2013-11-21.log

--- Log opened Thu Nov 21 00:00:31 2013
Qfwfq|workpaperbot: http://dx.doi.org/10.1016%2F0012-365X%2894%2990019-100:08
paperbothttp://diyhpl.us/~bryan/papers2/paperbot/afbf5d08fbab9d23e41ac1ecdcb3c61a.txt00:08
nmz787next-gen breast implants: http://ww2.biol.sc.edu/~bergerlab/599%20PAPERS/pdfs/shackleton%202006.pdf00:37
nmz787Generation of a functional mammary gland from a00:38
nmz787single stem cell00:38
nmz787how the hell would you even think of going about engineering a cow to produce the milk of a seal00:39
nmz787get transcriptomes for a bunch of low-fat and high-fat populations of cow and seal.... find which genes were varying, then swap the seal set into the cow... but that wouldn't impact development00:41
nmz787unless you time-sampled the mRNA too maybe00:41
nmz787you might need an end-point measurement to be based on something that would corellate to a difference in anatomy, maybe viscosity?00:43
nmz787"Moose milk has the consistency of thick cream and has the odor of fresh bovine milk"  (10% fat)00:45
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kanzure"Mikhail Kazakov from OpenCascade SAS just announced at the Salome User's Day that next OCCT version will be LGPL"08:23
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juri_Interesting.09:19
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EnLilaSkopaperbot: http://www.sciencedirect.com/science/article/pii/S030439401300437012:20
paperbothttp://diyhpl.us/~bryan/papers2/paperbot/3ef9e4f0d2e739d69575ae60748d3b57.txt12:20
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delinquentmepaperbot, http://adsabs.harvard.edu/abs/2011TRACE..26..371S13:05
paperbothttp://diyhpl.us/~bryan/papers2/paperbot/ab06cfd9608f1aaa768ff8a9c583b0ff.txt13:06
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superkuhpaperbot: http://www.cell.com/fulltext/S0092-8674(13)01360-313:44
paperbothttp://diyhpl.us/~bryan/papers2/paperbot/eaa8588c6fd0cf54dc0a4bc3a85ce4d1.txt13:44
superkuhpaperbot: http://www.sciencedirect.com/science?_ob=GatewayURL&_origin=CELLPRESS&_urlversion=4&_method=citationSearch&_version=1&_piikey=S0092867413013603&md5=1372a5392a55ba9fcde0013ce8caced613:45
paperbothttp://diyhpl.us/~bryan/papers2/paperbot/1e48aabe5b37c65037380b72f45bd07f.txt13:45
superkuhpaperbot: http://www.sciencedirect.com/science/article/pii/S0092867413013603/pdfft?md5=5727a579ed38b46c183779f13c7afeda&pid=1-s2.0-S0092867413013603-main.pdf13:46
paperbothttp://diyhpl.us/~bryan/papers2/paperbot/1eb9a1ba1b00faa5b134c25ecf0c527d.pdf13:46
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kanzurepdfcoin13:47
eudoxiayou mine it by freeing papers from paywalls?13:48
kanzurei dunno. probably something about doi numbers.13:49
nmz787that would be cool13:54
nmz787superkuh: still need those papers?13:56
superkuhI got them.13:58
superkuhThrough paperbot. All requests were 1 paper.13:58
superkuhJust had to dig for the correct URL to proceed to the next stage a couple times.13:59
kanzureeudoxia: i don't think it would work13:59
nmz787superkuh: so I've heard of COX-2 before, but can't place what it's importance is... they sell inhibitors as common drugs14:03
superkuhIbuprofen.14:04
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nmz787hmm, which I don't take often at all, maybe once every year or two14:05
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superkuhThe OTC COX inhibitors are actually non-specific to COX-1 and COX-2. The former being important for the mucosal lining of the stomach. Thus the suggest to take them with food.14:06
superkuhIn this paper they seem to use one of the later generation COX-2 specifics.14:07
superkuh(wherein the first gens had bad heart side effects)14:07
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nmz787the wiki article on retinal detachment said THC could exacerbate... which seems contrary to all the non-scientific buzz about it being good for glaucoma (which I haven't actually found solid evidence supporting that it actually does help the condition)14:11
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superkuhYes. The eye specific interactions have worried me.14:18
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nmz787http://transova.com/our-services/genetic-preservation-cloning.php15:19
nmz787http://www.viagen.com/our-services/cloning.php15:19
nmz787"To clone an animal, ViaGen needs a sample of the animals genes, in the form of an ear punch or small biopsy sample. ViaGen provides a biopsy kit and a shipping container for transport of the biopsy sample to our lab."15:20
nmz787"At our lab we culture the animals cells, then transfer DNA from those cells into eggs from which we have removed the genetic material. We grow the resulting embryos in an incubator for several days, then transfer them to our recipient females using a traditional embryo transfer process. After a normal gestation period, the cloned calves, piglets, or foals are born."15:20
nmz787"Calves are picked up at approximately seven months of age, and foals at 60 days of age. With pigs, pregnant gilts are picked up at 60 days of pregnancy.  All cloned animals are subjected to DNA testing to confirm their identities, and to veterinary examinations to confirm their health status."15:20
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phillyjoo, lots of ppl15:33
phillyjhi all15:33
kanzurephillyj: hi15:34
nmz787hi15:34
nmz787long-time!15:34
phillyjyea15:34
phillyjnmz787: you're on the west coast now?15:35
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nmz787yeah15:39
nmz787Oregon is great, naturally lush, so great bio-wise15:39
nmz787no biotech or bioinformatics work though15:40
nmz787some cancer and medical device companies, but nothing interesting anyway15:40
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nmz787phillyj: what have you been up to?15:45
phillyjusual, working at the same place15:45
phillyjget a trickle of projects, cloning and such15:46
phillyjone of the bigger biotechs in my building went under15:47
phillyjthey're selliing off their equipment15:48
phillyjnot sure if the boss will get anything15:48
phillyjhope there's some cheap stuff15:48
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kanzurephillyj: what equipment is available? do you have storage?15:51
phillyjlots of stuff, centrifuges, freezers15:52
phillyji have to get the list15:52
phillyjstorage space meaning?15:52
kanzureif you can get a picture of the list or type up the actual list, then i'd like to see it15:52
kanzuremeaning if i buy some of it, can you store it or arrange for it to be moved off of their location15:52
phillyji'll have to ask them about it15:53
phillyjbut i guess they'd be happy if you buy stuff15:53
phillyji'm guessing its pretty new equipment because they moved in early this year15:54
phillyjkanzure: there is some space in my lab, it's not too big though and I am not sure if the landlord will let me leave stuff outside the lab for too long15:56
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phillyjkanzure: how interested are you?15:57
kanzure5-10%15:57
phillyjdepending on the equipment? Im in PA btw15:58
nmz787heading to pittsburgh in the next 2 weeks phillyj ?16:00
phillyjnmz787: what?16:00
nmz787are youheading to pittsburgh in the next 2 weeks?16:00
phillyjno16:00
phillyjwhy>16:00
phillyj?16:01
nmz787I am :P16:01
nmz787too far apart too just come hang out in philly16:01
nmz787or vice versa16:01
nmz787unless you had plans already16:01
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nmz787phillyj: do you just do single-cell organism cloning?16:04
nmz787err, you mean cloning cloning, not SCNT16:05
nmz787right?16:05
phillyjo16:05
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phillyjcloning cloning16:05
phillyjlol16:05
phillyjsry16:06
nmz787I was just looking at this http://www.viagen.com/our-services/cloning.php16:06
phillyjyea, we do most basic molecular bio stuff16:07
phillyjlots of plasmid construction, mutagenesis16:07
phillyjor qpcr work if it comes our way16:07
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phillyjkanzure: sent you the equipment list16:15
juri_i don't suppose anyone here is set up to produce DLC via the hot wire method here?16:17
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kanzurephillyj: neato, thanks16:18
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phillyjkanzure: did you see anything interesting in the list?16:36
kanzurediode array or refractometer might be interesting16:37
phillyjthey're not big equipment, right?16:37
kanzurei don't think there's anything on this list i really really want16:38
kanzureis "TMTC" an abbreviation of "too many to count"?16:38
kanzure"Freezer -40C TMTC" ?16:38
phillyjthats what i think16:38
phillyjno16:39
phillyjtheres 1 -4016:39
phillyju went cross-eyed16:39
kanzuredamn16:40
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phillyji might get the gloves, need to order more anyway16:45
kanzurethat sounds exciting16:47
phillyjlol16:47
phillyjmoney is tight16:47
phillyjcan only get essentials16:47
kanzurenah it's cool, protection for employees is BS anyway16:47
phillyjlollol16:47
kanzureand protection for their projects16:47
kanzure"more RNAses from skin contact? sure why not"16:48
phillyjthat company was a big deal, but I heard they had "money mismanagement" at the highest level16:49
phillyjone monday, the parking lot it empty; they just packed up over the weekend16:49
kanzuredefinitely the preferred method of biological waste disposal16:50
phillyj1 to 5 mil in revenue with up to 50 employees16:51
phillyjthe lab folks all probably got laid off16:51
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kanzure"Almost sounds like it would be worth having some sort of software keep their eyes open for CryptoLocker and grab the AES key, if possible, proactively."19:39
kanzure(or just detect cryptolocker in the first place)19:40
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kanzuresilk road timeline http://antilop.cc/sr/20:05
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kanzurelibgen asking for funding: http://genofond.org/viewtopic.php?f=8&t=706122:00
kanzure"The six months have expired and the time has come again to renew the seedbox lease to keep on distributing Library Genesis via torrents. The parameters are the same as before: 3TB x 4 , speed 100-800 Mbps.22:01
kanzure1) the rent cost of the current configuration for six months amounts to $ 950.22:01
kanzure2) the disc space ended at torrent 980 000 and a hardware upgrade is currently contemplated, configurations and prices are being negotiated.22:01
kanzure3) the primary server of Library Genesis is to be upgraded as well. We are considering to take OCZ RevoDrive 3 X2 240G (for database) + several HDD to 4 TB for approximately $ 1000.22:01
kanzuregeeze this is actually cheap22:01
kanzure"We accept: PayPal, YandexMoney, Webmoney, Bitcoin (link on the main page)"22:01
kanzurebitcoin donations have amounted to only 0.0222 wtf22:02
kanzuretheir bitcoin address is 1ENFY4h7ntGZbqwcwpQtXVFJrPnfXRHQLe22:05
kanzurehttp://blockchain.info/address/1ENFY4h7ntGZbqwcwpQtXVFJrPnfXRHQLe "total received: 0.98889322 final balance: 0.48879322"22:07
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--- Log closed Fri Nov 22 00:00:32 2013

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