M20:41
browniesnot a bad deal, really.20:41
klafkayeah i would like ot have that happen to me as well20:44
klafkaplease20:44
@kanzurewin 420:45
@kanzureoops20:45
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ParahSail1nkanzure, pull request21:31
@kanzureboth pull requests, still?21:33
ParahSail1ni withdrew the previous21:33
ParahSail1ni did not put the secret cookie into the code, so all you need to do is make that substitution21:33
@kanzureokay, reading some code21:34
ParahSail1nadded in libgen upload21:35
@kanzurelooks good21:35
@kanzuremerged, let me edit real quick21:36
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jonathan___"For UK business coach and turnaround specialist Peter Ryding, successful entrepreneurs are predominantly born that way. ... "I would say the simple answer is 70% born, 10% nurture, and 20% trainable," he says. ... Mr Ryding says such people have two core genetic characteristics, which he terms "adaptive thinking" and "seeing reality with a positive spin". "    --> capitalists are mutants21:42
ParahSail1npaperbot, http://pubs.acs.org/doi/abs/10.1021/ja403595721:45
paperboterror: HTTP 500 http://diyhpl.us/~bryan/papers2/paperbot/Complex%20Archimedean%20Tiling%20Self-Assembled%20from%20DNA%20Nanostructures.txt21:45
gnushahttps://secure.diyhpl.us/cgit/paperbot/commit/?id=23a924d7 rcallahan: Sci-hub traversal21:46
gnushahttps://secure.diyhpl.us/cgit/paperbot/commit/?id=8a2ea312 rcallahan: Crazy python polymorphism21:46
gnushahttps://secure.diyhpl.us/cgit/paperbot/commit/?id=32be49ae U-ACORNSYS\pwang: DOI search21:46
gnushahttps://secure.diyhpl.us/cgit/paperbot/commit/?id=4e62cd16 U-ACORNSYS\pwang: DOI search21:46
gnushahttps://secure.diyhpl.us/cgit/paperbot/commit/?id=76573efd U-ACORNSYS\pwang: LibGen upload21:46
gnushahttps://secure.diyhpl.us/cgit/paperbot/commit/?id=eb40df31 Bryan Bishop: Merge pull request #15 from rcallahan/master21:46
gnushahttps://secure.diyhpl.us/cgit/paperbot/commit/?id=da8ac290 Bryan Bishop: clean up whitespace21:46
gnushahttps://secure.diyhpl.us/cgit/paperbot/commit/?id=08927457 Bryan Bishop: docstring for modules/scihub.py21:46
gnushahttps://secure.diyhpl.us/cgit/paperbot/commit/?id=c5f46485 Bryan Bishop: use an environment variable for sci-hub.org auth21:46
gnushapaperbot: reload papers21:46
paperbotImportError: No module named scihub (file "/srv/ikiwiki/paperbot/modules/papers.py", line 11, in <module>)21:46
@kanzureinteresting21:46
gradstudentbotSorry for wasting your time.21:46
@kanzure:)21:47
gnushahttps://secure.diyhpl.us/cgit/paperbot/commit/?id=f618da8e Bryan Bishop: use a relative import21:48
paperbotAttributeError: 'NoneType' object has no attribute 'findall' (file "/srv/ikiwiki/paperbot/modules/papers.py", line 46, in download)21:48
gnushapaperbot: reload papers21:48
paperbotgnusha: papers: no such module!21:48
@kanzureoh god things are exploding21:48
@kanzurefor line in re.findall('http[s]?://(?:[a-zA-Z]|[0-9]|[$-_@.&+]|[!*\(\),]|(?:%[0-9a-fA-F][0-9a-fA-F]))+', line):21:49
@kanzureusing the same variable for two different things21:50
ParahSail1nwacky python and scoping issues21:50
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ParahSail1ni'd almost forgotten why i only use one or two letter variables in haskell21:51
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ParahSail1nor is it the use of line in two places that is broken there?21:53
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ParahSail1noh, i really should have "from scihub import scihubber, libgen" there21:54
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@kanzurethere are multiple broken things going on21:56
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gradstudentbotDon't phage me, bro.21:57
jonathan___in my team's python coding standard, "from xx import yy" is illegal.  only "import xx" is allowed.21:58
gnushapaperbot: reload papers21:59
@kanzurejonathan___: yeah, that's the right way to use python22:00
jonathan___guys dont like my coding standard at first and always try to resist.22:00
gnushahttps://secure.diyhpl.us/cgit/paperbot/commit/?id=576cd008 Bryan Bishop: fix python import syntax22:01
jonathan___finally I have to tell them "just follow it, period."22:01
gnushapaperbot: reload papers22:01
@kanzurejonathan___: yeah, there's good reasons to not use "from ... import".22:01
@kanzurejonathan___: i would almost rather see __import__() calls22:01
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ParahSail1nno from in import statements?22:05
gnushahttps://secure.diyhpl.us/cgit/paperbot/commit/?id=db89d562 Bryan Bishop: use full paths to modules in phenny22:10
gnushapaperbot: reload papers22:10
ParahSail1ni think you're allowed at least to put as clauses in python import statements22:11
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@kanzureParahSail1n: okay. should be working now.22:13
ParahSail1npaperbot, http://pubs.acs.org/doi/abs/10.1021/ja403595722:13
jonathan___there is no need to use "from x import y" except speed & memory which is typically not important. it just corrupts namespace.22:13
@kanzurejonathan___: and it becomes hard to mock using libraries like "mocks"22:14
jonathan___overloading, eh?22:14
@kanzurejonathan___: it's useful for testing without actually calling remote code, if that makes sense22:15
paperbothttp://diyhpl.us/~bryan/papers2/paperbot/4a3de4bdd42249c195a96c58c82367a5.pdf22:15
jonathan___oh that's interesting.22:15
@kanzurefor instance, you can check your handling code that is supposed to work, even if it normally calls something that takes 20 minutes22:15
@kanzurewho the hell wants to wait around for that test to finish? not me.22:15
ParahSail1nfwiw, that url used to trip up paperbot22:15
@kanzure(and the longer tests that really use that 20 minute thing, are known as integration tests, and not unit tests)22:15
@kanzureParahSail1n: excellent22:16
jonathan___my one pet peeve with python is it's error messages and horrible backtrace display22:16
ParahSail1ni wasnt able to get a doi for that one for some reason22:16
ParahSail1ni never use python for serious things22:17
gradstudentbotIf I write this paper, then maybe I can use that as my thesis?22:17
ParahSail1npaperbot, http://ieeexplore.ieee.org/xpl/login.jsp?tp=&arnumber=6103636&url=http%3A%2F%2Fieeexplore.ieee.org%2Fxpls%2Fabs_all.jsp%3Farnumber%3D610363622:18
paperbothttp://diyhpl.us/~bryan/papers2/paperbot/6df237bb499cb3acf77295a63572148.txt22:18
@kanzurelogin.jsp links are bad22:18
ParahSail1njust going through logs looking for ones that used to be broken22:19
@kanzurepaperbot: http://ieeexplore.ieee.org/xpls/abs_all.jsp?arnumber=610363622:19
paperbothttp://diyhpl.us/~bryan/papers2/paperbot/934ea7423765719dddd0e84c7c2aa862.txt22:19
ParahSail1npaperbot, http://pss.sagepub.com/content/early/2013/05/13/095679761246641522:19
paperbotTypeError: libgen() got an unexpected keyword argument 'headers' (file "/srv/ikiwiki/paperbot/modules/papers.py", line 142, in download)22:19
ParahSail1nsounds like it found a doi for that one22:20
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ParahSail1nsent a fix in22:28
gnushahttps://secure.diyhpl.us/cgit/paperbot/commit/?id=373076ef U-ACORNSYS\pwang: import libgen22:29
gnushahttps://secure.diyhpl.us/cgit/paperbot/commit/?id=a86e32c9 U-ACORNSYS\pwang: libgen kwargs22:29
gnushahttps://secure.diyhpl.us/cgit/paperbot/commit/?id=a7b7b46d Bryan Bishop: Merge pull request #16 from rcallahan/master22:29
gnushapaperbot: reload papers22:29
paperbotgnusha: <module 'papers' from '/srv/ikiwiki/paperbot/modules/papers.py'> (version: 2013-07-06 03:10:04)22:29
ParahSail1npaperbot, http://pss.sagepub.com/content/early/2013/05/13/095679761246641522:29
paperbotTypeError: libgen() got an unexpected keyword argument 'headers' (file "/srv/ikiwiki/paperbot/modules/papers.py", line 142, in download)22:30
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ParahSail1nim not sure how you're invoking the cookies on the requests.get kwargs, so ill leave that to you22:37
@kanzureParahSail1n: it should be obvious.. pull.22:37
@kanzuregit remote add kanzure git@github.com:kanzure/paperbot.git22:37
@kanzuregit fetch kanzure22:37
@kanzuregit checkout remotes/kanzure/master22:37
ParahSail1nuh oh, my HEAD is detached22:41
@kanzurethat's okay. git branch -l to see your branches. then git checkout branchname.22:41
* ParahSail1n is not very good with git22:41
@kanzureif you want your local branch master to be the same as your local remote-tracking branch remotes/kanzure/master you can do this: git checkout master && git merge remotes/kanzure/master22:41
ParahSail1nok the kwargs should be consistent now22:47
@kanzureoh this was my fault?22:48
@kanzurei don't understand. i thought you had **kwargs on libgen. why would it say "headers" was unexpected?22:49
@kanzurehttps://github.com/rcallahan/paperbot/commit/64a0ae876de8b8382d047af7ba52f519e139f18d22:49
ParahSail1nyeah that doesnt make sense22:49
@kanzureoh i know what's going on22:50
ParahSail1ni took out the headers business anyway22:50
ParahSail1ni had left that in as a placeholder expecting you to handle the cookie thing a bit differently22:50
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ParahSail1npaperbot, http://pss.sagepub.com/content/early/2013/05/13/095679761246641522:53
@kanzureit works22:54
@kanzurethis is without your latest commit22:54
paperbothttp://libgen.org/scimag5/10.1177/095679761246641522:54
ParahSail1n:)22:54
@kanzurei am really confused because it looks like i have to do multiple things to get phenny to use the updated modules22:54
ParahSail1nhm, looks like that upload failed22:55
@kanzurei thought it used /srv/ikiwiki/paperbot/modules/ but it seems to use /home/bryan/code/paperbot/modules/ instead. which doesn't make much sense. the phenny config says to use /srv/ikiwiki/paperbot/modules/.22:55
@kanzurei don't see any output on the console about upload failure22:55
ParahSail1ncan you put mitmproxy back up?22:59
@kanzuredone22:59
ParahSail1npaperbot, http://pss.sagepub.com/content/early/2013/05/13/095679761246641523:00
ParahSail1ni think sci-hub uploads to highwire as well as libgen23:01
paperbothttp://libgen.org/scimag5/10.1177/095679761246641523:01
@kanzurehighwire is an evil publisher. i really doubt it.23:01
ParahSail1noh23:02
@kanzurei am getting the strangest fucking spam23:10
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@kanzureweirdest spam23:16
@kanzurehttp://heybryan.org/shots/2013-07-05-2313-china-spam-urea.png23:16
paperbotTypeError: unicode() argument 2 must be string, not None (file "/usr/local/lib/python2.7/dist-packages/requests/models.py", line 825, in text)23:16
@kanzurewhy is that sent to both me and fenn?23:16
@kanzureand why am i getting random spam images of urea factories in china??23:16
@kanzurei mean, urea is actually slightly relevant to my interests, especially for certain reactions.... but still.23:17
@kanzureand then somehow gmail is unable to detect that this is spam?23:17
@kanzuream i buying an entire urea production facility? maybe that's what this is.23:17
@kanzurebut then why is it also being sent to fenn?23:17
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jonathan___did you guys see "Epic Games has released a new version of its popular Epic Citadel tech demo that runs entirely using open HTML5 and JavaScript standards in order to show off the potential for plugin-free game development inside a Web browser."23:17
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jonathan___what year did javascript become non-lame?23:35
@kanzurewhenever v8 happened23:36
browniesi find the premise of your question ridiculous.23:39
jonathan___what do you use as an sdk for javascript besides using html files and pressing reload constantly?23:39
browniesan "SDK" for javascript?23:39
jonathan___a non-browser js interpreter23:40
@kanzuretools like compass help you with not pressing reload23:40
@kanzurenon-browser js interpreters include v8, even though it is used in a browser23:41
jonathan___a browser is a rather lame test platform23:41
@kanzurenodejs is just a project based on v8 for server-side javascript23:41
@kanzureincluding standards like commonjs for require() (basically, javascript dependencies and javascript packages)23:41
@kanzuresubstack was kind enough to write a method to make nodejs modules (npm modules) work in browsers, called browserify23:42
@kanzurehttp://browserify.org/23:42
@kanzurehttp://nodejs.org/23:42
paperbotTypeError: unicode() argument 2 must be string, not None (file "/usr/local/lib/python2.7/dist-packages/requests/models.py", line 825, in text)23:42
@kanzurehttps://npmjs.org/23:42
@kanzurenow, if you want something more related to front-end development, then i recommend looking at https://github.com/bower/bower http://bower.io/23:44
@kanzureand for other front-end development workflow stuff there's http://yeoman.io/ (but really, using this is a little unnecessary, but it's good for introducing you to things)23:44
@kanzureto further complicate literally everything, i released an npm module that doesn't run on the nodejs engine and instead runs on the phantomjs engine (which is not v8, it's JavaScriptCore, another terrible js engine).. https://npmjs.org/package/phantomjs-test-provisions https://github.com/kanzure/phantomjs-test-provisions23:45
jonathan___interesting23:47
jonathan___so, chrome has a google js package of some type which will allow usb communication in javascript23:48
brownieseh... yeoman seemed really gratuitous when i looked at it23:48
@kanzurethat's probably some compiled plugin thingy and not a w3c standard23:48
@kanzurebrownies: true, but it introduces you to grunt, bower and some other things, like an alternative to compass23:48
@kanzurei just can't remember what it uses instead of compass23:48
browniesi guess.23:48
@kanzurealso it introduces you to nodejs, npm, commonjs stuff, bower modules, npm modules, and even angularjs/backbonejs/other things. and front-end testing.23:50
jonathan___so basically js requires external packages to be useful23:51
jonathan___I didnt realize require() is a 3rd party app in essence23:51
@kanzurewell, not quite.. but packages are useful things to make your code understandable23:51
@kanzurerequire() is multiple things. there is the standard-- commonjs and amd-- but also there's a library called requirejs that makes it available in a browser by including a <script> element.23:51
browniesfront-end require() is horrendous23:52
@kanzureout-of-browser js of course requires an execution environment, a javascript engine, just like java bytecode requires the jvm or python requires the python vm thing.23:52
browniesjust a terrible, terrible idea.23:52
@kanzurefront-end modules are a good idea, i think23:52
@kanzureyou are just bitchy because you never figured out how to use the non-stupid version of front-end requirejs23:52
@kanzurelike volojs23:52
browniesyou claim to know an awful lot of backstory, for a guy who doesn't know any backstory...23:53
@kanzurehuh? we've talked about it before.23:53
browniesi did figure it out, but it's just too many damn hoops to jump through for not much gain. i'd rather let Rails jam everything into one giant JS file, minify it, CDN it, and call it a day.23:53
@kanzureyou were doing the one where it makes multiple requests23:53
@kanzureinstead of the one where it gets combined23:53
@kanzurehuh? yeah you can still use requirejs even when it gets into one giant file.23:54
browniesit makes multiple requests by default unless you set up all kinds of wacky things to get it to not do that23:54
browniesright, but by that point... why not just asset-pipeline it.23:54
@kanzurei'm pretty sure it's not that hard to setup to not be stupid?23:54
@kanzuremaybe i'm wrong.23:54
browniesit also breaks thoroughly if you involve a CDN, whereas the asset-pipeline knows how to handle CDNs23:54
jonathan___so in the end, maybe js is still lame.  LOL23:54
browniesah, so you've never actually done it. wonderful.23:54
brownies-_-23:55
@kanzureanyway, even if you put it through an asset pipeline, which you should, you should also still use modules that explicitly say what the fuck they depend on.23:55
@kanzurejonathan___: javascript still has a lot of warts23:55
brownies"i could totes build that in a weekend. i'm pretty sure it's not that hard."23:55
browniesi think the gain of explicitly declaring those dependencies only comes about if you have some enormous project.23:55
@kanzurejonathan___: but modules and testing really help make javascript less awful23:55
browniesand i didn't, so i ditched it all and ended up with way less code doing the same thing.23:56
@kanzuredo you also disagree with backbone blueprint module things?23:56
@kanzuredoes backbone call it blueprints? i forget.23:56
browniesbackbone doesn't have anything called "blueprints"23:57
browniesit's finally happened. javascript has made your brain soft and weak.23:57
jrayhawkhaha23:58
@kanzurebelieve me, if i could get away from writing javascript, i would23:58
@kanzurethe phantomjs community has been eating away at me23:58
@kanzurethe only way i have to cope is showing off the hilarious stupidity23:58
@kanzurehttp://twitter.com/ughphantomjs23:58
jonathan___can everything be written in python then just converted to js23:59
@kanzureyes, thanks to lkcl and pyjamas23:59
@kanzurelkcl also wrote a thing called pyjamas-desktop that lets pyjamas projects to run on the desktop, it's basically on par with gtk, wx, qt, etc.23:59
jonathan___then why write js at all?23:59
--- Day changed Sat Jul 06 2013
--- Day changed Sat Jul 06 2013
@kanzurebecause we hate ourselves?00:00
@kanzuresome of us don't, http://coffeescript.org/00:00
jonathan___as long as it supports all html5 then great00:01
@kanzurepyjamas is worth looking into, but you should be aware that they have not received as much attention as they should have00:01
@kanzuremostly because everybody finds lkcl to be incomprehensible for some dumb reason00:01
@kanzure(he's a person)00:01
browniescoffeescript is a free/easy win00:02
browniesi suppose you could head into wackier territory on top of that if you really wanted. writing a desktop app in coffee, and whatnot.00:02
@kanzurethat's what appjs is.00:02
@kanzureit's nodejs as the backend and then webkit/html as the front-end ui.00:02
@kanzureit's sort of like pyjamas except using nodejs00:03
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@kanzureit's less like pyjamas because i don't think appjs things can be run over the web (without the appjs client software)00:03
@kanzurebrownies: i think phonegap/cordova has transitioned to using npm to manage their stuff. i haven't looked closely.00:04
jonathan___coffeescript?  they wrote a lamer language to run on lame js?  Ummm00:05
jonathan___no wonder the web is so slow.   everyone is writing interpreted languages which run on half-baked interpretted languages which run in a browser vm which runs on an interpretted language which runs in a proprietary vm which runs as a native app.  jeez00:07
@kanzurejonathan___: if i were you, i would start at nodejs things until i got my bearings back00:07
jonathan___and each library is loaded with each web page.  grr00:07
@kanzureyeah, you're going to hate asm.js (recent mozilla development)00:07
@kanzureand emscripten00:07
@kanzurenodejs does not require web pages. non-browser.00:09
jonathan___now maybe if someone ported vim to javascript, that would be cool00:09
jonathan___but oops, js runs in a jail00:09
@kanzureemscripten can do that00:09
@kanzureactually, js does not run in a jail, especialy in nodejs00:10
@kanzurefurther, there are some html5 specs that let js access the file system00:10
@kanzure(only in a limited capacity)00:10
jonathan___well i'll do some looking into nodejs then.00:12
@kanzurealso it pays well, so there's that too00:12
@kanzurein general there's a premium on the market right now for "people who know how to write good javascript" and "people who know how to read motherfucking standards about javascript and commonjs"00:13
jonathan___one of the reasons i stopped writing perl is because perl5 requires tons of 3rd party packages to add real language constructs to perl thus creating ridiculous dependencies.  at least python doesnt have this problem as much altho py3 dependencies are mostly lame00:13
@kanzureand "people who actually understand how to write asynchronous, state/event machine-based, promise-based code that actually fails in a productive way instead of just randomly"00:13
jonathan___why not just write it in C then run the asmjs ?00:13
@kanzurejrayhawk would be a better person to complain about perl things with00:14
@kanzurei haven't used asmjs yet00:14
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jonathan___have you used pyjamas yet?00:14
@kanzurethere's a big advantage to writing in javascript because otherwise debugging is close to impossible, even with those pesky "source maps"00:14
@kanzurei haven't used pyjamas, but i've used parts of it, like pythonwebkit00:14
jonathan___hmm yes debugging would be quite lame00:15
@kanzureif you haven't used the chrome webkit inspector yet, then you're missing out00:15
@kanzurewebkit inspector plus firefox firebug are about the only two reasons why anyone bothers to write javascript that runs in a browser00:15
klafkalol00:15
jonathan___I have some problems using newer native apps on my mac since i'm still at osx 10.500:15
klafkahave oyu guys heard of rapidweaver00:16
klafkajust found a website using it00:16
jonathan___chrome for example wont run00:16
klafkai was like 'why is this fucking website designed so weirdly00:16
klafka'00:16
gradstudentbotMy parents keep asking when I'm going to finish.00:16
jonathan___*newer chromes00:16
@kanzurejonathan___: then i suggest you run a hypervisor and just run newer operating systems in a virtual machine. like linux things. i recommend debian.00:16
gradstudentbotI think I'd like to try to write the paper myself.00:16
jonathan___hm, i could do that yes00:16
@kanzurealso you're about the last person i would expect to run osx. aren't you too paranoid for that?00:17
jonathan___what do you mean paranoid00:17
jonathan___osx is the only good commercial unix00:17
@kanzuredunno man. the package manager is shit. what do you got, just homebrew or something?00:17
jonathan___off the shelf highly upgraded macbook pro00:18
@kanzureoh please. that's only 16 GB. i have a thinkpad sitting here with 32 GB.00:18
jonathan___such memory is not needed unless you're doing something like.. hmm..  running multiple os's in virtual machines lol00:19
gradstudentbotThe grant got rejected.00:19
gradstudentbotSorry for wasting your time.00:19
@kanzurewell, even then it's not needed. really it's gratuitous.00:19
jonathan___it's a great use of a hard drive for a large swap partition though00:19
brownieshomebrew is not the worst thing in the world00:20
browniesalthough it has a worrying insistence on fetching almost everything over unauthenticated HTTP00:20
@kanzuredoes brew fetch pre-built binaries? i haven't checked in a while.00:21
jonathan___homebrewing is not worth it imho.   when I replace this machine I will buy another mac.00:21
browniesno, it gets the source and then compiles00:21
@kanzurejonathan___: homebrew is a package manager for osx. not the same as homebrewing.00:21
browniesit has "recipes" (i forget what they call them...) that it uses to compile on your machine00:21
browniessources? flasks? kegs? something like that.00:21
@kanzurejonathan___: it's like macports except better00:22
@kanzurejonathan___: http://mxcl.github.io/homebrew/00:22
jonathan___oh, must be new.  I was using a couple older ones. i think fink it was00:22
@kanzureyeah fink was hip for a while. not sure why people moved away.00:22
jonathan___mostly it is not that necessary00:22
jonathan___any bsd code recompiles OK00:22
jonathan___not as much need to build from binaries now since most popular apps are native installs now00:23
browniesthe really critical stuff i install myself, without homebrew00:23
brownieslike git, and ruby00:23
browniesyeah, true, i guess you could download the precompiled binaries for things, too.00:24
gradstudentbotDude, you contaminated my experiment.00:24
jonathan___i think I build git from source git version 1.6.300:24
@kanzureit's up to 1.8.x.. i think you might be living under a rock.00:24
jonathan___the macports or fink really kind of mess up osx00:25
@kanzurei haven't seen evidence of homebrew messing up osx lately. but that might be a recent development (last 2-3 years).00:25
jonathan___I dont use git, until I have a need for it00:25
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@kanzure"i don't use git, until i do"00:26
jonathan___my sourceforge for example uses svn and I havent committed to it for a long while00:26
brownieshomebrew is good about keeping things nicely contained00:26
browniesit installs everything with sane user-level permissions and then you can just modify your $PATH00:27
jonathan___soon I'll be forced to update to osx 10.6 snow leopard because I cant even do my taxes as a native app anymore, no 10.5 support00:27
jonathan___though not sure how much longer this 32bit machine will be able to survive in the 64bit world00:27
@kanzureyou have a non-64bit macbook pro?00:28
jonathan___yes00:28
brownieshow old is your machine?00:28
@kanzurekeep rocking on00:28
jonathan___17" version00:28
jonathan___there is no new 17" version00:28
@kanzurethey have 64-bit 17" mbp laptops i think00:28
@kanzurei think mine is one. but it was from pre-2010 or something.00:28
jonathan___15" is bigest00:28
gradstudentbotSure, I've been spending a lot of time at a pub.... well, pubmed at least.00:29
jonathan___I might be able to update the cpu module inside, not sure00:29
jonathan___think about it, the number of api's and such has completely exploded in the past few years00:30
browniesgradstudentbot: calm down. get back to work.00:30
gradstudentbotI feel like you don't completely comprehend the scope of this work.00:30
browniesi don't think the CPU has ever been user-upgradeable00:30
browniesunless you define user-upgradeable to include "soldering irons"00:30
jonathan___the cpu is on a module.00:30
browniesreally?00:31
jonathan___replace the module.00:31
browniesin the 17" MBP?00:31
brownieswild.00:31
jonathan___in the pre-unibody yes00:31
jonathan___it's not user upgradable it's technician upgradable00:31
browniesintriguing.00:31
jonathan___jeez why not recompile friggin everything C into js00:33
jonathan___entire userland00:33
@kanzurejonathan___: that's what https://github.com/kripken/emscripten is00:34
jonathan___then run bash in the browser00:34
@kanzureoh, that's what http://bellard.org/jslinux/ is00:34
jonathan___well, then js debugging should be easy because it's self-hosted right?00:34
@kanzurewell, jslinux is an x86 emulator in javascript, and then it loads up linux, and then there's userland linux00:35
@kanzureso is a stacktrace in javascript about an error in your bash script or w/e going to be particularly helpful?00:35
@kanzurei guss it could be. if your javascript is super clean about how exceptions get propagated up through the x86 emulator.00:36
jonathan___no, a stacktrace of the hello world js after running js directly from bash in the jslinux00:36
@kanzurebtw, anselm (you might know him from diybio) reverse engineered jslinux00:36
jonathan___that's self hosted debugging00:36
@kanzurehttps://github.com/levskaya/jslinux-deobfuscated00:36
ParahSail1noh, finally managed to get lxml installed00:37
gradstudentbotI lost my pipette.00:37
jonathan___jeez assembly processor written in js ridiculous00:38
jonathan___at least it kills java  lol00:39
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ParahSail1nkanzure, should have told me to use lxml, it opens shit without choking on dicks00:57
brownieswhat were you using? bsoup?01:00
ParahSail1ndont even ask01:01
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Burninatehttp://2-sight.eu/en/how-is-argus-r-ii-designed-to-produce-sight-en01:30
BurninateRetina implants01:31
ParahSail1nkanzure, lots revised01:42
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@kanzureParahSail1n: it says you closed it?02:14
ParahSail1nreopened02:14

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