| --- Log opened Fri Apr 01 00:00:16 2016 | ||
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| kanzure | .title https://www.youtube.com/watch?v=2aX-0E07Fpg | 06:52 |
|---|---|---|
| yoleaux | Hash Proof Systems, Old and New - YouTube | 06:52 |
| kanzure | .title https://www.youtube.com/watch?v=3EM5lAdAGM0 | 06:52 |
| yoleaux | Bitcoin lightning C implementation test 2016-03-31 - YouTube | 06:52 |
| kanzure | delinquentme: show us nanotube catalysis papers and things | 06:53 |
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| kanzure | fenn: on that topic, i think that the reasoning and arguments shown on the scihub site are actually sort of weak. almost would be better to not say anything at all. | 07:09 |
| kanzure | https://engineuring.wordpress.com/2016/03/11/sci-hub-is-a-goal-changing-the-system-is-a-method/ | 07:13 |
| kanzure | https://engineuring.wordpress.com/2016/02/24/why-sci-hub-is-the-true-solution-for-open-access-reply-to-criticism/ | 07:15 |
| kanzure | "Another article, the link to which I lost, was by a small publisher arguing that Sci-Hub will do harm not to big publishers like Elsevier, but to scholarly societies or non-profits that depend on subscription income. I wonder: what kind of non-profit is that that depends on commercial subscription sales?" | 07:17 |
| kanzure | .... except many non-profits have commercial products, duh. non-profit doesn't mean "no revenue". | 07:17 |
| kanzure | i think she needs someone else to step in and write all of her rhetoric, because she is not good at this part | 07:17 |
| kanzure | https://github.com/BlueBrain/BluePyOpt --- seems to do some sort of evolutionary search optimization and parameter tuning things for neural network simulations | 07:29 |
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| kanzure | https://github.com/BlueBrain/deap | 07:54 |
| kanzure | "DEAP is a novel evolutionary computation framework for rapid prototyping and testing of ideas. It seeks to make algorithms explicit and data structures transparent. It works in perfect harmony with parallelisation mechanism such as multiprocessing and SCOOP." | 07:54 |
| kanzure | what? | 07:54 |
| kanzure | "Optimisation of a Neocortical Layer 5 Pyramidal Cell" https://github.com/BlueBrain/BluePyOpt/blob/master/examples/l5pc/L5PC.ipynb | 07:54 |
| kanzure | "NeuroM is a Python-based toolkit for the analysis and processing of neuron morphologies" https://github.com/BlueBrain/neurom | 07:55 |
| kanzure | https://github.com/BlueBrain/eFEL | 07:56 |
| kanzure | "The Electrophys Feature Extraction Library (eFEL) allows neuroscientists to automatically extract features from time series data recorded from neurons (both in vitro and in silico). Examples are the action potential width and amplitude in voltage traces recorded during whole-cell patch clamp experiments." | 07:56 |
| kanzure | blue brain project is using nixos | 07:56 |
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| kanzure | "Simulator optimized for large scale neural network simulations" https://github.com/BlueBrain/CoreNeuron | 08:00 |
| kanzure | .... right .. https://github.com/BlueBrain/RESTBridge/blob/88926484f2a49facdb9b006b3bd49da6d3551a6b/.travis.yml#L21 | 08:07 |
| kanzure | "neuroscience-related unit tests" https://github.com/BlueBrain/neuronunit | 08:08 |
| kanzure | "Features tested: voltage threshold: the upper limit of the threshold for dendritic spike initiation (an expected somatic depolarization at wich step like dV/dt increase occur) proximal threshold distal threshold degree of nonlinearity at threshold suprathreshold degree of nonlinearity peak derivative of (somatic voltage) at threshold peak amplitude of somatic EPSP time to peak of somatic EPSP degree of nonlinearity in the case of ... | 08:08 |
| kanzure | ... asynchronous inputs (A. Losonczy and J. C. Magee (2006) Neuron, 50: 291-307)" | 08:09 |
| archels | kanzure: the older posts on Elbakyan's blog are much more interesting | 08:09 |
| kanzure | hm? show.. | 08:09 |
| archels | https://engineuring.wordpress.com/ | 08:09 |
| archels | 3rd and down | 08:09 |
| kanzure | this is from when i met her at harvard https://engineuring.wordpress.com/2010/06/14/mind-implants-or-how-to-expand-consciousness-using-new-technologies/ | 08:10 |
| kanzure | a rather long general intro to cryonics http://waitbutwhy.com/2016/03/cryonics.html | 08:18 |
| kanzure | https://petertodd.org/2016/btcc-funding | 08:28 |
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| kanzure | "A Bitcoin Standard: Lessons from the Gold Standard" http://www.bankofcanada.ca/2016/03/staff-working-paper-2016-14/ | 08:59 |
| kanzure | "Agile in-litero experiments: how can semi-automated information extraction from neuroscientific literature help neuroscience model building?" http://infoscience.epfl.ch/record/215862/files/EPFL_TH6809.pdf?version=1 | 09:11 |
| kanzure | "An integrated NLP model is designed to automatically extract brain region connectivity statements from very large corpora. This system is applied to a large corpus of 25M PubMed abstracts and 600K full-text articles. Central to this system is the creation of a searchable database of brain region connectivity statements, allowing neuroscientists to gain an overview of all brain regions connected to a given region of interest." | 09:11 |
| kanzure | "The database is evaluated by neuroanatomists on real connectomics tasks (targets of Nucleus Accumbens) and results in significant effort reduction in comparison to previous manual methods (from 1 week to 2h)." | 09:12 |
| kanzure | "... and find over 500K unique neuron type mentions" | 09:12 |
| kanzure | "Physically-based in silico light sheet microscopy for visualizing fluorescent brain models" http://infoscience.epfl.ch/record/215873/files/1471-2105-16-S11-S8.pdf?version=1 | 09:14 |
| kanzure | check out page 9 figure 6 | 09:14 |
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| nmz787_i | yo | 16:07 |
| kanzure | hi | 16:07 |
| nmz787_i | sup | 16:07 |
| nmz787_i | bitcoin transactions went through sometime later that night | 16:08 |
| nmz787_i | or the next morning, i'm not sure | 16:08 |
| nmz787_i | lesson learned, don't pay uncharacteristically-low transaction fees | 16:08 |
| nmz787_i | also, why isn't there anyone local interested in home-brew microfluidics/DNA | 16:09 |
| nmz787_i | this DIY thing is starting to become isolating | 16:09 |
| nmz787_i | also, I ordered one of those diyoupcb laser head kits | 16:11 |
| nmz787_i | so now I just have to figure out how to get it jammed above this XY gantry, and see if I can hook things up to grbl | 16:12 |
| nmz787_i | but that kit can control all 3 lasers in the optical head, as well as report autofocus values, and drive the focus coils | 16:13 |
| kanzure | you could whore yourself out to the homebrew microelectronics people since the equipment is basically the same | 16:14 |
| kanzure | instead of talking about fluidics talk about electron flow or something, you'll blend in | 16:14 |
| nmz787_i | I think they'll catch on too soon, with the biotech equipment strewn about | 16:15 |
| kanzure | actually i'm not so sure | 16:15 |
| nmz787_i | I think I need to just start having kids ASAP | 16:16 |
| nmz787_i | and in ~5 years they can start doing things for me | 16:16 |
| nmz787_i | my own 'great wall of science (focused towards microfluidics and DNA)' | 16:17 |
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| kanzure | who wants to tell nmz787 that he can get labor-capable 5 year-olds without waiting 5 years? or how long do you think it will take him to realize his mistake. | 16:53 |
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| wrldpcmbl | Heh | 17:48 |
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| maaku | nmz787 thinks a five year old child is going to do what he says hahahaha | 21:50 |
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| --- Log closed Sat Apr 02 00:00:17 2016 | ||
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