2014-11-24.log

--- Log opened Mon Nov 24 00:00:00 2014
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ebowdenpaperbot: http://www.ncbi.nlm.nih.gov/pubmed/1565287000:28
paperbotConnectionError: HTTPConnectionPool(host='libgen.org', port=80): Max retries exceeded with url: /scimag/librarian/form.php (Caused by <class 'socket.error'>: [Errno 104] Connection reset by peer) (file "/usr/local/lib/python2.7/dist-packages/requests/adapters.py", line 375, in send)00:29
ebowden:(00:48
ebowdenpaperbot: http://www.biologicalpsychiatryjournal.com/article/S0006-3223%2810%2900497-X/pdf00:49
ebowdenpaperbot: http://www.biologicalpsychiatryjournal.com/article/S0006-3223%2810%2900497-X/abstract00:50
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kanzure.title https://news.ycombinator.com/item?id=865095202:11
yoleauxOn Linux, 'less' can probably get you owned | Hacker News02:11
kanzurepycnopodia helianthoides is dying?02:12
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sheena.title http://www.leevalley.com/en/garden/page.aspx?c=&p=46784&cat=2,212002:19
yoleauxSugar Tester (Brix Refractometer) - Lee Valley Tools02:19
sheenathinking about trying to convert this to use for USG/SP02:19
ebowdenpaperbot: http://www.biologicalpsychiatryjournal.com/article/S0006-3223%2810%2900497-X/abstract02:19
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sheenahttp://www.staples.ca/en/REED-MT-032-Refractometer-0-32-BRIX/product_992089_2-CA_1_20001 local one.. why staples??02:23
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genehackerbecause staples sells office supplies02:40
genehackerhaven't you ever needed to homebrew inkjet ink?02:41
sheenalol indeed02:41
chris_99this may be of interest to some peeps https://www.anfractuosity.com/files/microfluidics/Product%20code_USD.pdf        - microfluidic slides that are around 33$ each02:47
genehackerthey're just mixers?02:50
chris_99mainly yeah02:50
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kanzurehello eudoxia06:41
eudoxiahi06:42
kanzureeudoxia: how much money do you estimate it would take to get cryonics working for a small mammal?06:43
eudoxiakanzure: like a rat, or a dog?06:44
eudoxiahm, i suppose i would look into the costs of Mike Darwin's dog perfusion experiments06:44
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kanzurewere those on his chromachronacryoblog?06:47
JayDuggerGood morning, everyone.06:47
eudoxiai think there was a brief description on his biography articles06:47
eudoxiai think there was a copy of the paper, in HTML, on the alcor website06:48
kanzurewhy dogs though? have rats been done?06:48
eudoxiahttp://www.alcor.org/Library/html/tbwcanine.html06:48
JayDuggerAt a guess, because of the history of perfusion experiments with dog.s.06:48
eudoxiarats are pretty small06:48
eudoxiayou might have problems e.g. cannulating them06:49
JayDuggerDo cooling rates change much across dogs, rats, and humans?06:49
eudoxiaalso, their brains are very small, so when evaluating the perfusion with a CAT scan you have a lower ratio of brain volume to the spatial resolution06:49
JayDuggerAh.06:49
eudoxiaa larger dog brain gives you more, so to speak, room for error06:50
kanzurewell why not just go straight up to a whale?06:50
eudoxiawhale brains don't fit in portable CAT scanners ;>06:50
kanzurehttps://anboswell.files.wordpress.com/2014/11/blue-whale-heart.jpg06:50
eudoxia>A second set of dogs was treated with a simpler protocol, similar to the type used previously in cryonics and still favored by some cryonicists who prefer simpler, less costly perfusion. The period of perfusion was briefer, and the terminal concentration of glycerol was lower. Brain tissue from these animals showed much higher levels of damage.06:51
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eudoxiakanzure: so what do you want to cryopreserve?06:57
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kanzureeudoxia: humans, eventually06:57
kanzureeudoxia: but it is cheaper to not use humans in tests06:57
eudoxiahm eleitl has probably estimated the costs, since he was going to do tests with human cadavers06:58
kanzurewhy would you start with humans??07:01
eudoxiasmall mammals have been done before07:02
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kanzurehuh? i only remember a rabbit brain that didn't quite work after thawing.07:02
eudoxiai guess he didn't want to reinvent the entire history of cryonics07:02
eudoxiawell those dogs survived extremely low temperature hypothermia07:02
kanzurerefs please?07:03
eudoxiai don't know about the rabbit brain07:03
eudoxiaactually i think i vaguely remember that. was that an experiemtn done by CI?07:03
kanzuremay have been a cat brain07:03
kanzureresults were checked based on eeg activity07:03
eudoxiaoh, the Suda experiment07:03
kanzurebetween 7-14 years of storage07:03
eudoxiayeah, the scientist kept it for 7 years and it still had EEG activity07:04
eudoxiathat was in the sixties though07:04
eudoxiaanyways, what i mean is cryonicists have done a ton of experiments and Alcor's current perfusate is the result of all those07:06
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kanzuremaybe i just have unreasonable expectations07:08
kanzurebut07:08
kanzurei would expect things like, once any protocol is figured out for small animals, to run 100s of animals through that protocol07:08
kanzureand also try various numbers of years of storage as well07:09
kanzureand things like "can the mouse researcher reliably pick out which mouse was frozen for a few years?"07:09
kanzureand "do they respond to stimuli in the way that they were previously trained or confirmed to respond?"07:10
eudoxiathat would've been the case had cryonics been a part of mainstream science07:10
eudoxiabut cryonics is more like the AIDS underground: informal, ad-hoc, we do what we can07:10
kanzurehuh?07:11
kanzurebut why is that not in the set of "things that we can do"?07:11
eudoxiathe focus has been less on elementary research than on actually freezing people07:11
kanzureit seems to be totally necessary and pretty cheap07:11
eudoxiai agree07:11
kanzurewell how do you explain eleitl's plans then07:12
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eudoxiaa "best effort with what we know" thing rather than a scientific, thorough search for the ideal perfusion/cryopreservation setup07:13
kanzuredoesn't have to be ideal, just has to work07:13
kanzureand work does not mean "yep it's cold"07:14
eudoxiawell i think the problem of ice-blocking solutions is essentially solved with M-2207:16
eudoxiaexcept for that whole thing where it doesn't reach into myelinated axons07:16
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eudoxiathe specific process of perfusion has evolved through trial-and-error, or at least that's what i got from Darwin's history of cryonics blog posts07:17
eudoxiaie the first perfusions used veterinary cannulae in the neck and gycerol, that's not the case anymore07:17
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kanzurehow can it be trial-and-error without any results?07:18
kanzuredon't mind me, i'm just being grumpy07:20
eudoxiain one of Darwin's history posts he discusses an evaluation where neuropatients are removed at CT-scanned while under liquid nitrogen07:20
eudoxiathere are pictures of the heads and everything07:20
kanzurealso, isn't it a little suspicious that alcor hasn't done these animal projects?07:20
QfwfqDone or published? ;-)07:21
kanzuretotal costs of running animal attempts can get down pretty cheap i bet, like <$10/kg07:21
kanzurethey would have published/publicized them, plus max more would have told me anyway07:21
QfwfqAn initial negative result would be a huge blow to them financially.07:22
kanzurewhy's that? everyone already knows it's a negative result.07:22
QfwfqBecause it reflects on in-use vitrification procedures.07:22
QfwfqI was thinking less 'revival' and more 'preservation'.07:22
QfwfqBut yeah, I haven't studied this at all, ignore me,07:23
eudoxiait would be pretty bad if it turned out, no matter what, brains completely shattered at the microscale07:23
kanzure"no matter what" is a hard thing to show, so they're safe07:24
eudoxiaof course07:24
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kanzure"> libnih is a small library for C application development containing functions that, despite its name, are not implemented elsewhere in the standard library set.07:28
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caternyeah, right07:41
caternjust use glib canonical07:41
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catern"But why not just use glib I hear you ask? Well, glib is a very large library whereas NIH is small and designed for low-level daemons and systems which may be resource-constrained."07:41
catern"Other reasons to use NIH:07:41
caternIt handles garbage collection for you07:41
caternThat's right, you don't need to free memory manually."07:41
caterndoes not compute07:42
kanzurei am not sure how much of this is supposed to be "serious" versus "hint this whole thing is a joke because look at our name"07:42
kanzurea lot of this looks like bullshitting to me: http://wiki.opencog.org/w/CogPrime_Overview#Key_Claims07:43
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kanzure"To work toward adult human-level, roughly human-like general intelligence, one fairly easily comprehensible path is to use environments and goals reminiscent of human childhood, and seek to advance one’s AGI system along a path roughly comparable to that followed by human children."07:44
kanzuredogs don't go through that at all and they come out okay07:44
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kanzurei think that in general any agi plan will have to be based on something that is immune from the author having crazy or wrong theories of mind (often i see proposals based on really strange understandings of how the human brain works)07:50
kanzureso it has to be written in such a way that those types of problems don't get into the plans07:51
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eudoxiaaccording to the opencog people by 2017 we'll have an AGI scientist08:07
eudoxialol :c08:07
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kanzuremore confusion about "diybio just means community labs" http://blogs.plos.org/citizensci/2014/11/24/synthetic-biology-diy-bio/ sigh08:09
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maakukanzure: agi authors don't have to have an accurate model of the human mind09:21
maakuyou just need a workable model. whether that model matches reality of the human brain is immaterial09:21
maakukanzure: regarding your earlier question, non-uploading WBE is equivalent to AGI because you are escaping the problem of "how do we make a human-level intelligence?"09:25
kanzureescaping?09:25
maakuif you want to cut corners and optimize a WBE, you need to know what it is doing so you know what things you can simplify or eliminate09:26
kanzureand to you, non-uploading is cutting corners?09:26
maakuessentially I'm reading your plan as "let's emulate portions of the human brain until we know what it does, and then optimize it"09:26
kanzurei mean, to some extent typing in neuron parameters has to be considered "uploading" at least a little bit heh09:26
maakuor put differently, "let's figure out how to make an artificial general intelligence by studing the only non-artificial general intelligence we know, then implement an optimized version"09:28
maakuis that correct?09:28
kanzureat the moment the blue brain project's strategy is quite literally "let's take 200 computational neuroscience phd postdoc people, read a bunch of papers and type up parameters for different portions of the emulation"09:28
kanzurehmm, well i don't know about the optimization part- i mean, that should come later i think, and not an immediate primary focus of emulation09:29
kanzurebut yes09:29
maakuright well I can't help but draw parallels to the 19th century engineers who tried to create flying machines with wings that flap09:29
maakuit's a reasonable default position -- in absence of anything else, study the one example we have. but the trouble is evolution didn't give us something that is simple to understand, or easy to reduce09:30
maakubut like flying machines, I expect that the first AGI will be built using theory divorced from biology09:30
maakuand in my case I'm convinced we have enough of a framework to start09:31
kanzure"the first agi will be built using theory divorced from agi"09:31
maaku?09:31
maakui don't understand what you're trying to say there09:33
kanzurebtw, i totally reject the "wah evolution did hard stuff" argument. yes it takes effort, so what.09:34
kanzureflapping wings did work, you know.09:36
maakubah building a machine that flys by flapping wings is insanely difficult09:42
chris_99just buy a pigeon it's far easier09:42
kanzureyes it's difficult09:44
kanzuremost of them work for at least a few seconds09:44
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kanzureanyway, is a kite a flying machine? matches a hawk, you know..09:45
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kragenhttp://web.archive.org/web/19980515141315/http://hypernews.org/ it looks like HyperNews did predate Wiki, since it dates from 1994 at NCSA. but I don't think it supported editing existing "pages", just writing new messages09:54
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kragenhmm, it did: http://web.archive.org/web/19961120083549/http://union.ncsa.uiuc.edu/HyperNews/get/hypernews/about.html10:00
kragen" Rather, responses and base articles are maintained by whoever writes them in their own disk space, or responses may be stored on the server of the base article. Unlike news, articles and responses never expire (at least not now - that option will probably be added later) and they may be edited any time after being "posted"."10:00
kragenpresumably that means they were editable through its web interface, as opposed to, say, vi article323.txt10:00
kragenit's sort of ambiguous though10:04
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kragenthis seems to be Mr. HyperNews: https://plus.google.com/+DanielLaLiberte/about10:07
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nmz787_ido we have math people in here?11:13
kanzuresort of...11:13
nmz787_ijust IMed this in ##math: hi! I am wondering about Partial Differential Equations, and how to apply them to find a solution to a set of arcs... where the only constraint is that the arcs cannot cross/intersect11:15
nmz787_ibasically I learned last week how to integrate to find the arc length, but I am interested in finding the arc equation11:16
nickjohnsonHooray! Launched the fan kit! www.arachnidlabs.com/reload-pro/fan-kit.html11:16
nmz787_itotally read that as 'fap kit'11:17
nmz787_inickjohnson: so I saw there are some AD9851 boards on ebay11:17
nickjohnsonnmz787_i: Yup11:17
nmz787_iand even some for the 985411:17
nickjohnsonI hadn't seen the 9854 breakouts11:18
nmz787_inickjohnson: so, they're just less stable? (than say what you aim to build) or they simply lack the detection aspect (and schematics and layout)?11:18
nickjohnsonThe AD9851 is quite antique but reasonably powerful11:19
nickjohnsonWell, they just do signal generation, and they don't have active frontends, so the power output is low, and the control over amplitude and offset is very limited11:19
nickjohnsonAnd no input stage either, yeah11:19
nickjohnsonI'm trying to build a more versatile instrument than just a breakout11:19
nickjohnsonI considered going with the AD9851, but it's only cheaper than the AD9838 if you go for dodgy second sourced PCBs from China :P11:20
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nmz787_inickjohnson: any idea of a sales pricepoint?11:21
nickjohnsonLooks like it's going to be $60USD retail11:21
nmz787_icould that still do bode plots for the whole sig gen freq output range?11:22
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nickjohnsonhm11:23
nickjohnsonNo, you'd need an ADC and/or some analog frontend stuff as well11:23
nickjohnson(Eg, either a fast ADC, or peak and phase detectors and a slow ADC)11:24
nickjohnsonAssuming we're talking about the same breakouts11:24
nickjohnsonDepends on what you're trying to measure, too, you might need more current than the breakout can supply.11:24
nickjohnsonI'm happy to help if you're considering putting together your own board for higher speed frequency plots, though :)11:29
nickjohnsonYou could reuse a good chunk of what I've designed11:29
kragennmz787_i: by coincidence I spent much of the morning trying to teach painters to make arcs using discrete approximations of partial differential equations11:35
kragenwell, artists.  one is a painter11:35
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nmz787_inickjohnson: cool, will talk more later about this11:36
nmz787_ikragen: oh!11:37
nickjohnsonRighto :)11:37
nmz787_ikragen: are you familiar with the DNA double helix?11:37
nmz787_iwhile I wouldn't need a spiral as the solution, the double helix represents two lines/arcs that don't cros11:38
nmz787_icross11:38
chris_99nmz787_i, found some seller in china that makes mixer microfluidic chips for £2111:38
nmz787_ichris_99: for your problem you probably don't have to worry about quality of them too much, so if they work for your purpose and the price point is OK... seems fine11:38
kragennmz787_i: only as much as any random person on the street11:38
nmz787_iquality in the sense that the channels may be rough or something11:39
chris_99yeah i agree, nmz787_i :)11:39
chris_99mmm11:39
kragenbut helices aren't arcs?11:39
nmz787_iI thought they were, but in 3d11:39
nmz787_inot the same pythagorean equation that get's integrated?11:40
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kragenyou can certainly represent helices in a variety of ways that have circles as a special case11:40
nmz787_i(except that the points to calculate distance between would be P(x,y,z) not P(x,y)11:40
kragenlike the vector parametric formula [(a sin t) (a cos t) (bt)]11:41
nmz787_ikragen: I don't actually want helices... if anything it would probably be a sum of sin waves (since that is how you could get 90 turns)11:41
kragenwhich reduces to a circle if b = 011:41
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nmz787_ikragen: http://imgur.com/rBXGE3C11:44
nmz787_ithat would be the simplest example I can think of11:44
nmz787_iyou start with the boundary conditions (2 points on one side which need to connect to 2 points on the other side)11:45
nmz787_iand find the  equations which satisfy equation1 never equals equation211:45
nmz787_i(meaning they never intersect)11:45
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kragennmz787_i: I am unfortunately completely mystified by this conversation and I suspect it may be a terminology problem11:56
kragenthe lines in that picture don't look like arcs, and they don't look differentiable, which means that making them out of partial differential equations is going to be tough11:56
kragenthey look like they are skew, which keeps them from intersecting11:56
kragenbut one of them has a bump in it, which maybe is intended to avoid the other, except that it wouldn't have intersected the other anyway because they're skew11:57
kragenand I have no idea what any of this has to do with double helices or sums of sine waves11:57
nmz787_iskew is accidental thanks to MS Paint11:57
nmz787_iwouldn't the derivative of the black like just be 0?11:58
kragenfurthermore I don't know what a turn is.  are we talking about rotations of an approximate helix here?  Like turns of winding on a transformer?11:58
kragenand what do sums of sine waves have to do with anything?11:58
nmz787_iand that red line could be a sum of sin functions11:58
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nmz787_i(i.e. any square wave)11:59
nmz787_iand yes this is only in 2d11:59
nmz787_iI am not good enough with 3d MS Paint skillz11:59
kragenwhether the derivative of the function represented by the black line would be 0 or not depends on the relationship between the function and the line.  are we talking parametric, PDE, or explicit?12:00
kragenI can't think of any interpretation where the answer is "yes it would be 0" but maybe there is one12:01
nmz787_iumm12:01
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nmz787_ikragen: have you ever done plumbing or made a circuit board ?12:02
kragenI guess if your coordinate system has the X-axis parallel to the black line, which you drew as diagonal, and you're representing it with a function whose value is a 2-vector that gives you the Y and Z coordinates?12:02
kragensure12:03
nmz787_iso essentially the starting two points would be the hot and cold sink faucets, and the other end of the lines I have drawn would be their source connections, say the pipes that come up through the floor in the kitchen12:04
nmz787_iand for some reason the guy who built the house had the hot and cold pipes oriented the wrong way12:04
kragenyou want to do routing?  But with 90 turns?12:04
nmz787_isuch that your tubing had to cross over to connect up right12:04
nmz787_iyeah, so this would be instead of free 3d space, layers routable area12:05
nmz787_ilayers of routable area12:05
nmz787_iso better analogy would be plumbing in the floor below a bathroom/kitchen12:05
nmz787_iwhere all of a sudden you need some pipes to go under or over something (a pipe, a beam that you can't drill through, etc)12:06
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nmz787_iso my idea is define the start and end points for each equation (line), then set the solution constraint such that the individual equation points (any of their x,y,z points) can never equal the points of another equation12:07
nmz787_i90 degrees just because that is what the hardware store commonly sells (and the only drill angle a circuit board can have)12:08
FAMASwhat does the NRA at the channel topic stand for?12:10
nmz787_iNational Rifle Association12:13
nmz787_iWe love our Gene Guns too much12:13
nmz787_ikragen: idk if this is more clear http://imgur.com/WZ2ZbaQ12:13
QfwfqThey stand for sitting.12:14
FAMASQfwfq: ???12:16
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nmz787_ihmm http://blog.wolframalpha.com/2012/04/04/find-arc-length-calculations-for-calculus-with-wolframalpha/12:23
nmz787_i"What about curves in three or more dimensions? One common exercise in a standard calculus course is to find the arc length of a helix. This could be the length of wire needed to form a spring or the amount of tape needed to wrap a cylinder without leaving any gaps. A helix can be expressed as a parametric curve in which the x and y coordinates define a circle, while the z coordinate increases linearly."12:23
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kanzure"We are pleased to announce that the exclusive WuXi EXPLORER Compound Library has shipped to the first BTNB "early access" clients in the US and is now available for wider distribution.  Through this unique collaborative between Wuxi and BTNB, researchers can now access a large, novel and diverse library of screening-ready compounds at a cost-effective price. For pricing information please email us at info@btandb.com with the subject line ...12:52
kanzure... CHEMICAL COMPOUNDS"12:52
kanzure"BTNB sponsor Assay Depot now offers a free research concierge service to BTNB tenants."12:52
kanzure(biotechnbeyond == BTNB apparently)12:53
kanzurehttp://news.sciencemag.org/funding/2014/11/gates-foundation-require-immediate-free-access-journal-articles13:43
kanzure"The Gates Foundation spends about $900 million a year on its global health programs, mostly on research. That results in roughly 1400 research papers a year, 30% of which now appear in open-access journals, according to foundation communications officer Amy Enright."13:43
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nmz787_ipaperbot: http://scitation.aip.org/docserver/fulltext/aip/journal/jap/20/7/1.1698511.pdf?expires=1416866810&id=id&accname=2109439&checksum=985028A38427D3217CEF4D1BAA4F3FF213:51
nmz787_ipaperbot: http://scitation.aip.org/content/aip/journal/jap/20/7/10.1063/1.169851113:52
paperbothttp://libgen.org/scimag/get.php?doi=10.1063%2F1.169851113:52
nmz787_ipaperbot: http://scitation.aip.org/content/aip/journal/jap/15/9/10.1063/1.170749113:53
paperbothttp://libgen.org/scimag/get.php?doi=10.1063%2F1.170749113:53
nmz787_i.title13:54
kanzurewont work13:54
yoleauxnmz787_i: Sorry, that doesn't appear to be an HTML page.13:54
nmz787_ihttp://deepblue.lib.umich.edu/bitstream/handle/2027.42/70754/JAPIAU-15-10-712-1.pdf?sequence=213:54
nmz787_ipaperbot: http://deepblue.lib.umich.edu/bitstream/handle/2027.42/70754/JAPIAU-15-10-712-1.pdf?sequence=213:54
kanzure...13:55
nmz787_ishouldn't it copy papers that are available?13:55
kanzureyep13:55
kanzurebut that's been broken for a while now13:55
kanzuredon't know why13:55
kanzureand nobody fixes things13:55
nmz787_iI think I might as well start my own bot that just tries to download a given URL if 'pdf' in url.lower()13:56
nmz787_isomething I can debug without having to commit to a version control system13:57
kanzurepaperbot2 can be debugged without committing to a version control system13:57
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kanzurepaperbot1 too13:57
kanzure"if 'pdf' in url.lower()" will miss almost every possible case13:57
kanzureyou should just use paperbot213:57
nmz787_iit won't fail if the pdf is available without creds13:58
kanzurei didn't say fail i said miss14:00
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nmz787_imiss? how would it miss it? if I say getPdf www.url.com/somefilename.pdf  how will it miss this?  or how would it miss this ?  http://deepblue.lib.umich.edu/bitstream/handle/2027.42/70754/JAPIAU-15-10-712-1.pdf?sequence=214:15
kanzure"will miss almost every possible case"14:16
kanzure"almost every" does not mean "will miss every case"14:16
nmz787_iwell give an example of one that fails... all my cases thus far wouldn't, so that is not 'almost every'... it would be 'almost none'14:16
kanzureany url that does not have the word pdf in it that returns a pdf14:18
nmz787_iok so then MIMETYPE14:18
kanzuregrep "paperbot: http" hplusroadmap.log14:18
nmz787_ilogbot fail14:20
kanzurehm?14:21
kragenoh, 90-degree turns14:23
kragennot 90 turns of a helix14:23
nmz787_iyes14:24
nmz787_ii am still fleshing this idea out14:24
kragenwrt "arc length": you can calculate the arc length along an arbitrary curve, but that doesn't mean that the curve is an arc in the usual sense of "arc", which is an arc of a circle.  confusing terminology.14:25
nmz787_iah14:25
nmz787_ii meant curvy line14:26
kragenthat clears up much of my confusion :)14:26
nmz787_iI'm gonna ask my calc prof tonight14:26
kragencalculating arc length in the usual way along parametric curves could run into problems if the velocity isn't differentiable14:27
kragenbut if it's piecewise differentiable you can add up the arc lengths of the pieces14:28
nmz787_ihm, I was thinking piecewise might be harder to express as a PDE14:28
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kragenyes14:28
kragenit certainly is14:28
nmz787_isince my idea is to set my start and end locations, then throw that into a PDE solver14:29
nmz787_ibasically14:29
nmz787_iidk if that is correct terminology or feasible14:29
nmz787_ibut it seems like it could be14:29
kragenyour velocity could be differentiable14:30
kragenI mean you could slow down as you get to a 90-degree bend, reaching zero velocity at that point, and then accelerate from there14:30
nmz787_ithey wouldn't have to be perfect 90 degree bends, but that would be how they would be seen from a manufacturing standpoint14:31
kragenI don't remember if that results in problems with the usual arc-length-calculation approach for PDEs14:31
kragenone thing about 90-degree bends is that they mean you're probably going to have large flat plateaus in your solution space14:32
kragenwhere the distance is the same regardless of where you make the bend14:32
kragenthat kind of thing can cause difficulty for things that are looking for an actual minimum-cost solution sometimes14:33
nmz787_ihmm, I don't really care about minimizing distance, just that lines don't intersect14:42
kragenpresumably you want them to stay some minimum distance away from each other14:44
TMAnmz787_i: are the starting points coplanar or arbitrarily positioned?14:48
nmz787_iTMA: a simple example would have them coplanar to begin, but in more complex foms they could be elsewhere14:50
TMAif they are coplanar, for each pair you can just make a |____| connecting path selecting a unique depth of the vertical parts14:50
nmz787_ithis isn't a horrible 3D example http://www.pcb-investigator.com/sites/default/files/blog/images/bd_5.jpg14:52
nmz787_iit's pretty noisy though14:52
TMAoh, it is a PCB routing problem14:53
TMAif it weren't: no need for coplanarity, though: if they are not coplanar find some plane such that parallel projection of them to that plane projects no two on the same point on the plane. then use the previous method.14:55
nmz787_iTMA: not neccesarily PCB routing, could be routing pipes in your house/skyscraper... or fluidic lines on a microfluidic lab-on-a-chip14:57
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TMAnmz787_i: that seems more like a graph problem [look for maximum planar subgraph and start from there] papers such as http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.47.20715:01
nmz787_iTMA: but wouldn't the solution be straight lines? which is not manufacturable for something like a PCB15:03
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nmz787_i(in the sense of changing Z)15:03
nmz787_i(Which needs to happen at 90 degree angles to the planes)15:04
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nmz787_iheh, typo in that paper you just sent, right in the abstract15:07
TMAnmz787_i: you will get the subgraph that is planar -- you can route that subgraph any way you like. no need to use straight lines; the edges that would be left behind can be moved to the second layer (with the same process); the vertical connectors would be only inbetween the layers15:07
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TMAnmz787_i: where?15:09
nmz787_ithe webpage says maxumum15:10
nmz787_ibut the abstract in the PDF has it maximum... so OCR error maybe?15:10
heath"hi Heath? we looked at your resume, we have an vp of engineering position for you." ~"we're a startup doing something others have done, we require you to be in ohio, but we'll give you 3 - 5% equity"15:10
heaths/an/a15:11
heaththat was the shortest call all day15:11
TMAnmz787_i: blimey, I've missed that. It's midnight here in Europe, I should be sleeping already. good night; maybe the graph approach is not the best one. maybe you'd need to come with some novel combination of approaches. I think that it might help to look at it from the angle of graph theory though. http://en.wikipedia.org/wiki/Crossing_number_%28graph_theory%29 or some such15:17
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heathhttp://seclists.org/fulldisclosure/2014/Nov/7415:28
heath"At this point, my best advice would be for users to unset LESSOPEN and15:28
heathLESSCLOSE if set by their distros.15:28
heath"15:28
heath.title http://ntrs.nasa.gov/archive/nasa/casi.ntrs.nasa.gov/20050175884.pdf15:30
yoleauxheath: Sorry, that doesn't appear to be an HTML page.15:30
heath"Foundations of Tensor Analysis for Students of15:30
heathPhysics and Engineering With an Introduction15:30
heathto the Theory of Relativity"15:30
fennsounds more like a textbook than a technical report15:35
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nmz787_iis there a room for bitching about bad software/API? or just bitching in general?16:50
fenn##masochism16:52
fenn(who would want to listen to constant bitching)16:53
nmz787_ithat seems like it would be relatively undirected17:07
nmz787_ii'm thinking something more like ##bitchaboutsoftware17:08
nmz787_iif that existed17:08
nmz787_iand it seems ##masochism is empty17:08
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fenni lied17:12
fenntry ##gullible instead17:12
fennyou could start a blog and accept submissions; i bet it'd be popular. misery loves company17:13
kanzuretumblr?17:13
kanzuretwitter17:14
fenntwitter isn't a blog17:17
fennalso twitter has enough bitching already; there's be too much competition17:17
nmz787_ii wouldn't want other people's crap on my blog17:18
fenni'm intolerant of your intolerance17:19
fenni think my brain is overheating from all this cryptography theory being rammed into it17:20
fennsorry for any weird offense17:21
nmz787_ii just am sad that there don't seem to be good examples or docs for shapely17:22
nmz787_iit has been annoying me all day :/17:22
nmz787_itheir docs seem to make lots of assumptions that users want it for GIS17:23
fennALERT a user is using software for an unintended purpose!17:24
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nmz787_ino, it only uses GIS examples17:26
nmz787_i'Manipulation and analysis of geometric objects in the Cartesian plane.'17:26
nmz787_i'Shapely is a BSD-licensed Python package for manipulation and analysis of planar geometric objects. It is based on the widely deployed GEOS (the engine of PostGIS) and JTS (from which GEOS is ported) libraries. Shapely is not concerned with data formats or coordinate systems, but can be readily integrated with packages that are."17:26
fennwhy aren't you just using an already-existing pcb routing algorithm?17:27
nmz787_ithis isn't for pcb routing17:28
nmz787_iit's for packing shapes onto a drawing17:28
fennnesting?17:31
nmz787_inot sure what you are referring to17:32
* nmz787_i heads to calculus class17:32
fennnesting is for like, cutting cookies out of a sheet of cookie dough17:33
fennenjoy17:33
nmz787_iah, no, adding stuff to a blank drawing canvas17:33
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jrayhawk#yospos or #shsc, maybe17:37
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jrayhawkShe said, "You know what they say the modern version of Pascal's Wager is? Sucking up to as many Transhumanists as possible, just in case one of them turns into God."17:59
jrayhawkhave i mentioned lately that you're all lovely people17:59
fenni will torture your simulation for eternity18:00
jrayhawka most judicious choice, sire18:01
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fenni'm on the turmeric aspirin chocolate ham stack, bro18:20
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heathnmz787: ##defocus18:29
jrayhawki like that stack description18:32
jrayhawki should steal that18:33
jrayhawkwell, other than the aspirin18:33
fenni need an "O" so i can say "TACHO"18:33
jrayhawkolive?18:33
fennyuck18:33
fenn...oseltamvir?18:33
jrayhawkdangerously close to THAC018:34
jrayhawkoleate?18:34
fennhmm i hadn't considered 018:34
jrayhawkomega-3?18:36
fennduh18:36
fennso much for my stack18:36
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maakufenn: sucks to my simulation!20:12
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kanzurehmm20:38
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bbrittainanyone else watching ferguson live streams?21:29
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kanzureno21:30
kanzurewrong channel yo21:30
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kanzurepaperbot should be renamed to papertumor21:51
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bbrittainpshaw, you people should care22:21
bbrittainbut yes, wrong channel22:21
FAMASbbrittain: no need22:22
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Lemminkainenbbrittain what are people supposed to care about now?22:45
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--- Log closed Tue Nov 25 00:00:01 2014

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