2016-06-23.log

--- Log opened Thu Jun 23 00:00:37 2016
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archels_"*existence* characterizes the constitutive preconditions under which something is real and factually present in the world, as an individuated entity open to possibilities and risks; *essence* defines the necessary preconditions under which something can be identified as itself, something that is what it is and does what it does."01:42
archels_why do I even read philosophy papers, I wonder sometimes01:42
archels_(re mind uploading)01:43
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kanzurearchels_: probably some form of masochism07:12
kanzure"NASA, in partnership with the nonprofit Methuselah Foundation’s New Organ Alliance ... Vascular Tissue Challenge offers a $500,000 prize to be divided among the first three teams that successfully create thick, metabolically-functional human vascularized organ tissue in a controlled laboratory environment"07:14
kanzurehttp://click.icptrack.com/icp/relay.php?r=26063973&msgid=597011&act=UV6P&c=1349553&destination=http%3A%2F%2F%2520https%3A%2F%2Fneworgan.org%2Fvtc-prize.php07:14
kanzureidfjdsaoifajfdoiqfq07:14
kanzurefuck 'em07:14
kanzurehttps://neworgan.org/vtc-prize.php07:14
kanzurehttp://www.nasa.gov/vtchallenge07:14
kanzureha/eww "An introduction to BioJavaScript – a growing library of JavaScript modules to represent biological data on the web"07:15
kanzurejune 28 in boston "single-cell genomics" conference thingy http://www.festivalofgenomicsboston.com/single-cells-genomics/07:16
kanzureand the next day, "Single-cell whole transcriptome analysis of human brain stem cells", "Learnings from pooled screening and target validation using CRISPR", "The current state of the CRISPR toolbox: From libraries to effectors", "Think big, screen once: genome scale editing with high diversity libraries"07:18
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archels_that canonical microcircuit paper was terrible, by the way07:21
archels_we don't really know how the cortex works07:21
archels_that is to say—there is a large disconnect between single-neuron and circuit-level understanding, and understanding at an abstract level such as "it's doing top-down and bottom-up integration"07:22
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kanzurearchels_: hm? the paper was not discussing single-neuron characterization AFAIK.07:28
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archels_yes, it's more about network function, and what the network might be doing ("computing"?)07:32
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archels_.title https://www.youtube.com/watch?v=tf7IEVTDjng08:26
yoleauxIntroducing SpotMini - YouTube08:26
archels_cutie08:26
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kanzure"Long-term Planning Committee for the Human Race" '...also a Kafkaesque entry'10:05
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chris_99Just got my diffraction gratings today :)  I'm looking into clamps that have a screw-in-base, so i could possibly screw them into metal frame11:19
nmz787_ii printed that labjack but it failed to open because the orientation or too much support inside11:23
chris_99awh :(11:23
nmz787_ithe screw and bolt-hole-piece worked surprisingly (after they were broken free of everything else)11:24
nmz787_ithe threads were ugly, but it screwed (though the screw itself was hollow and splintered when I first was trying to open the jack)11:25
nmz787_istarted printing again with different orientation and settings11:25
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chris_99good luck11:26
nmz787_iactually I am getting different print results in this room than when I had it on my kitchen table a few weeks ago... I think it was hotter then too11:31
nmz787_ione side peeled up last print and this print11:31
nmz787_ianyone here ever play with SAT solvers?11:31
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kanzureblerp13:29
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nmz787_iskibidibeebop13:58
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kanzureway worse than that14:07
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nmz787_ihttps://github.com/google/or-tools/blob/master/examples/python/discrete_tomography.py14:18
nmz787_isteep learning curve on that ~100 lines :D14:19
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delinquentmekanzure: im here to nanotube ... who was working on CNT work ?16:34
kanzuregenehacker, probably16:34
kanzurelet me see if he's still alive16:34
kanzurehe has been summoned16:35
kanzurealso the various users of VASP..16:36
delinquentmeVASP ? https://en.wikipedia.org/wiki/Vienna_Ab_initio_Simulation_Package ?16:37
kanzureya16:38
kanzurealso you can plunder my old collection http://diyhpl.us/~bryan/papers2/carbon-nanotubes/16:38
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kanzuredelinquentme: geneh^17:20
kanzuregeneh: what's new/old?17:20
delinquentmegeneh: you around?17:20
delinquentmenice !17:20
genehNot much17:20
delinquentmegeneh: kanzure said you're working on some carbon nanotube stuff.17:20
genehNope17:20
delinquentmeIm in a holding pattern right now on some of my own17:20
genehI work on MOFs17:21
delinquentmeOH. I dont even know what that is17:21
kanzurenope i said geneh probably knows about CNT things17:21
delinquentmeOHHHHH17:21
delinquentmeiz true geneh ?17:21
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genehMaybe?17:23
delinquentmeSo my initial proposal to the Molecular Foundry was denied under the grounds that I was unaware of how complex actuating individual CNTs actually are17:25
delinquentmeI think this is probably somewhat difficult ... but not actually something thats say ... *weeks* of work17:26
delinquentmethoughts?17:26
xentracnmz787_i: I didn't know you worked for Norsam17:27
xentracapparently there's a mass market: http://www.democratandchronicle.com/story/money/business/2013/12/06/nanorosetta-uses-tech-to-fit-entire-bible-on-pendants/3894311/17:27
genehWhat are you trying to do?17:29
genehAlso any of you know people who work at madeinspace?17:30
kanzurenope. should i try to fix this?17:31
delinquentmegeneh: im trying to orient 2 CNTs co-axially with the intent of annealing them w atomic perfection17:32
genehThat is really really hard17:32
delinquentmeyes i know the perfection part is worrysome but this protocol has already been proven without it ...17:32
delinquentmesimply by *viewing them* with a sufficiently energetic / resolved SEM17:32
genehYeah that17:32
genehWhy?17:32
delinquentmealso i've got liek 6 other possible protocols to try to make atomically perfect CNTs17:33
delinquentmegeneh: if i can make pounds of the stuff i have a killer app :D17:33
kanzurejoining?17:33
delinquentmegovernment would by the shit up lik woah.17:33
genehWhich is?17:33
delinquentmeunder NDA on that17:33
delinquentme=]17:33
kanzurejoining.17:33
delinquentmekanzure: what :D ?17:33
kanzureit's your "joining CNTs together" proposal17:33
genehhttp://m.phys.org/news/2016-06-power-co2-emissions-carbon-nanotubes.html17:34
genehSo you want cheap carbon nanotubes17:34
genehYou want to make a space elevator17:35
delinquentmekanzure: what is ? The killer app ? No.17:35
genehSo how are you going to line them up?17:35
kanzurewho is phenolphtalein17:37
delinquentmegeneh: AFM17:37
genehHere is what made in space is working on17:37
genehhttps://medium.com/made-in-space/how-we-want-to-turn-asteroids-into-spacecraft-e95d3214d787#.icv7eukoq17:37
delinquentmeit was my understanding , as well as a claim from another MolFoundry scientist that an Asylum AFM had the capacity to push individual CNTs around17:37
genehThat sounds incredibly time consuming17:38
delinquentmegeneh17:38
genehOh wait really17:38
delinquentmeall totally automateable as well.17:38
genehI'm not so sure about that17:39
genehI'm not so sure that you'd be able to get the precision to do that17:39
genehNo17:39
genehAnd I don't think it will scale17:40
delinquentmegeneh: my logic on it is that the shapes are very rudimentary and with the correct substrate linearization  protocol17:40
delinquentmethey'd all be of aligned and non-stacked17:40
delinquentmeNOW. determination of width .. could be another consideration17:40
delinquentmeand for atomic perfection that needs to be handled17:40
genehWhat about matching chirality?17:41
delinquentmegeneh: i have a STM on my desk that takes of 3in^317:41
delinquentmei dont buy that it wont scale17:41
delinquentmechirality can be sorted spectroscopically prior to linearizing17:41
nmz787_ixentrac: yeah, if you have potential business please send it my way17:42
genehNot to mention that when nanotubes are annealled by electron beams you tend to get defects17:42
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genehHow much of nanotube product are you making17:43
nmz787_igeneh: maybe defects of some % are tolerable?17:43
nmz787_ijust limit the strength?17:43
delinquentmegeneh thats all depending on the power of beam17:46
delinquentmealso!17:46
delinquentmegeneh17:46
delinquentmeyou'd be interested to know I also submitted protocols for what I've referred to as "ironing out" of defects17:46
delinquentmeapparently with the right catalyst one can push defects along the length of a CNT17:46
genehAlso on how accurately can align them17:46
xentracnmz787_i: do you have a ballpark on costs?17:47
delinquentmeso theres a possibility that if the joint has defects ... then then can be pushed away from the center17:47
xentracI would have thought they'd be too high for the mass-market thing17:47
delinquentmegeneh: piezos are sub angstrom17:47
genehAs long as you are continously scanning from what I understand17:48
genehAlso supposedly our lab group has an asylum17:48
nmz787_ixentrac: shop rate is $375/hr... but they are flexible with initial development talks and sometimes proof-of-concept if its quick enough17:49
xentracbecause it's driven so many researchers insane, geneh?17:49
xentracnmz787_i: is it possible to do a thing in an hour?  the article I linked claimed that a Bible was four minutes17:49
xentracbut presumably there's like setup time or something17:50
genehNo an asylum microscope, they're a scope company17:50
kanzureoh the AFM17:50
nmz787_ixentrac: depends on what the starting material is, how much detail, if you need to break vacuum to change positions or etch or coat or clean, pre-processing, post-processing...17:51
xentracnmz787_i: interesting17:52
genehDelinquetme, manipulating stuff on the nanoscale is still very hard17:53
genehEven manipulating stuff on the microscale is hard17:53
xentracthat's why it's so hard for me to masturbate!17:54
delinquentme^^^ i know the feel man17:54
genehSee the whole boondoggle with 3d chips17:54
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nmz787_ilol18:07
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nmz787_ixentrac: actually I can use Norsam facilities, they have a FIB that is finicky that we recently installed a DB9 feedthrough on for me to test x-ray detectors with18:09
nmz787_ixentrac: we have a fume hood, sputter coaters, plasma cleaners, spin coater, optical microscopes18:10
Kryptus_Frostspoiled much?18:11
Kryptus_Frostlol18:11
nmz787_iKryptus_Frost: unfortunately I lack time, and too vast and numerous projects18:12
nmz787_iI lack lackies18:12
nmz787_ilackeys18:12
nmz787_isubordinates?18:12
nmz787_itechnicians18:12
nmz787_ipartners even18:12
Kryptus_FrostI hear that18:13
nmz787_i!teammates18:13
xentracnmz787_i: that sounds super awesome18:13
xentracyou need more robot lackeys18:13
Kryptus_Frost3d printed assistants18:13
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kanzure"Automated design of flexible linkers for MOFs" http://diyhpl.us/~bryan/papers2/chemistry/metal-organic-frameworks/Automated%20design%20of%20flexible%20linkers%20for%20MOFs%20-%20Manion%20-%202015.pdf18:17
doclMade in Space is awesome18:17
CuriousCatwhere are you guys doing nanofabrication? is it in a university lab?18:17
kanzurewhere ever we want18:19
xentracI don't think any of us are successfully doing nanofabrication yet, CuriousCat :)18:19
CuriousCatok18:19
CuriousCatbecause it would probably be very expensive to do so18:20
CuriousCatunless you work at a university or a corporation that does it18:20
CuriousCati've heard of 'biohacker spaces' but not 'nanohacker spaces'18:20
kanzurethe name is not important18:21
CuriousCati was thinking more along the aligns of conventional mems/semiconductor processes, maybe mixed with some bottom-up processes18:21
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nmz787_iyay for http://labix.org/python-constraint18:58
nmz787_i.title18:58
yoleauxpython-constraint - Constraint Solving Problem resolver for Python18:59
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kanzure"The Brain Forum 2016, held recently in EPFL Lausanne, Switzerland, welcomed 1400 visitors"19:12
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kanzurehttp://thebrainforum.org/annual-conference/the-2016-conference19:13
kanzure"moo-ming poo, china brain science project"19:14
kanzure"christof koch, allen brain institute"19:14
kanzurehttps://mcb.berkeley.edu/labs/poo/research/researchindex.htm19:15
kanzure"International brain projects proposed" http://science.sciencemag.org/content/352/6283/27719:17
kanzurekavli foundation seems to be funding a bunch of this...19:17
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